KEGG   Myotis davidii (David's myotis): 102755652
Entry
102755652         CDS       T02992                                 
Symbol
SEH1L
Name
(RefSeq) SEH1 like nucleoporin
  KO
K14299  nucleoporin SEH1
Organism
myd  Myotis davidii (David's myotis)
Pathway
myd03013  Nucleocytoplasmic transport
myd04150  mTOR signaling pathway
myd05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:myd00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102755652 (SEH1L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    102755652 (SEH1L)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102755652 (SEH1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:myd03019]
    102755652 (SEH1L)
   04131 Membrane trafficking [BR:myd04131]
    102755652 (SEH1L)
Messenger RNA biogenesis [BR:myd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102755652 (SEH1L)
Membrane trafficking [BR:myd04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    102755652 (SEH1L)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 WDR55 Beta-prop_EIPR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 102755652
NCBI-ProteinID: XP_006763313
LinkDB
Position
Un
AA seq 360 aa
MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSP
MIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSYHILAI
ATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDG
CVRLWKANYMDNWKCTGILKGNGSPVNGSTQQGNPNPSLGSSIPNLPNSLNGSSAGRKHS
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgtttgtggcacgcagcatcgcggcggaccataaggatctcatccatgatgtatctttc
gatttccacgggcggcggatggcgacctgctctagcgaccagagcgtcaaggtctgggat
aaaagtgaaagtggagattggcattgtactgctagctggaagacacatagtggatctgtg
tggcgtgtgacatgggctcatcctgaatttggacaggttttggcttcctgctcttttgac
cgaacagctgctgtttgggaggaaatagtaggagaatcaaatgacaaactgcgaggacag
agtcattgggttaagaggacaacgctagtggacagcagaacatctgttactgatgtgaaa
tttgctcctaagcatatgggtcttatgttagcaacctgttcagcggatggtattgtaaga
atatatgaggcaccagatgtcatgaatctcagtcagtggtctctgcagcatgagatctca
tgtaaactaagctgtagttgtatttcttggaacccttcaagctctcgtgctcattccccc
atgatagctgtaggaagtgatgacagtagtccaaatgcaatggccaaagttcagattttc
gaatataatgaaaacaccaggaaatatgcaaaagctgaaaccctcatgacagttactgat
cctgtccatgatattgcatttgctccaaacctgggaaggtcttaccacattctggccata
gcaaccaaagatgtgagaatttttacattaaagcctgtgaggaaagaacttacttcctct
ggtggaccaacaaaatttgaaattcatatagtggctcagtttgataatcataattctcag
gtttggcgagtgagttggaatataacaggaacagtgctagcatcttcaggtgatgatggc
tgtgtaagattatggaaagctaattatatggacaattggaagtgtactggcattttgaaa
ggtaatgggagccctgtcaatgggagtactcagcagggaaacccaaatccttccctaggt
tcaagtatcccaaatcttccaaattcattaaatggatcttctgctggcagaaagcacagc
tga

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