Myotis davidii (David's myotis): 102760181
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Entry
102760181 CDS
T02992
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
myd
Myotis davidii (David's myotis)
Pathway
myd03082
ATP-dependent chromatin remodeling
myd04714
Thermogenesis
myd05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
myd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102760181 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102760181 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102760181 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myd03021
]
102760181 (SMARCC1)
03036 Chromosome and associated proteins [BR:
myd03036
]
102760181 (SMARCC1)
Transcription machinery [BR:
myd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102760181 (SMARCC1)
Chromosome and associated proteins [BR:
myd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102760181 (SMARCC1)
PBAF complex
102760181 (SMARCC1)
GBAF(ncBAF) complex
102760181 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
102760181
NCBI-ProteinID:
XP_015423747
LinkDB
All DBs
Position
Un
AA seq
1095 aa
AA seq
DB search
MALFPGLWEPYSIARIQLATRESQEGPDSIEEGDGPPLRQRACRPWVTLSTPGLGGPRRS
AGILPVLSPVSALQYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVANPAFTKLPAKCFMD
FKAGGALCHILGAAYKYKNDQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPNIY
LIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPHPSSQEDEEWLRPVMRKDKQLLV
HWGSYPDSYDTWVHSNDVDAEIEEPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENR
KPVSFRQRISTKNEEPVRSPERRDRKASASARKRKHSPSPPPPAPTESRKKSGKKGQAGL
YGKRRSQKEEEEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQ
DEETVTTGGKEDDDPSKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRAL
PEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQ
WGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLSFPEKNKE
KPIDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPEEPE
KPEGAEEEKMETEADGQQPEKAENKGENETDEGDKAQDGDNEKSSEKEQDNEVSEDIKSE
ETESEENKELTDTCKERESEIGKKKVEREISEGNVATAAAAALASAATKAKHLAAVEERK
IKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQSFHMEQLKYAE
LRARQQMEQQHGQNPAQGHQHPGGAGLAPLGAAGHPGXPLMQHQMPPPHPPQPGQIPGPG
SMMPGQPLPGRMIPSVAASIHPPGSGPAPAGMPPMPGSILGPRVTLTAPNGMYPPPPADG
VPPPPAPGPPAPAAP
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggcactcttcccgggactgtgggagccgtacagcatcgctcgcattcagttggccaca
cgtgagtcacaggagggccctgattctatagaagagggcgatggtccccctttacggcag
agagcttgtcggccgtgggtaaccctgtccacgccagggctcggggggcccaggaggtcg
gcgggcattctcccggtgttgagccctgtctctgccttgcagtacgtccacgcggatgcg
cccaccaacaagacgctggctgggctggtggtgcagctcctgcagttccaggaagatgcc
ttcgggaagcacgtcgccaacccggccttcaccaagctcccggcgaaatgtttcatggat
ttcaaggctggaggcgccttgtgtcacattctcggggctgcgtacaagtacaagaatgac
cagggctggcggaggtttgatctacagaatccatcccgaatggatcgtaatgttgagatg
tttatgaatattgaaaaaacattggtgcagagcaattgcctgaccagacccaacatctac
ctcattccagacattgacctgaagttggctaacaaattgaaagatattatcaaacgacat
cagggcacattcactgacgagaagtcgaaagcttcccaccacatttacccacatccttcc
tcacaagaggatgaggagtggctgcggcccgtgatgaggaaggacaagcagctgctggtg
cactgggggtcgtacccggacagctatgacacgtgggtccacagcaacgatgttgatgcg
gaaattgaagagccacccattccagaaaagccgtggaaggttcatgcaaagtggattttg
gacactgatgtgttcaatgaatggatgaatgaggaggactatgaggtggatgagaacagg
aagcccgtgagttttcgacagcgaatttcaacaaagaatgaagagccagtcagaagcccc
gagagaagagacaggaaggcatcagcgagtgctcggaagaggaagcactcgccctccccg
ccaccccccgcgcccacagagtcccggaagaagagcgggaagaaaggccaagctggtctc
tatgggaagcgcaggagtcagaaggaggaagaggaacaggaagacctcaccaaggacatg
gaggaccccacacctgtgcccaacatcgaggaagtggtgctccccaaaaacgtaaatcca
aagaaagatagtgagaatacacctgttaaaggaggaactgtagccgatctagatgagcag
gatgaagagacggtcacaacaggaggaaaggaagatgatgaccccagcaaaggtgatcag
agtcggtcagtggaccctggtgaagataacgtaaccgagcagaccaatcacatcatcatt
ccgagctacgcatcctggtttgattataactgtattcacgtgattgaacggcgtgctctt
cctgagtttttcaatgggaaaaacaaatccaagactccagagatatacttggcttatcga
aattttatgattgacacatatcgcctgaacccccaagaatatctgaccagcaccgcttgt
cggaggaacttgactggcgacgtgtgtgctgtgatgagggtccacgccttcctagagcag
tggggccttgttaactaccaagtggacccggaaagccggcccatggcgatgggacccccg
cctacgccccacttcaacgtgctggctgacaccccctctgggctggtgcctctacacctt
cgatcccctcaggttcctgctgctcagcagatgttaagttttcccgagaagaacaaggaa
aaaccgattgatctgcagaactttggtctccgtactgacatttactccaaaaaaaccttg
gcaaagagtaaaggtgccagcgctggacgggagtggacggagcaagagacgctgctgctg
ctggaggccctggaaatgtacaaggacgactggaacaaggtgtcggagcacgtgggcagc
cgcacgcaggacgagtgcatcctgcacttcctgcggctgcccatcgaggacccatacctg
gagaactcggacgcctccctggggcccctggcttaccagccggtccccttcagccagtca
ggaaaccccgtcatgagcacagtagccttcctggcatcggtggtggaccctcgagtggca
tctgctgcagctaaagcggctctggaggagttttctcgggtccgggaggaggtgcccctg
gaactggtggaagctcatgtcaagaaagtgcaagaagcagcccgagcctctgggaaagtg
gaccccacctacggcctggagagcagctgcattgcgggcacgggccccgaggagccggaa
aagcctgaaggagctgaagaggaaaaaatggaaacagaagctgatggtcagcagccggaa
aaggcagaaaacaaaggggaaaatgaaacggatgaaggtgataaggcccaagatggagac
aatgaaaaaagcagcgagaaggaacaggataatgaagttagtgaggatatcaagtcagag
gaaacggagtctgaggagaacaaggaactcactgatacttgtaaagaaagagagagcgaa
attgggaagaagaaagtagaacgtgagatttccgaaggaaacgtagccacggccgccgca
gctgctctcgcctcagctgccaccaaagccaagcacctggctgcggtggaggagaggaag
atcaagtccctggtggcgctcctggtggagacgcagatgaagaagctggagatcaagctg
cggcacttcgaggagctggagaccatcatggaccgagagaaggaggccttagagcagcag
aggcagcagctgctcactgaacgccagagcttccacatggagcagctgaaatacgcggag
ttgcgagcccgccagcaaatggagcagcagcacgggcagaaccctgcccagggccaccag
cacccggggggcgcgggcctggcgccgctgggagcagcagggcaccccggcntccctctg
atgcagcaccagatgccgccgccccacccgccccagccaggtcagatcccaggcccaggt
tccatgatgcccgggcagcccctgccaggccgcatgattcccagtgtcgccgccagcatc
cacccccccgggagtggccccgcccctgctgggatgccgccaatgccaggaagcatccta
ggaccccgggtcaccctcacggcccccaacggcatgtatccgccgccgcctgcagacgga
gtccctccgcctcctgctccgggcccacccgccccggccgcgccctag
DBGET
integrated database retrieval system
