Myotis davidii (David's myotis): 102768117 Help Entry 102768117         CDS       T02992                                  Symbol XRN1 Name (RefSeq) 5'-3' exoribonuclease 1   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism myd  Myotis davidii (David's myotis) Pathway myd03008   Ribosome biogenesis in eukaryotes myd03018   RNA degradation Brite KEGG Orthology (KO) [BR:myd00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     102768117 (XRN1)   09123 Folding, sorting and degradation    03018 RNA degradation     102768117 (XRN1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:myd03019]     102768117 (XRN1)    03009 Ribosome biogenesis [BR:myd03009]     102768117 (XRN1)    03016 Transfer RNA biogenesis [BR:myd03016]     102768117 (XRN1)    03036 Chromosome and associated proteins [BR:myd03036]     102768117 (XRN1) Messenger RNA biogenesis [BR:myd03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      102768117 (XRN1)   mRNA degradation factors    5'-3' decay     5' exonucleases      102768117 (XRN1) Ribosome biogenesis [BR:myd03009]  Eukaryotic type   Pre-60S particles    RNases     102768117 (XRN1) Transfer RNA biogenesis [BR:myd03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     102768117 (XRN1) Chromosome and associated proteins [BR:myd03036]  Eukaryotic type   Gene silencing    piRNA pathway     102768117 (XRN1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_N XRN_M XRN1_D2_D3 XRN1_D1 SH3_12 Dicer_dimer Motif Other DBs NCBI-GeneID:  102768117 NCBI-ProteinID:  XP_006757569 LinkDB All DBs Position Un AA seq 1728 aa AA seqDB search MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE TLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHK IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQRVCA PEETTFHLLHLSLMREYIDYEFSVLKDKIPFKYDIEKIIDDWILMGFLVGNDFIPHLPHL HINHDALPLLYGTYITILPELGGYINENGYLNLPRFEKYLVKLSDFDREHFSEVFVDLKW FESKVGNKYLNEAAGVAAEEARNYKEKKKSKGQENSICWAALDKNREEAVTSKDHLEDET EEDDLFETEFRQYKRTYYMTKMGVDIVSDDFLADQAACYIQAIQWILHYYYHGVQSWSWY YPYHYAPFLSDIRNISTLKIHFELGKPFMPFEQLLAVLPAASKNLLPTCYQHLMTSEDSP IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM CWYDRDTEFTYPSPWPEKFPAIERCRTRYKVISLDAWHVDISKNKITRVDQKALYFCGFP TLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVNAESDELSVENVASLVLGKSVFVNWP HLEEARVVGISDGETKFYLEEPPGIQKLYLGRTVPPSKVVHLGEKEQSNWAKEVQGISEY YLRRKGIIINETSAVVYVQLLTGHRYQINQNGEVRLEKQWSKQVLPFVYQAVVKDIRAFD SRFSNIKTLDDLFPPRSMVFMLGTPYYGCAGEVQDSRDVITEGRIRVVFSIPCEPNLDAL IQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFN KKNEEVPGYTKKVGNEWMYSSATEQLLAEYIERATXLFSYIAKNSQEDVFYEDDIWPGEN ENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAVVEKIEEEVEKYKQRKNNKKVRVTV KPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVREDFSVPVGLRGTVIGIKGANREADVLF EVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSYGSRSETGNQKLTAIVKPQPAVNHYSL NSSVSSGHLGGLNHSPQSLFVSTQVPTKDDDEFCNIWQSLQGSRKVQHFQPTLQEKGAVL PQEVTQHHKSGLNDNSIKCQQRKHEPHRKFKEECRSPKTESWSQKMSNNQTFGRPGKCNN TKLLKRNESTEVSENQKFRTGYPKTVDKPNTGFEDFLASLNISREKEAQSSHEEPPREEH WSPQSFAMKGTRMLKEILKIDGSGSVDHKNEMKQFGNEVIVSCNRRDEYGPSSQPKQNEK LTSYVNKPQSASEYHHVRSIDNVCWPASSQIPPVSTPVTELSKICSLIGMPQPDFSFLRT PQTMIVCQVKLPNGLLVHGPQCHSEEEAKDKAALFALQQLGSLGMNFPLPPPIFANYPPA VPPGTIPPVFPQPTANIMPSSSHLFGSVPWGAPVPVSGKPFHHTSYSGAMPMAGGMAGGV HNQFIPLQVTKKRVANKKNFENKDAQSSQATPLQTSQPGSSDVPKVIPQESSSAPFKSSQ ITQPASSFQVEAASQGHSISHHKSAPSSSSRKKSRKLAVNFGISKPSE NT seq 5187 nt NT seq  +upstreamnt  +downstreamnt atgggagtccccaagttttaccgatggatctcggagcggtacccctgcctcagcgaagtg gtgaaagagcatcagatacctgaatttgacaacttgtatctggatatgaatggaattata catcagtgttcccatcctaatgatgatgatgttcacttcagaatttcagatgataaaatt tttactgatatttttcactacttggaagtgttgtttcgcattattaaacctaggaaagtg ttttttatggctgttgatggtgtggctcctcgagcaaaaatgaaccagcagcgtggaagg cgttttaggtcagcaaaggaggcagaagacaaaataaaaaaggcaatagaaaaaggagag actcttcctacagaggccaggtttgactccaactgtattacaccagggactgaattcatg gccaggttacatgaacacctgaagtattttgtaaatatgaaaatttctacagacaagtca tggcaaggagttaccatctatttctcaggccatgagactcctggagaaggagaacataaa atcatggaatttatcagatccgagaaagcaaagccagatcatgatccaaacaccagacac tgtctttatggtttagatgctgacttgattatgcttggattaacaagccatgaggcacat ttttctcttttaagagaagaggttcggtttggtggcaaaaagacgcaaagggtatgcgca ccggaagaaaccacatttcacctcctacacttgtctttgatgagagagtatattgattat gagttttcagtgttaaaagataagatcccatttaaatatgatattgaaaagataatagat gattggattttgatgggatttcttgttggcaatgattttatcccccatctacctcattta catattaatcatgatgcactgcctcttctttatggaacatatattaccatcctaccagaa cttgggggttatattaatgaaaatgggtatctcaacttacctcgatttgagaaatacctt gtgaaattatcagattttgatcgggagcacttcagtgaagtttttgtggacctaaagtgg tttgaaagcaaagttggtaacaagtacctcaatgaagcagcaggtgttgcagcagaagaa gccaggaactacaaggaaaagaaaaaatcaaagggccaggaaaactctatatgttgggct gctttagataaaaatagagaagaagctgtaacttctaaggatcatttggaggatgagact gaagaagatgacctatttgaaactgagtttagacaatataaaaggacatattacatgacg aagatgggagtggacatagtgtctgatgattttctggctgatcaagctgcatgttatatt caggcaatacagtggattttgcactattactatcatggagttcagtcctggagctggtat tatccttaccattatgcacctttcctgtctgatatacgcaacatcagtacactcaaaatc cattttgaactaggaaaaccttttatgccattcgagcaacttctggctgtacttccagca gctagcaaaaatttacttcctacatgctaccagcatttgatgaccagtgaggactcaccc attatagaatattatccacctgattttaaaactgacctaaatgggaaacaacaggaatgg gaagctgtggtactaataccttttattgatgagaagcgattgttggaagccatggagaca tgtaatcactccctcaaaaaagaagagaggaaaagaaaccaacatagtgagtgcttaatg tgctggtatgatagagacacagagttcacctatccctctccatggccagagaaattccct gccatagaacgatgtcgtacaaggtataaagtaatatcattagatgcttggcatgtagac ataagcaagaacaaaataaccagggttgaccagaaggcattatatttctgtggatttcct actctgaaacacatcaaacacaaattttttttgaagaaaagtggagttcaagtattccag cagagcagtcgtggagaaaacatgatgttggaaatcttagtgaatgcagaatcagatgaa cttagtgtagaaaatgtagcttcattggtgcttggaaagtctgtctttgttaattggcct catcttgaagaagctagagttgttggtatatccgatggagaaaccaagttttacttggaa gaacctccaggcatacagaagctttatctgggaagaactgttccaccatctaaagtggtt catcttggagaaaaagaacaatctaactgggcaaaagaagtacaaggaatttcagaatac tacctgagaagaaaaggaataataataaatgaaacatctgcagttgtatatgttcagtta ctcacaggtcatagatatcaaataaatcaaaatggtgaagttcgtctagagaaacagtgg tcaaaacaagttcttccttttgtttatcaagctgttgtcaaggacatccgagcttttgat tcccgtttctccaatatcaaaactttggatgacttgtttcctcctagaagtatggtcttt atgctgggaaccccctattatggctgtgctggagaagttcaggattcaagggatgtgatt acagaaggtaggattcgtgtggttttcagcattccatgtgaacccaatcttgatgcttta atacagaaccagcataaatattctataaagtacaatccaggatatgtgttggccagtcgc cttggagtgagtggataccttgtttcaaggtttacaggaagtatttttattggaagagga tctaggagaaaccctcacggagaccataaagcaaatgtgggtttgaatctcaagttcaac aagaaaaatgaggaggtaccaggatatactaagaaagttggaaatgagtggatgtattca tctgccaccgaacaacttcttgcagagtacatagagagagctacttaactatttagttat atagccaaaaatagccaagaggatgtattctatgaagatgacatttggcctggagaaaat gagaatggtgccgagaaagttcaagaaattattacttggctaaagggacatcctgtcagt acattgtctcgttcttcatgtgatttacaaattctggatgcagctgttgttgaaaaaatt gaggaagaagtcgaaaagtacaagcaaagaaagaataataagaaggtacgggtgacagtg aagccccatttgctgtacagacctttagaacagcagcatggagtcattcctgatcgggat gcagagttccgtctctttgaccgggttgtgaatgtgagagaggacttttcggtgccagtt ggccttcggggcaccgtcataggaattaaaggagcaaatagagaagctgatgtcctattt gaagttttatttgatgaagaatttcctggaggcttaacaataaggtgctcacctggtagg ggatatcgactgccaacaagtgccttggtgaacctttcttatgggagtcgctcagaaact ggaaatcagaagttgacagccattgtgaaaccacaaccagctgtgaatcactatagcttg aattcatcagtttcatctggtcatttgggaggcctgaaccattcccctcaatctcttttt gtttctacgcaagtacctactaaagatgatgatgaattttgcaacatttggcagtcctta cagggatccagaaaggttcagcactttcagccaactctacaagagaagggtgcagttcta cctcaagaagtaactcaacatcataaatctggcttaaatgacaacagtattaaatgtcag caaagaaaacatgagcctcacagaaaatttaaggaagaatgtaggagccctaaaactgag agttggtcacaaaaaatgtcaaataatcagacatttggacggcctggcaaatgtaataat actaagctactgaagagaaatgaaagtacggaagtctcagaaaaccaaaagtttaggact ggttatccaaaaactgttgataagcctaacactggatttgaggactttctagcatccttg aatatctccagagaaaaggaagcacagtcatctcacgaagagcctcccagggaagaacat tggtcaccacagtcattcgctatgaagggaacacggatgcttaaagaaattctaaaaatt gatggctctggtagtgtggaccataagaacgaaatgaagcagtttggtaatgaagtcatt gtttcctgtaatagaagagatgaatatggaccttcctcacagcctaaacaaaatgagaaa ttaacatcttatgtgaacaagcctcaaagtgctagtgagtaccatcatgttcggtctata gacaatgtatgctggcctgcttcaagccagatccctcctgtgtccacaccagtaactgaa ctctcaaaaatttgttcccttattggaatgccacaaccagatttctcctttcttagaaca ccacagacaatgatagtttgccaggtgaaattacctaatggcttgctggtgcatgggcca cagtgccattctgaagaagaagccaaggacaaagctgcactttttgctttacaacagttg ggctccttaggaatgaatttccctttgcctccaccgatatttgcaaattatcctcctgct gtaccacctggaaccattccaccagtttttccccaacctactgctaatataatgccttca tcatctcatctctttggctcagtgccatggggagcaccagtgccagtttctggaaagccc tttcatcatacttcatattctggggccatgcccatggctgggggaatggcaggtggtgtg cacaatcaattcatacctctacaggttactaaaaaaagggttgcaaacaaaaagaacttt gagaataaggacgcccagagttctcaagccaccccacttcagactagccagccagggtct tccgatgtccccaaagtgattccacaggagagttcatcagctcccttcaagtcctctcag attactcagcctgcatcttcctttcaagttgaagctgcctcgcaaggccatagtatatct caccataagtcagcacccagctcttcttcaagaaaaaaatcaagaaaactagctgtcaat tttggcatttctaaaccatctgaataa

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