Myotis davidii (David's myotis): 102768208
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Entry
102768208 CDS
T02992
Symbol
CPSF1
Name
(RefSeq) cleavage and polyadenylation specific factor 1
KO
K14401
cleavage and polyadenylation specificity factor subunit 1
Organism
myd
Myotis davidii (David's myotis)
Pathway
myd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102768208 (CPSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myd03021
]
102768208 (CPSF1)
03019 Messenger RNA biogenesis [BR:
myd03019
]
102768208 (CPSF1)
Transcription machinery [BR:
myd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102768208 (CPSF1)
Messenger RNA biogenesis [BR:
myd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102768208 (CPSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
UspB
Motif
Other DBs
NCBI-GeneID:
102768208
NCBI-ProteinID:
XP_015426860
LinkDB
All DBs
Position
Un
AA seq
1311 aa
AA seq
DB search
MQQASLIYDVLAQMSAFAPSGAPGAAAPLHCLPSFLQAPTKNDRSTEGKAHREHREKLEL
VASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPEL
RDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPS
YIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIT
QKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTSGTT
AFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAAS
VLTSSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEAPASAVREAADKEEPLSKKKRVDSTV
GWSGGQSGPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAMGEPAFLSEE
FQNSPEPDLEIVMCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVVAPGRKEQEET
PQGEGAEQEPSTPDTEDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAG
NIGDNRYIVQVSPLGIRLLEGVNQLHFIPVDLGSPIVQCAVADPYVVIMSSEGHVTMFLL
KSDSYGGRHHRLALHKPPLHHQSKVIAMCVYRDVSGMFTTESRLGGARDELGGRSGSEAE
GPGSETSPTVDDEEEMLYGDSGSLFSPSKEEARRSSQPPTDRDPTPFRAEPTHWCLLVRE
NGTLEIYQLPDWRLVFLVKNFPVGQRVLVDSSFGQPTTQGEARKEEATRQGELPLVKEVL
LVALGSRQSRPYLLVHVDQELLIYEAFAHDSQLGQGNLKVRFPMGIDGPIDSFAPFHNVN
CPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVESKVYAVATSTNT
ACTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNARIELEEWEHVTC
MKTVSLRSEETVSGLKGYVAAGTCLMQGEEVTCRGRILIMDVIEVVPEPGQPLTKNKFKV
LYEKEQKGPVTALCHCNGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISIKNFI
LAADVMKSISLLRYQEDSKTLSLVSRDAKPLEVYSVDFMVDSTQLGFLVSDRDRNLMVYM
YLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGAAEGPSKKSVVWENKHITWFATLD
GGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLSPILDDLLETDRVTAHF
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggcctccttgatttatgacgttttggctcaaatgagcgcttttgccccaagc
ggggcccctggtgcagcagcgcctcttcactgcctcccctccttcctccaggccccgacc
aagaatgacaggagcacagagggcaaggctcacagggagcaccgcgagaagctggagctg
gtggcttccttctccttcttcggcaacgtcatgtccatggccagcgtgcagctggcaggc
gccaagcgggatgccctgctgctgagcttcaaagatgccaagctgtctgtggtggagtac
gacccgggcacccacgacctgaagacactgtctctgcactactttgaggagccggagctg
cgggacgggttcgtgcagaacgtgcacacgccgcgggtgcgtgtggaccctgacggacgt
tgcgcggccatgctcatctacggcacgcggctggtcgtgctgcccttccgcagggagagc
ctggccgaggagcacgaggggctcatgggcgaggggcagaggtccagcttcctgcccagc
tacatcattgacgtccgggcactggacgagaagctgctcaacatcgtcgacctgcagttc
ctgcacggctactacgagcccaccctgctcatcttgtttgagcccaaccagacgtggccc
gggcgggtggccgtgcggcaggacacgtgctccatcgtggccatttcactgaacatcacc
cagaaggtccaccccgtcatctggtccctcaccagcctgcccttcgactgcacccaggcc
ctggcggtgcccaagcccataggtggggtagtggtctttgcagtcaactcgctgctatac
ctgaaccagagtgtccccccatacggcgtggccctcaacagccttacctcaggcaccact
gccttccctctgcgcacccaggagggcgtgcggatcactcttgactgtgcccaggcggcc
ttcatctcctacgacaagatggtcatctccctcaagggcggagagatctacgtgctaacc
ctcatcaccgatgggatgcgcagtgtccgtgccttccacttcgacaaggccgccgccagc
gtgctcaccagcagcatggtcaccatggagcctgggtacctgttccttggctctcgcctg
ggcaactccctccttctcaagtacacggagaagctgcaggaggccccggccagtgctgtc
cgggaggctgctgacaaggaagagcctttgtcaaagaagaagcgagtcgactccacagtg
ggctggtcaggtggccagtccgggccgcaggacgaggtggatgagatcgaggtgtacggc
agcgaggcccagtcgggcacacaactggccacttactcctttgaggtgtgtgacagcatc
ctcaacattggaccctgtgccaatgcggccatgggcgagcccgccttcctgtctgaagag
tttcagaacagccccgagccggacctggagatcgtgatgtgctctggctacggcaagaac
ggggccctgtctgtgctgcagaagagcatccggccccaggtggtgacgacctttgaactt
cctggctgctatgacatgtggacagtggttgcccctgggcgcaaggagcaggaggagacc
cctcagggcgagggcgcggagcaggagcccagcacccctgacacagaggacgacgggcgc
agacacgggttcctgattctgagccgggaggactccaccatgatcctgcagactgggcag
gagatcatggagctggacaccagtggctttgccacacagggtcccacagtctttgccggc
aacatcggggacaatcgctacatcgtgcaagtgtcaccgctcggcatccgcctgctggaa
ggagtgaaccaactgcacttcatccctgtggacctgggctcccccatcgtgcagtgcgcc
gtggctgacccctacgtggtcatcatgagctccgagggccacgtcaccatgttcctgctc
aagagcgactcctacgggggccgccaccaccgcctggctctgcacaagccgccgttgcac
catcagtccaaggtgatcgccatgtgtgtataccgcgacgtcagtggcatgttcaccacc
gagagccgcctgggcggggcccgcgatgagcttgggggacgcagcggctctgaggcggag
ggcccaggctcagagaccagccccacagtggatgacgaggaggagatgctgtacggggac
tcgggctccctcttcagccccagcaaggaagaggcgcgcaggagcagccagcctcccacc
gaccgggaccccacccccttccgggctgagcccacacactggtgcctgctggtgcgggag
aacggaaccttggagatctaccagctccctgactggcggctggtgttcctggtgaagaac
ttcccggtggggcagcgggtgctggtggacagctcgttcggccagcccaccacgcagggc
gaggcccggaaggaggaggctacgcgccagggggagctgcctctcgtcaaggaggtgctg
ctggtggcgctcgggagtcgccagagccggccctacctgctggtgcatgtggaccaagag
ctactcatctacgaggcctttgcccacgactcccagctcggccagggaaacctcaaagtt
cgcttccccatgggcatcgacggccccatcgactccttcgccccgttccacaacgtcaac
tgcccccgcggcttcctgtacttcaacagacagggcgagctgaggatcagcgtcctgcct
gcctacttgtcttacgatgctccgtggcccgtcaggaagatcccgctgcgctgcacagcc
cactatgtggcctaccacgtggagtccaaggtctacgctgtggccaccagcaccaacact
gcgtgcacccggattccacgcatgacgggcgaggagaaggagtttgagaccatcgagaga
gatgaccgctacatccacccccagcaggaggccttctccatccagctcatctccccagtc
agctgggaagccatccccaatgccaggatcgagctggaggagtgggagcacgtgacctgc
atgaagacggtgtcgctgcgaagcgaggagaccgtgtccggcctcaaaggctatgtggcg
gcagggacctgcctcatgcagggggaggaggtcacctgccgcgggcggatcctgatcatg
gacgtgatcgaggtggtgcccgagcctggccagcccctgaccaagaacaagttcaaggtc
ctgtacgaaaaggagcagaaggggcccgtgaccgccctttgccactgcaacggccacctg
gtgtcggccatcggccagaagatcttcctgtggagcctgcgtgccagcgagctgacgggc
atggccttcatcgacacccagctgtacatccaccagatgatcagcatcaagaacttcatc
ttggccgccgacgtcatgaagagcatctcactgctgcgctaccaggaggacagcaagacg
ctcagcctcgtctcccgggacgccaagcccctggaagtgtacagcgtggacttcatggtg
gacagcacccaactgggcttcctggtgtcggaccgtgaccgcaacctcatggtgtacatg
taccttccggaggccaaggagagctttggtggcatgcgcctgctgcgtcgggcggacttc
cacgtgggtgcccacgtgaacaccttctggaggaccccgtgccgaggtgctgccgagggg
cccagcaagaagtcggtcgtgtgggagaacaagcacataacgtggttcgccaccctcgac
ggcggcatcgggctcctgctgcccatgcaggagaagacctaccggcggctactgatgctg
cagaatgcgctgaccaccatgctgccccaccacgctggcctcagccccatcctggacgac
ctgttagagacggaccgggtgactgcccacttctag
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integrated database retrieval system
