Myotis davidii (David's myotis): 102769280
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Entry
102769280 CDS
T02992
Symbol
SCAF8
Name
(RefSeq) SR-related CTD associated factor 8
KO
K13191
RNA-binding protein 16
Organism
myd
Myotis davidii (David's myotis)
Brite
KEGG Orthology (KO) [BR:
myd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myd03021
]
102769280 (SCAF8)
03041 Spliceosome [BR:
myd03041
]
102769280 (SCAF8)
Transcription machinery [BR:
myd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102769280 (SCAF8)
Spliceosome [BR:
myd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102769280 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102769280
NCBI-ProteinID:
XP_006757742
LinkDB
All DBs
Position
Un
AA seq
1269 aa
AA seq
DB search
MDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLY
VIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFK
SEIIQPLLDMAAGXXXXXPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGLPDPWVS
QIANTDTLTAVAQILQSPQGQQFQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQL
TAAAAAANTLNPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEIPASQLSHVSESVNNSIF
HQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEA
NLDDSIDIQQQDMDIDEGQDGAEEEIFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRS
GSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIG
SKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWE
TVKSSEPVKETVQTTQSPPPVEKETVVTTQAEVFPPPVAVLQIPVAPAVPTVSLVPPAFP
VSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPPL
SMTPETVKEVGFGSLVLPGGSVASSLAPSTLPAGTVFNPPPKQAEPEEKVPHLIDHQISS
GENTRSVIPNDIPSGSAILGGQPPNVTNSSGILGVQRPNAPSNSEMLGVRPSNVSSGSGI
IGAQPPNILNNSGILGIQPSGVSSNSGLMGVLPPSLPNNSGLIGVQPPNVLNTAGPLGTQ
PPGGPQNLPPLHLSNQRMPVMPMLDLRPGLMPQAPGPRFPLLQPGIPPQRGLPPPSMLDS
ALHPPPRGPFPPGDIFSQPERPFLIPGRQSIDNIPNPEKRIPLGNDNIQQEGERDYRFPP
IETRESMSRPPPVDVRDVIGRPVDPRDGPGRPPLDGRDHFVRPPVDIRENLVRPGMDHLG
RRDHFGFTPEKPWGHRDFDEREHRALPVFAGPKGLHEERGRFRSGSYRFDPRSGPWNRGF
QEVHRDFDDRRRHWERQRDRDDRDFDFCREMNGNRLGRDRIQNTWVPPPHARVFDFFEGA
TSQRKGDNVPQVNGENAERHAQPPPLPVQNEPELYEKLTSSNEINKEKSDTVADVESEPV
VENTETEGT
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggacacaagaagcatactgtattccctgaatgactacaagccaccaatttcgaaagcg
aaaatgacccaaatcactaaagcagccatcaaagctattaagttctataaacatgtggta
cagagtgttgagaaattcattcagaaatgtaaaccagaatacaaggtacctggactttat
gttattgactccattgtacgacaatctcgacatcagtttggtcaagaaaaggatgtgttt
gcacccagatttagtaataacatcattagcactttccagaacttatatcgttgccctggg
gatgacaagagtaaaatagtgagagtattgaatttatggcagaagaacaatgtatttaag
agtgagattattcagcctcttttggatatggcagcaggannnnnnnnnnnnnttcctcct
ccagtcgtcacacctgtcctggccagtactactgctgctatgagcaataccccaggaact
cctgtgacacctgttactccagccaatgtggtccaaggtttacctgatccatgggtatcc
cagatagcaaatacagatacacttacagctgtagctcagatcttacaaagtcctcaaggc
cagcagtttcagcagttaatacaaactttacagatacaacagcagaagccccagccttcc
attctgcaggccctggatgctggtcttgttgttcagttgcaggctctgaccgcacagctt
acagctgcagctgcagcagccaatacgctcaatcccttagaacagggagtgtcttttaac
aagaagttgatggataggtttgattttggagaagattctgagcatagtgaagaacccaaa
aaagaaattccagcttctcaactttcgcacgtttcagaatcagtgaacaattccattttt
catcagatagcagagcaactacagcaacaaaacctagaacatctcaggcagcaactcctg
gaacagcaacagcctcaaaaggcaacccctcaggatagtcaagaaggaacatttggatca
gagcattccgcgtcaccttcacaagggagcagtcaacagcatttccttgaacctgaagca
aatttggatgattctatagatattcagcaacaggacatggatatagatgaagggcaagat
ggagcggaagaggagatctttgaacaagaagcaaagaaagtggctgttcgctcgagatca
agaacacattcacgctctcgttcaaggtcaccaagaaaacgaaggtctaggtcacggtct
ggatctcgaaagcgtaagcacagaaagcgatcacgctcgcgctcaagagaaagaaagagg
aaatcatcacgctcatactccagtgaaagaagagctagagaaagggagaaggaacgacag
aagaagggattacctccaattcggtctaaaacattaagtgtgtgcagcactaccctctgg
gttggtcaggtggataagaaggcaacacagcaggatttaaccaacctgtttgaagagttt
ggacaaattgaatccattaatatgattcctcccaggggctgtgcgtatgtctgcatggtt
catcgacaagatgcatttcgggctcttcagaaacttagttctggatcatataaaattggg
tccaaggtcattaagattgcttgggctttaaacaaaggtgtaaaaacagaatacaagcaa
ttctgggatgtggaccttggagttacatacataccatgggaaaaagttaaagtggacgac
ttggaaggttttgcagaaggaggcatgattgaccaggaaactgtaaatactgaatgggaa
actgtgaaaagctcagaacctgttaaagagacggtccagacaactcagagcccacctcct
gttgaaaaggaaacagtggtcacaacccaggcagaggtttttcctccacctgttgctgtg
ttacagattccagtagcaccagctgtgcctacagttagtttagtcccaccagcatttcct
gtgtcaatgccagttcctcctcctggattcagtccaatacctccacctccttttctacga
gcaagttttaacccttcacaaccacctcctggttttatgccacctccagttccaccacct
gttgtaccaccgcctactattccaccagtagtaccaacatcattggtgcagccgccatta
tccatgactccagaaactgtgaaagaggttggattcggtagccttgttttaccaggtggt
tctgttgccagcagtcttgctccttccactctgccagctggaactgtttttaatcctccc
cctaaacaagcagagcctgaagaaaaagtacctcatcttatagatcaccagatctcttct
ggtgaaaacaccagatcagtgattccaaatgatattccaagtggctctgcaattttagga
ggacagccgccaaatgtgacaaacagttctggaattcttggagttcagagaccaaatgca
ccaagtaattctgaaatgcttggagtccggccatctaacgtctccagtggttctgggatt
attggagcccagccaccaaatattctaaataactctgggattttgggaatacaaccatcc
ggtgtttcgagtaattctggacttatgggagtactaccccccagtctccctaacaattct
ggacttataggagtacagccacccaatgttctaaatacagctggacctttgggaacacag
ccacctggtgggcctcaaaatttaccccctttacatctctctaatcaaaggatgcctgta
atgccaatgttagaccttcgtccaggactaatgccgcaggcacctggaccaagatttcct
ttgctacagcctggaattccaccccaacgaggacttcctcccccatcgatgcttgattca
gctcttcatccacctccccgtggtccttttcctccaggagatatttttagtcagccagaa
agaccttttctaattcctggaaggcaaagtatagacaatattcctaatccagaaaaaagg
ataccgcttggaaatgataacattcagcaggaaggggagagagattacaggtttcctcct
atagaaaccagggaaagcatgagtagacctcccccagtggatgttagggatgtgattggg
cggcctgtagatcccagagatggtcctggaaggcctccgttagatggcagggatcatttt
gtaagacctcctgtagatattagagagaatcttgtgaggccgggcatggatcatcttggt
cgaagagaccactttggctttactccagagaagccatgggggcatagagattttgatgag
agagagcatcgggctctacctgtctttgctggtccaaaaggcttacatgaagaaagaggg
agatttcggtctggaagctatcgatttgatcccagaagtggtccttggaacagaggattt
caagaagttcacagagattttgatgaccgcagaagacactgggagaggcagagggatagg
gatgacagagattttgatttctgcagagaaatgaatggaaatcgtcttggacgagataga
attcaaaacacctgggtcccccctccccatgctcgggtttttgatttctttgaaggggcc
acttctcaacgaaaaggtgataacgtgcctcaggttaatggtgaaaatgctgagagacat
gctcaaccaccacctttaccagtacagaatgaacctgaactttatgaaaaactgacatct
tcaaacgaaataaacaaggagaagagtgacacagttgctgatgtagaaagtgaaccagtg
gtagaaaacacagaaactgaggggacataa
DBGET
integrated database retrieval system
