Mycobacterium sp. EPa45: AB431_10625
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Entry
AB431_10625 CDS
T03960
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mye
Mycobacterium sp. EPa45
Pathway
mye03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB431_10625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mye03400
]
AB431_10625
Enzymes [BR:
mye01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AB431_10625
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AB431_10625
DNA repair and recombination proteins [BR:
mye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB431_10625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
TackOD1
zf-TFIIB
Auto_anti-p27
zf-TRAF
Cys_rich_KTR
Motif
Other DBs
NCBI-ProteinID:
AKK27055
UniProt:
A0A0G3IHS6
LinkDB
All DBs
Position
2238497..2239345
Genome browser
AA seq
282 aa
AA seq
DB search
MPELPEVEVVRRGLQAHVAGRSISAVRVHHPRAVRRHEAGAADLTARLLDAEITGTDRRG
KYLWLNLSDETALVVHLGMSGQMLLGPVPNTNHLRIAALLDDGTALSFVDQRTFGGWQLA
DLVDVDGSRVPEPVAHIARDPLDPRFDRDAVVTVLRRKHSEIKRQLLDQTVVSGIGNIYA
DEALWRAKINGARLAANLTRRQLGELLDAATEVMREALGQGGTSFDSLYVNVNGQSGYFD
RSLNVYGREDLPCPRCGTAIRREKFMNRSSFYCPKCQPRPRR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactgcccgaggtcgaggtagttcggcgcggcctgcaggcccacgtcgccggt
cggtccatctccgccgtgcgggtacaccacccgcgagcagttcgccggcacgaggccggt
gccgccgacctgaccgcccggctgctcgacgcggagatcaccggaaccgaccggcgtgga
aagtacctgtggctcaacctttctgacgagacggcgctggtggtacacctggggatgagc
ggtcagatgctgctcggcccggtgcccaacaccaatcacctccgcatcgcggccctgctc
gatgacggcaccgcgctgagcttcgtcgaccagcgcaccttcggcggatggcagctggcc
gacctggtcgacgtcgacggcagtcgggtgcccgagccggtcgcccacatcgcacgcgac
ccgctcgatccgcggttcgaccgcgacgccgtcgttacagtgttgcgccgcaagcactcc
gagatcaagcggcagctcctcgatcagaccgtggtgtcggggatcggcaacatctacgcc
gacgaggcgctgtggcgggccaagatcaacggcgcgcgtttggccgccaacctgacccgc
cgccagctcggcgagctgctcgatgcggccaccgaagtgatgcgcgaggcgctcggccag
ggcggcacgtcgttcgactcgctgtacgtcaacgtcaatgggcagtccggttacttcgac
cggtcactgaacgtctacggccgcgaggacctgccttgtccgcgctgtggcacagctatt
cgccgcgagaagttcatgaatcgctcgtcgttctattgcccgaaatgccaaccccggccg
aggcgttga
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integrated database retrieval system
