Mycobacterium sp. EPa45: AB431_11905
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Entry
AB431_11905 CDS
T03960
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mye
Mycobacterium sp. EPa45
Brite
KEGG Orthology (KO) [BR:
mye00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AB431_11905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mye03021
]
AB431_11905
Transcription machinery [BR:
mye03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB431_11905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AKK30450
LinkDB
All DBs
Position
complement(2503873..2505387)
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AA seq
504 aa
AA seq
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MAATKASPATDEPVKRTATKTPAKKPAANGSAPAKRATKAAPRAAGAEAGDPDVTDTPGS
AATPTKARATKAAAKKAPGTRGRAKKDAAPAGTDAEAGTEEELDGELDVDPELDVADDDL
VLDDLEDVADDTDEASDSSDEETEEGAAAKEAPVAEGEAADDEDIAEPSEKDKASGDFVW
DEEESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATQLML
EKTDKGEKLPVQQRRDMQWICRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEG
NLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQR
ELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEA
VVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIR
QIESKTMSKLRHPSRSQVLRDYLD
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgaccaaggcaagcccggcaaccgatgagccggtgaagcgcaccgccaccaag
actcccgcgaagaagccggcagccaatggttccgcgccggccaagcgtgccaccaaggcc
gctccccgcgccgccggagccgaagccggggacccggacgtcaccgacacccccggctcc
gcggccaccccgaccaaggcgcgcgccaccaaggcagcggcgaagaaggcgcccggcacc
cgcggccgggccaagaaggacgccgcccccgccggcaccgacgccgaggccggcaccgag
gaggagctcgacggcgagctcgacgtcgatcctgaactcgacgtagccgacgacgatctg
gtgctcgacgacctcgaagatgttgccgacgacaccgacgaggcgtccgacagcagcgac
gaggagaccgaggaaggcgccgcagccaaggaagcccccgtcgccgagggcgaggccgcc
gacgacgaggacattgccgaaccgtccgagaaggacaaggcctccggcgacttcgtctgg
gacgaggaggagtccgaggcgctgcggcaggcccgcaaggacgccgagctgacggcatcg
gccgactcggtccgtgcgtacctcaagcagatcggcaaggtcgcgctgctgaacgccgag
gaggaggtcgaactcgccaagcggatcgaggccggtctctacgccacgcagctgatgctg
gagaagaccgacaagggcgagaagcttccggtgcagcagcgccgcgacatgcagtggatc
tgccgcgacggcgaccgcgcgaaaaaccatctgctggaagccaacctgcgtctggtggtg
tcgctggccaagcgctacaccggccgtggaatggcgtttctggacctcatccaggaaggc
aacctgggtctgatccgcgcggtcgagaagttcgactacaccaagggctacaagttctcg
acctacgccacgtggtggatccgccaggcgatcacccgcgcgatggccgaccaggcccgc
accatccgtatccccgtgcacatggtcgaggtcatcaacaagctcggccgcattcagcgt
gagctgcttcaggacctgggccgcgagcccactcccgaagagctggccaaggagatggac
atcacgccggagaaggtgctggagatccagcagtacgcgcgtgagccgatctcgctggac
cagaccatcggcgacgagggcgacagccagctcggcgacttcatcgaggattccgaggcc
gtcgtggccgtcgacgcggtgagcttcaccctgctgcaggatcagctgcagtcggtgctc
gagacgctctccgagcgcgaagccggcgtggtgcggctgcggttcggcctgaccgacggt
cagccgcgcaccctcgacgagatcggccaggtctacggggtcacccgtgagcggatccgg
cagatcgagtccaagaccatgagcaagctgcgccaccccagccgctcgcaggtgctgcgc
gactacctcgactga
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