Mycobacterium sp. EPa45: AB431_13775
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Entry
AB431_13775 CDS
T03960
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mye
Mycobacterium sp. EPa45
Pathway
mye03030
DNA replication
mye03430
Mismatch repair
mye03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB431_13775
03430 Mismatch repair
AB431_13775
03440 Homologous recombination
AB431_13775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mye03032
]
AB431_13775
03400 DNA repair and recombination proteins [BR:
mye03400
]
AB431_13775
Enzymes [BR:
mye01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB431_13775
DNA replication proteins [BR:
mye03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB431_13775
DNA repair and recombination proteins [BR:
mye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB431_13775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AKK27567
LinkDB
All DBs
Position
2902175..2905726
Genome browser
AA seq
1183 aa
AA seq
DB search
MGTGTSAGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNA
ATKVGIKPIIGVEAYIAPGSRFDTRRILWGDPGQKSDDVSGSGSYTHMTMVAENATGLRN
LFKLSTLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHEREALESAA
KWREIFGPDNYFLELMDHGLSIERRVREGLLEVGRKLGIPALATNDCHYVTRDASHNHEA
LLCIQTGKTLSDPNRFKFDGDGYFLKSAAEMRALWDAEVPEACDSTLLIGERVQSYADVW
TPTDRMPIFPVPDGHDQGSWLRHEVEAGLRRRFPDGVPPEYTERAGFEIDVICGKGFPSY
FLIVADLINYARSIDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAP
DIDIDFDDRRRGEMVRYAAEKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPGFAIADR
ITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNA
GVHACAVIMSSQPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDC
IENIKANRGIDLDLDTLPLDDPKAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIV
AVLALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLKEILAETYGLIVYQEQIMFI
AQKVASYSMGKADALRKAMGKKKLEVLEAEYQGFKEGMTANGFSEKAVKALWDTILPFAG
YAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLP
PDVNESVQNFASVDDDIRFGLGAIRNVGANVVSSLIATRTEKGKFTDFSDYLNKIDIAAC
NKKVTESLIKAGAFDSLKHPRKGLFLIHTDAVDSVLGTKKAEAIGQFDLFGGSDDADAGD
SAFTIRVPDEEWDDKHKLALEREMLGLYVSGHPLNGVAHLLNAQVDTQIPAILAGDVAND
TQVRVGGILAGVNRRVNKNGMPWASAQLEDLTGGIEVMFFPQTYSLFGAEIADDAVVLVG
GKVRMQDDRISLIANELVVPDFSNAQANRPLAVSLPTRQCTIDKVTALKQVLARHPGTAQ
VHLRLISGERITTLELDQALRVTPSSALMGDLKALLGPGCLGG
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgggtactggaacttctgccggatcttttgtgcacctgcacaaccacaccgagtactcg
atgctcgacggtgccgcgaagatcacgcccatgctcgccgaggcgcagcgcctcgagatg
cccgccatcggcatgaccgaccacggaaacatgttcggggccagcgagttctacaacgcg
gccaccaaggtcggcatcaagccgatcatcggcgtcgaggcctacatcgcgcccgggtcc
cgttttgacacccgccgcatcctgtggggcgatccgggccagaagagcgacgacgtgtcg
ggcagcggctcgtacacccacatgacgatggtggccgagaacgcgaccggcctgcgcaac
ctgttcaagctgtcgacgctggcctcgttcgagggtcagctcggcaagtggtcgcggatg
gacgccgagatcatcgccgagcatgccgaaggcatcatcgccaccacggggtgcccgtcg
ggtgaggtccagacccggttgcggctgggccacgagcgggaggcgctggagtcggccgcc
aagtggcgggagatcttcgggccggacaactacttcctggagctcatggaccacggcctg
tcgatcgagcgccgggtccgcgagggcctgctcgaggtcggccgcaagctcggcattccc
gcgctggccaccaatgactgccactacgtgacccgcgacgcgtcgcacaaccacgaagcg
ctgctgtgcatccagaccggcaagacgctgtcggaccccaaccggttcaagttcgacggt
gacggctacttcctgaagtcggctgccgagatgcgcgccctgtgggacgccgaagttccg
gaggcctgtgattccacgctgctgatcggcgagcgggtgcagtcctacgccgatgtgtgg
acccccaccgaccggatgccgatcttcccggtcccggacgggcacgaccagggcagctgg
ctgcggcacgaggtcgaagccggcctgcggcggcgcttcccggacggggtgccgccggag
tacaccgagcgcgccggcttcgagatcgacgtcatctgcggcaagggtttcccgtcgtac
ttcctgatcgtcgccgacctgatcaactacgcccgctcgatcgacatccgggtgggcccc
ggccgcggatcggccgccggttcgctggtggcctacgcactcggcatcaccaacatcgac
ccgatcccacacggcctgctgttcgagcgcttcctcaacccggaacgcccgtcggccccc
gatatcgatatcgacttcgacgaccgtcgccgcggcgagatggtgcgctacgccgccgag
aagtggggcagtgaccgggtcgcccaggtcatcacgttcggtaccatcaaaaccaaagca
gcgctgaaggattcggcccgcgtccactacggccagcccggcttcgcgatcgccgaccga
atcaccaaagcgctgccgccgccgatcatggccaaagacatcccgttgtcgggcatcacc
gaccccaaccacgagcggtacaaggaggctgccgaggttcgcggcctgatcgacaccgac
cccgacgtgcgcaccatctacgagaccgcgcgcggcctcgagggcctggtccgcaacgcc
ggcgtgcacgcgtgcgcggtgatcatgagctcgcagccgctgatcgacgcgattccgctg
tggaagcggccgcaggacggcgcgatcatcaccgggtgggactacccgtcgtgcgaggcc
atcggcctgctgaagatggacttcctcggcctgcggaacctgacgatcatcggcgactgc
atcgagaacatcaaagccaaccggggcatcgacctggatctcgacaccctgccgctcgac
gaccccaaggcctacgaactgttgagccgcggcgacaccctgggtgtgtttcagctcgac
ggcggcccgatgcgcgatctgctgcggcgcatgcagcccacggagttcaacgacatcgtc
gccgtgctggccctctaccggcccggcccgatgggcatgaacgcccacaacgactacgcc
gaccgcaagaacaaccggcaggccatcaagccgatccaccccgagctcgaggaaccgctc
aaggagatcctcgccgagacctacggtctgatcgtctaccaagagcagatcatgttcatc
gcccagaaggtcgcctcgtactcgatgggcaaggccgacgcactgcgaaaagccatgggc
aagaagaagctcgaggtgctcgaggccgagtatcagggcttcaaggaggggatgaccgcc
aacggtttctccgaaaaagcggtgaaagcgctgtgggacaccatccttccgttcgccggc
tatgccttcaacaaatcgcacgccgccggttacgggctggtctcctactggacggcctac
ctcaaggccaactatccggccgagtacatggccgggctgctcacctccgtcggtgacgat
aaggacaaggccgcggtctatctcgccgactgccgccggctgggcatcaccgtgctgccg
cccgacgtcaacgagtcggtgcagaacttcgcctcggtggacgacgacatccggttcggg
ctcggcgccatccgcaacgtcggcgccaacgtggtcagctcgctgatcgccacccgcacc
gagaaggggaagttcaccgacttctccgattacctgaacaagatcgacatcgcggcctgc
aacaagaaggtcaccgaatccttgatcaaggcaggcgctttcgactcgttgaagcaccct
cgcaagggcctgttcctgatccacacggacgccgtcgactcggtgctgggcaccaagaag
gccgaggcgatcggccagttcgatctgttcggcggctccgacgacgccgatgccggtgac
tcggcgttcaccatccgcgtgcccgatgaggaatgggacgacaagcacaaactcgcactc
gagcgggagatgctggggctgtatgtgtccgggcatccgctcaacggggtggcgcacctg
ctgaacgctcaggtcgacacccagatcccggcgatcctcgccggtgacgtcgccaacgac
acccaggtgcgggtcggcggcatcctcgccggtgtcaaccggcgggtcaacaagaacgga
atgccctgggcctcagcccagttggaggacctcaccggtggcatcgaggtgatgttcttc
ccgcagacctactcgctgttcggcgccgagatcgccgacgacgcggtggtgctcgtcggc
ggcaaggtccgcatgcaggacgaccgcatctcgctgatcgccaacgagcttgtggtgccc
gacttttcgaacgcgcaggcgaaccggccgctggcggtcagcctgcccacccggcagtgc
accatcgacaaggtcaccgcactcaagcaggtgctggcccgccatccgggtaccgcgcag
gtgcatctgcggctgatcagtggcgagcggatcaccacgctggagctcgaccaggcgctg
agagtgacgccgtcctcggcgctgatgggggatttgaaggcgctgctggggccgggctgc
ctaggcggctag
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