Mycobacterium sp. EPa45: AB431_14835
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Entry
AB431_14835 CDS
T03960
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mye
Mycobacterium sp. EPa45
Pathway
mye03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mye00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB431_14835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mye03019
]
AB431_14835
03400 DNA repair and recombination proteins [BR:
mye03400
]
AB431_14835
Enzymes [BR:
mye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB431_14835
Messenger RNA biogenesis [BR:
mye03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB431_14835
DNA repair and recombination proteins [BR:
mye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB431_14835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
AAA_30
DUF3553
DUF7742
Cas3-like_C_2
MarR_2
PcrA_UvrD_tudor
GntR
L_lactis_ph-MCP
TrmB
Motif
Other DBs
NCBI-ProteinID:
AKK27746
UniProt:
A0A0G3IR39
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All DBs
Position
3116798..3118411
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AA seq
537 aa
AA seq
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MGRRTDLQRVAAEVFGWPQLRPAQLEAMEAVLAGRDVLAVMATGSGKSAIYQVPAVLIDG
ATLVVSPLIALQRDQISGLAATDAPDAVAINSQLGRDDIARNWQALRHKEVEYIFLAPEQ
LTNDAVVADLAAMDVSLVVVDEAHCVSAWGHDFRPSYLRIADSIERFGHPPVIALTATAS
PVVRREIVEHLRLRDPLVIASGFDRPNIGLQVSHHVTDHDKREAVLARMHHVERPALLYS
ATRRDSESYAAQLNSSGISAEAYHAGLSREQRDEVHRLFRAEDGVDVVVATSAFGMGIDK
ADVRTVVHASVPDSMDSYYQQIGRAGRDGEPAVAVLFYRPEDLGLARFFTSNRPDEDLLA
RVYAALDRTTPKRLGELRTELGVSGARVTNALNLLEEAELAGSAREGFIRSSDTGVEEAV
RRAVEIVERNERVDRTRVEMMRGYAETRDCRRQFLLSYFGEALPQPCRNCDNCATGLLDD
PPATDRWAVQTPVVHREWGPGTVMGAEDDRITVLFDEFGYRTLLLESIEESGVLTRR
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
gtgggtcgacggaccgatctgcagcgggttgccgccgaggtattcggctggcctcagttg
cggccggctcagctcgaggcgatggaggcggtgctcgccgggcgtgacgtgctggccgtg
atggcgaccggctccggcaagtcggcgatctaccaggtacccgcagtgttgatcgacggc
gcgacgctggtcgtctcgccgctgatcgcgctgcagcgcgaccagatcagcggcctggcg
gccaccgacgcccctgacgcggtcgccatcaactcgcaactgggccgcgatgacatcgcc
cggaactggcaggcgttgcggcacaaggaggtcgagtacatcttcttggcgcccgagcag
ctcaccaacgatgccgtggtcgccgacctggccgcgatggacgtctcactggtggtggtc
gacgaggcccactgtgtgtccgcgtggggccacgacttccgaccgagctatctacggatc
gccgacagcatcgaacgtttcggtcacccgcccgtcatcgcgttgacggcgaccgcgtcg
ccggtggtgcgccgcgaaatcgtcgagcatctgcggctgcgcgatccgctggtcatcgcc
agcggcttcgaccgccccaacatcggactccaggtgtcacaccacgtcaccgaccacgac
aagcgggaggcggtgctggccaggatgcatcacgtcgagcgtccggcactgctctattcg
gcgacgcgtagggactctgaaagctatgccgcgcaactgaattcatccggcatcagcgcc
gaggcctatcatgcgggtctgtcgcgagagcagcgcgacgaggtccatcggctgttccgg
gccgaggatggggtcgacgtggtggtggcgacgtcggcgttcgggatgggcatcgacaag
gccgatgtccgcaccgtggtccacgcgtcggttcccgactcgatggacagctactaccag
caaatcgggcgggccggtcgtgacggcgaaccggcggtggcggtgctgttctaccgtccg
gaggatctcggcctggcccggttcttcacctccaaccggcccgacgaggacctgctggcg
cgggtgtatgcggccctggaccgcacgacccccaagcgattgggtgagctgcgcaccgaa
ctcggggtgtccggtgctcgggtgacgaacgcgctgaacctgctcgaggaggcggagctg
gccggctcggcgcgggaaggcttcatccgcagcagcgatactggcgtcgaggaggcggtg
cgccgcgccgtcgagatcgtcgaacgcaacgaacgagtcgaccgcacccgggtcgagatg
atgcgcggctacgccgagacacgggattgccggcgccagttcctgctgagctatttcgga
gaggcgctgccgcagccgtgccgcaattgcgacaactgtgcgaccggtttgctcgacgac
ccgccggccaccgaccgctgggcggtgcagacgccggtcgtgcaccgggagtggggaccc
ggaacggtgatgggcgccgaggatgaccggatcaccgtgctgttcgacgaattcggctat
cgcaccctgctcttggagtccatcgaggagtccggtgtcctgactcgccgctga
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