Mycobacterium sp. EPa45: AB431_20260
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Entry
AB431_20260 CDS
T03960
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mye
Mycobacterium sp. EPa45
Pathway
mye03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mye00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB431_20260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mye03019
]
AB431_20260
03009 Ribosome biogenesis [BR:
mye03009
]
AB431_20260
Enzymes [BR:
mye01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AB431_20260
Messenger RNA biogenesis [BR:
mye03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AB431_20260
Ribosome biogenesis [BR:
mye03009
]
Prokaryotic type
rRNA processing factors
AB431_20260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
PCB_OB
EAD1
BUD22
Motif
Other DBs
NCBI-ProteinID:
AKK28619
UniProt:
A0A0G3IP47
LinkDB
All DBs
Position
complement(4236688..4239612)
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AA seq
974 aa
AA seq
DB search
MANDDLYQDLPENPTPSQWEPPAPAAGDDLPERLRVHSLARVLGTTSRRVLDALSELDGR
TRSPHSSVDRTDAVRVRDVLAAAPEDTADEPVEAAAVVAEDTAAPEAQTPDVAEAPAVAE
APESAEEPESRLILETTTIVETVEQAAYMPLFVAPQPVEAERKTRKVEDDDEAEDDDEDD
EDESGGETDSDQSERPANRRRRRGRRGRGRGRGEQGGPEGDGGDDAEGDETAESGDESDS
DDDDSDDESSTGEGATRRRRRRRRRKTGGGDDSENGSSDDPPNTVVHERAPRAKAERDPD
AIQGISGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFLARREAVDRVMVVRDKIRTEPPH
EGARYTQIAVMEDGVVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFVDIGRGRNGVL
YAGEVNWEAAGLGGAQRKIEQALKPGDYVVVQVSKDPVGHKGARLTTQVSLAGRYLVYVP
GASSTGISRKLPDTERQRLKEILRDVVPDDAGVIIRTASEGVKEEDIRGDVERLQERWNK
VAEEAERVKGNKAGAAVALYEEPDVLVKVIRDLFNEDFSGLIVSGDSAWETINDYVNSVA
PDLVSKLTKYEPAGGPDGPDVFAVHRIDEQLAKALDRKVWLPSGGTLVIDRTEAMTVVDV
NTGKFTGAGGNLEQTVTKNNLEAAEEIVRQLRLRDIGGIVVIDFIDMVLESNRDLVLRRL
TEALGRDRTRHQVSEVTSLGLVQLTRKRLGTGLVEAFSTTCTHCAGRGIVLHADPVDSNS
AAGRKSEPGSSGGGGGRRGKRGKRGRTEEAPVAKVPQHTSEHPMFKAMAAANGKHEDDEA
EEELADEIERETEAEDFDESETDTDTAEQVGDEVADEDLDDDDDEDSDDDEDSDDDEDEI
DVDLDEDDEDLDEDNLDVDDDDEDDDEDDDLDDEDDTDSDEYDDDQPVVTQAPVASAGRP
RRRSAARPAGPPTS
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
gtggccaacgatgacctctatcaggatctacccgaaaaccccaccccgtcgcagtgggaa
cccccggcgccggccgctggtgacgacctgcccgaacgcctgagggtgcactcgctggca
cgcgtcctcggcaccaccagccggcgcgtgctcgacgccctcagcgagctcgacggccgt
acccgcagcccgcactccagcgtggaccgcaccgacgcggtgcgggtgcgcgacgtcctg
gcggcagcccccgaagacaccgccgacgagcccgtcgaggccgcggccgtcgtggcggag
gacaccgcggcacccgaggcccagacgcccgacgtcgccgaggcgcccgccgtcgccgag
gcgcccgaatcggccgaggagccggagtcgcggctgattctggagaccaccaccatcgtc
gagaccgtagagcaggcggcctacatgccgctgttcgtggctccccagcctgtcgaagcc
gagcgcaagacgcgcaaggtcgaggacgacgacgaggccgaggacgacgacgaggacgac
gaggacgaatccggcggcgaaactgacagtgaccagtccgaacgtcccgccaaccggcgg
cgccgccgcggtcgccgtggccgtgggcgtggccgtggcgagcagggtggccccgagggt
gacggcggagatgacgccgagggcgacgagactgccgagtccggcgacgagtccgacagc
gacgacgacgacagcgacgacgagtcgagcaccggtgagggcgcgacccggcgccgccgc
aggcggcggcgccgcaagaccggtggcggtgacgactccgagaacgggtcgtccgacgac
ccgccgaacaccgtcgtccacgagcgcgccccccgggccaaggctgaacgcgacccggat
gcgatccagggcatcagcggctccacccgcctggaggccaagcgtcagcgccgccgcgac
ggccgcgacgccggccgccgccgcccgccgatcctgtcggaggccgaattcctggcccgc
cgcgaggccgtagaccgcgtgatggtggtgcgcgacaagatccgcaccgaaccgccgcac
gaaggtgcccgctacacccagatcgccgtcatggaagacggggtcgtcgtcgagcacttc
gtgacctcggccgcctcggcgtccctggtcggcaacatctacctcggcatcgtccagaac
gtgctgccctcgatggaggcggcgttcgtcgacatcggccgcggccgcaacggtgtgctc
tacgccggcgaggtgaactgggaggccgccggtctgggcggcgcgcagcgcaagatcgaa
caggccctcaagcccggcgactacgtcgtcgtgcaggtcagcaaggacccggtcggtcac
aagggtgcgcggctgacgacccaggtgtcgctggccgggcgctatctggtctacgtgccg
ggggcatcgtccaccggcatcagccgcaagctgcccgacaccgaacggcagcggctcaag
gaaatcctgcgcgacgtggtgcccgacgacgccggagtgatcatccggaccgcctcggaa
ggcgtgaaggaagaagacattcgcggcgacgtcgaacgcctgcaggaacgctggaacaag
gtcgccgaggaagccgagcgggtcaagggcaacaaagcgggcgccgccgtcgcgctctac
gaagagcccgacgtgctggtcaaggtgatccgcgacctgttcaacgaagatttttccggc
ctgatcgtttccggcgacagcgcctgggagaccatcaatgactacgtcaattccgttgcg
cccgatctcgtttcgaagctgaccaaatacgagccggccggcgggcccgatggcccggat
gtgttcgccgtgcatcgcattgacgagcagctggccaaggccttggaccgcaaggtgtgg
ttgccctcgggcggcacgctggtgatcgatcgcacggaggcgatgacggtcgtcgacgtc
aacaccgggaagttcaccggcgcgggcggcaacctcgagcagacggtcaccaagaacaac
ctcgaagcggccgaggagatcgtgcgccagctgcgcctgcgcgatatcggcggcatcgtg
gtcatcgacttcatcgatatggttctggagtccaaccgcgacctcgtgttgcggcggctg
accgaagcgctgggccgcgaccgcacccgccatcaggtgtcggaggtgacgtcgctcggc
ctcgttcagctgacgcgcaagcggctgggtaccggactggtcgaagcgttctcgaccacc
tgtacgcactgcgccggccggggcatcgtgctgcacgccgatcctgtcgacagcaactcg
gccgccgggcgcaagtccgagcccggcagcagcggcggtggcggtggccggcgcggtaag
cggggcaagcgcgggcgcaccgaagaggcgccggtggcgaaggtcccgcagcacaccagt
gagcacccgatgttcaaggcgatggcggcggccaacggcaagcacgaggatgacgaggcc
gaagaggagctggccgacgagatcgagcgcgagaccgaggccgaagacttcgatgagtcc
gaaaccgatacggacaccgccgagcaggtcggcgacgaggtcgccgacgaggacttggac
gacgatgacgacgaggactccgacgacgacgaggattcggacgacgacgaggacgagatc
gacgtcgacctggacgaagacgacgaggacctcgacgaggacaacctggacgtcgacgac
gacgacgaagacgatgacgaagacgacgacctcgacgacgaggacgacaccgattcggac
gaatacgacgatgaccagccggtcgtgacccaggcaccggtggcgtcggcaggtcggccc
cggcgccggtcggcggcccgaccagcggggccgcccacgtcctag
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