Mycobacterium sp. EPa45: AB431_21125
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Entry
AB431_21125 CDS
T03960
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mye
Mycobacterium sp. EPa45
Pathway
mye03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mye00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AB431_21125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mye03019
]
AB431_21125
03009 Ribosome biogenesis [BR:
mye03009
]
AB431_21125
Messenger RNA biogenesis [BR:
mye03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AB431_21125
Ribosome biogenesis [BR:
mye03009
]
Eukaryotic type
Pre-60S particles
RNases
AB431_21125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AKK28756
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All DBs
Position
4422494..4423129
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AA seq
211 aa
AA seq
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MREELVWIDCEMTGLDLRTDKLIEIAALVTDAELNVLGEGIDVVIHADDEALDGMIEVVA
QMHSRSGLTEEVRASVIDVPAAEEIVMDYIRSHVTQAKTAPLAGNSIATDRGFIARDMPT
LDNYLHYRMIDVSSIKELCRRWYPRIYYGQPEKGLAHRALADIRESIRELKYYRRTAFVP
QPGPSTSEIAAAAGEIDGPDETDSAVVPDNS
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgaagaattggtgtggatcgactgcgagatgaccgggctcgacctgcggaccgac
aagctcatcgagatcgccgccctggtgaccgatgccgagctgaacgtcctcggtgagggc
atcgacgttgtgattcacgccgacgacgaggcgctcgacggcatgatcgaggtggttgcc
cagatgcacagccggtccggactcaccgaggaggtccgcgcgtcggtcatcgacgtgccg
gccgccgaggaaatcgtcatggactacatccgctcccacgtgacgcaggccaagaccgcg
cccctggccggcaattcgatcgccacggaccgcggcttcatcgcccgggacatgccgacg
ctggacaactacctgcactaccgcatgatcgacgtcagctcgatcaaggagctgtgccgg
cgctggtatccgcggatctactacgggcagccggaaaagggcctcgcccaccgcgcactg
gccgacattcgggaatcgatccgcgagctgaagtactaccgtcgcaccgcgttcgtgcct
cagccggggccgtctaccagcgaaatcgctgccgccgcgggcgagatcgacgggccggac
gaaacagattcggctgtagtgcccgacaacagctag
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