Mycoplasma sp. (ex Biomphalaria glabrata): ASO20_01965
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Entry
ASO20_01965 CDS
T04239
Name
(GenBank) hypothetical protein
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
myg
Mycoplasma sp. (ex Biomphalaria glabrata)
Pathway
myg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
myg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ASO20_01965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myg03021
]
ASO20_01965
03400 DNA repair and recombination proteins [BR:
myg03400
]
ASO20_01965
Enzymes [BR:
myg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ASO20_01965
Transcription machinery [BR:
myg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ASO20_01965
DNA repair and recombination proteins [BR:
myg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ASO20_01965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
WAK
Motif
Other DBs
NCBI-ProteinID:
ALV23411
UniProt:
A0A0U3P704
LinkDB
All DBs
Position
434743..435699
Genome browser
AA seq
318 aa
AA seq
DB search
MDKFIRPTFEIIHESDDKRHCIVAVEPLERGLGVTLGNSLRRVLLSSIPGVAAYAVKFHG
ARHEFSTIPNVLESIPNIIINIKNLVVKPENLFQESKEEIVLKIENATGEVKAGNIKCPT
GFSITNPDLHIATVTEGKTFSGNIYVAINRGFVLFTKNKLNMKKSEGMIAIDSNYSPVKN
VKVVVEETRIGKVKDLEKLTLEIETNGAITAKKAVAFASKVVIEHLNEFANWASDIQAQE
LIVDQKETEQRTFLSSSLIDLDLTVRPFNALKQQGIERIEQLCEMSLFDLNNIKNLGKKS
VEEIIEKLDQKGLKLRQE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggataaatttattagacctacatttgaaataattcacgagagtgacgataaaaggcac
tgcatagttgcggttgaaccgttagaacgcggattaggtgttacgttaggtaactctcta
agaagagtattattatcatcgattcctggagtagcagcatatgctgttaaatttcatgga
gcaagacacgaattttcaacaattccaaacgttctagaaagtattccgaatattattatt
aatattaaaaatttagtagtaaaaccggaaaatttatttcaggaatcaaaagaagaaatc
gttttaaaaattgaaaatgcaactggcgaagtaaaagccggcaatattaaatgccctact
ggtttttcaataactaatccagatttacacattgcaactgttacagagggaaaaacattt
tctggaaatatttatgttgcaattaatcgcggttttgttttatttacaaaaaataaatta
aacatgaaaaaatcagaaggaatgatagctattgactcaaactattcacctgttaaaaat
gtaaaagttgtagtagaagaaacaagaatcggaaaagttaaagatttagaaaaattaact
ttagaaatcgaaacaaatggagcaattactgcaaaaaaagcagtagcatttgcaagcaaa
gttgttatcgaacacttaaatgaatttgctaattgagcttcagatattcaagcacaggaa
ttgattgttgatcaaaaagaaacagaacaaagaacattcttaagttcaagtttaattgat
ttagatttaacagttcgcccattcaatgctttaaaacaacaaggtattgaaagaattgaa
caattgtgtgaaatgtcattgtttgatttaaacaacattaaaaaccttggtaaaaaatca
gttgaagaaattattgaaaaattagaccaaaaaggtttaaaactaagacaagaataa
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integrated database retrieval system
