Mycolicibacterium sp. HK-90: QU592_00030
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Entry
QU592_00030 CDS
T11081
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
myh Mycolicibacterium sp. HK-90
Brite
KEGG Orthology (KO) [BR:
myh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
myh03032
]
QU592_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
myh03400
]
QU592_00030 (gyrB)
Enzymes [BR:
myh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
QU592_00030 (gyrB)
DNA replication proteins [BR:
myh03032
]
Prokaryotic type
DNA Topoisomerases
QU592_00030 (gyrB)
DNA repair and recombination proteins [BR:
myh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QU592_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
WKG03583
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Position
5634..7661
Genome browser
AA seq
675 aa
AA seq
DB search
MAAQKKNAPSEYGADSIKVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
FASRVDVRILADGGVQVTDDGRGIPVAMHATGIPTVDVVMTVLHAGGKFEEGAYQVSGGL
HGVGVSVVNALSTRLEADIRKDGYEWFQVYDRSVPGTLKQGEKTTETGTTIRFWADPDIF
ETTVYDFETIARRLQEMAFLNKGLTIELTDERVTAEEVVDDVVSDHAEAPKSAAEEAAEA
AAPVKVKHRVFHYPGGLVDFVKHINRTKSPIQPSVIDFDGKGEGHEVEIAMQWNGGYSES
VHTFANTINTHEGGTHEEGFRAALTSVVNKYAKEKKLLKDKDPNLTGEDIREGLAAVISV
KVSQPQFEGQTKTKLGNTEVKSFVQKICNEQISHWFEANPAEAKTVVNKAVSSAQAREAA
RKARALVRRKSATEIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP
LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDITKLRYHKIVLMADADVDGQHI
STLLLTLLFRFMKPLIEHGHVFLAQPPLYKLKWQRQEPEFAYSDRERDGLLEAGKAAGKR
INVDDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVEARR
SFITRNAKDVRFLDV
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcccagaagaagaacgccccaagtgagtatggcgccgattcgatcaaggtgctc
gaaggcttggaggccgtccgcaaacgcccgggcatgtacatcggttccaccggtgagcgc
ggcctgcaccacctgatctgggaggttgtggacaacgcggtcgacgaggcgatggccggc
ttcgccagccgggtcgacgtcagaattctcgccgacggtggcgtccaggtcaccgacgac
ggccgcggtatccccgtcgcgatgcacgccaccggtatccccaccgtcgatgtggtcatg
accgtcctgcacgccggcggcaagttcgaggagggcgcctaccaggtgtccggcggtctg
cacggagtgggcgtgtccgtggtgaacgccctgtccacccggctcgaggccgatatccgt
aaagatggctacgagtggttccaggtgtatgaccggtcggtccccggaaccctcaagcag
ggtgagaagaccacggagaccggcaccacgatccgcttctgggccgatccggacatcttc
gagaccaccgtctacgacttcgagacgatcgcccgccggctgcaggagatggcgttcctg
aacaaggggctgaccatcgagctcaccgacgagcgggtcaccgccgaggaagtggtcgac
gatgtggtcagcgatcacgccgaggcgccgaagtccgcggccgaggaggcggcggaggcc
gcggcgccggtcaaggtgaagcaccgggtgttccactaccccggcggtctggtcgacttc
gtcaagcacatcaaccgcaccaagtccccgatccagccgagcgtcatcgatttcgacggc
aagggcgaaggccatgaggtcgagatcgccatgcagtggaacggcggctactccgagtcg
gtgcacaccttcgccaacaccatcaacacccacgagggcggcacccatgaagagggcttc
cgcgcggcgttgaccagcgtggtgaacaagtacgccaaggagaagaagctcctcaaggac
aaggatccgaacctcaccggtgaagacatccgcgaaggcctggccgcggtgatctcggtg
aaggtgtcccagccgcagttcgaaggtcagaccaagaccaagctgggcaacaccgaggtc
aagtcgttcgtccagaagatctgcaacgagcagatcagccattggttcgaggccaatccg
gctgaggcgaaaaccgttgtcaacaaggcggtttcgtcagcccaggcccgtgaggccgcc
cgtaaggcccgcgccctggtccggcgcaagagtgccaccgagatcggcggcctgcccggt
aagctcgccgactgccgctcgacggatccccgcaagtccgaactgtatgtggtggagggt
gattcggcaggcggctcggccaagagcggccgcgactcgatgttccaggcgatcctcccg
ctgcgcggcaagatcatcaacgtcgaaaaggcgcgtatcgaccgcgttctgaagaacacc
gaagtccaggccatcatcaccgcgctgggcaccggtatccacgacgagttcgacatcacc
aagctgcggtaccacaagatcgtgctgatggccgacgccgacgtcgacggccagcacatc
tcgacgctgctgttgaccctgttgttccgcttcatgaagccgctgatcgagcacggtcac
gtcttcctggcccagccaccgttgtacaagctcaagtggcagcgccaggaaccggaattc
gcctactccgaccgcgagcgggacggtctgctcgaggcgggcaaggcggccggcaagcgg
atcaacgtcgacgacggaatccagcgttacaagggtctcggcgagatggatgccaaggaa
ctgtgggagaccacgatggatccgtcggtgcgggtgttgcgtcaagtgacgcttgacgac
gcggccgccgccgacgagctgttctcgatcctgatgggcgaggatgtcgaagcacgccgc
agtttcatcacccgcaacgccaaagacgtccggttcctggacgtttag
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