Mycolicibacterium sp. HK-90: QU592_05640
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Entry
QU592_05640 CDS
T11081
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
myh Mycolicibacterium sp. HK-90
Brite
KEGG Orthology (KO) [BR:
myh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
myh03016
]
QU592_05640
Enzymes [BR:
myh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
QU592_05640
Transfer RNA biogenesis [BR:
myh03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
QU592_05640
Prokaryotic type
tRNA splicing ligases
QU592_05640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WKG04589
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All DBs
Position
1169263..1170468
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AA seq
401 aa
AA seq
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MTEHRVENKLVNFASHIDGNTIEQAKQTASMPFVHPHVALMPDAHSGKGSAVGTVIPTID
AVIPAAVGVDIGCGMIAARTEFTATDLDGRDLATLRAAIESAIPLSPGNYNDTLARFPFT
AGRITDLEHLAEQGEVDLSHSPKWRRQLGSLGGGNHFIELCLDQDDRVWLFLHSGSRGVG
NKIAQKHIKIAQKLMKRWWIDLPNPDLAYLPQGTPEFAAYLRELNWAQRFALENRAEMMD
RYMWVFAAWMGYAHLDQPQTAGDFEVERINTHHNYTRKERHGGRDVWLTRKGAIDAHTGV
MGLIPGSMGTRSYVVRGKGNPAGLCSAPHGAGRRFSRNEARRRFTADDLAQRMQGIEYRH
GEEWVDEIPDAYKDIDVVMADAASLVEIEHELRQVLNVKGT
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcaccgcgtcgagaacaagctggtgaatttcgccagccatatcgacggcaac
accatcgagcaggcgaagcagactgcctcgatgccgttcgtgcacccacatgtcgcgctg
atgcccgacgcccacagcggcaaggggtccgccgtcggcaccgtcatccccacgatcgat
gcggtgatcccggccgcggtcggcgtggacatcggctgcggcatgatcgcggcccgcacc
gaattcaccgccaccgacctcgacggtcgtgatctggcgacgttgcgcgcggcgatcgag
tcggcgattccgctgtcgccgggcaactacaacgacacgctggcccggttcccgttcacg
gcgggccgtatcaccgacctcgagcatctggcggagcagggcgaggtcgacctgtcgcac
tcgccgaagtggcgccggcaactcggatccctcggcggtggcaaccacttcatcgagctg
tgcctggatcaggacgaccgggtgtggctgttcctgcactcgggttctcgtggtgtggga
aacaagatcgcccagaagcacatcaagatcgcgcagaaactgatgaagcgatggtggatc
gacctgcccaaccccgacctcgcctacctgccgcagggcacgccggagttcgccgcctat
ctgcgggagctcaactgggcgcagcgattcgccttagagaaccgcgccgagatgatggac
cgctacatgtgggtgttcgccgcgtggatgggttatgcccatctggaccagccgcagacc
gccggcgatttcgaggtcgagcggatcaacacccatcacaactacacccgcaaggaacgt
cacgggggtcgcgacgtgtggctgacccgcaagggggcgatcgacgcgcacacgggtgtc
atgggcctgatccccggcagcatgggaacgcgttcatacgtggtgcgcggaaagggtaat
cccgccggtctgtgctcagctccgcacggtgccgggcgccgattctcccgcaacgaggcc
cgccggcggttcaccgccgacgatctggcgcagcgcatgcagggcatcgagtaccgacac
ggtgaggagtgggtcgatgagatccccgatgcgtacaaggacatcgacgtcgtcatggcc
gacgccgcgagcctcgtcgagatcgagcatgagctccgtcaggtgctcaacgtgaagggc
acctag
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