KEGG   Mycolicibacterium sp. HK-90: QU592_08640
Entry
QU592_08640       CDS       T11081                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
myh  Mycolicibacterium sp. HK-90
Brite
KEGG Orthology (KO) [BR:myh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:myh03400]
    QU592_08640
Enzymes [BR:myh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QU592_08640
    5.6.2.6  RNA 3'-5' helicase
     QU592_08640
DNA repair and recombination proteins [BR:myh03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    QU592_08640
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr DEAD WHD_4th_Lhr WHD_3rd_Lhr Helicase_C ResIII AlkZ-like PhoH TPR_ANAPC2 DUF6406 AAA_22 AAA_25
Other DBs
NCBI-ProteinID: WKG05134
LinkDB
Position
complement(1796111..1800655)
AA seq 1514 aa
MTTTPADPLARFSALTREWFTAAFPAPTAAQAQAWSAIAEGHNTLVIAPTGSGKTLAAFL
WAIDELAQLPPDPRPGTTVLYVSPLKALAVDVERNLRTPLTGITRVAERHGVPAPSISVG
VRSGDTPPSQRRAMLSNPPDILITTPESLFLMLTSAARETLATVRTVIVDEVHAVAATKR
GAHLALSLERLDQLLDRPAQRIGLSATVRPPEEVARFLSGQAPTTIVSPPAAKTFDLSVQ
VPVPDMANLDNNSIWPDVEERIVDLIEAHRSSIVFANSRRLAERLTSRLNEIHAERSGIE
LSLDHNPQVGGGAPAQLMASGQANGAPTLLARAHHGSVSKEQRAQVEDDLKSGRLRAVVA
TSSLELGIDMGAVDLVIQVESPPSVASGLQRIGRAGHQVGEISQGVLFPKHRTDLIGCAV
TVQRMRSGDIETMHVPANPLDVLAQHTVAVAALEPVDADAWFDAVRRSAPFATLPRSAFE
ATLDLLSGKYPSTEFAELRPRLVYDRDHGTLTARPGAQRLAVTSGGAIPDRGLFTVYLAT
DSEKPSRVGELDEEMVYESRPGDVISLGATSWRITEITHDRVLVIPAPGQPARLPFWRGD
SVGRPAELGAAVGAFTGELAALGRAEFDERCQAMGFAGFATDNLYQLLHDQREATGVVPS
DSTFVVERFRDELGDWRVILHSPYGLRVHGPLALAVGRRLRERYGIDEKPTPSDDGIIVR
LPDSGEAPPGADLFVFDADEIEPIVTAEVGGSALFASRFRECAARALLLPRRHPGKRSPL
WHQRQRAAQLLDIARKYPDFPIILETVRECLQDVYDVPALTELMRRVAQRRLRVVEVETA
MPSPFAASLLFGYVGAFMYEGDSPLAERRAAALALDTVLLSELLGRVELRELLDPAVVAS
TSAQLQHLTEERAARDAEAVADLLRMLGPLTEAEIAARATTDAIGGWLDGLQAAKRALPV
TYAGQTWWAAVEDIGLLRDGVGAPVPVGVPAAFTESVDDPLGDLIGRYARTHGPFTTTEV
ATRFGLGLRVTADVLGRMAVDGRLVRGEFTGAAPAATLGRATSEEWCDAEVLRILRRRSL
AALRAQVEPVSTAAYGRFLPSWQHVGSTHSSGIDGLAAVVEQLSGVLIPASALESLVLGQ
RVRDYQPSMLDELLASGEVMWSGAGQIGGSDGWVALHLADSAPLTLPAPAEIEFTDIHRA
VMETLGHGGAYFFRQLADQAPESELKTALWELIWAGWITGDTFAPVRAVLSGPRRTGTPA
HRQRQRPPRLSRYSVARPHTRAADPMVSGRWSALPPAEPDSTVRAHFQAELLLNRHGVLT
KGAAAAEGVPGGFATLYKVLSAFEDAGRCQRGYFVESLGGAQFAAASTVDRLRSYLDGVD
PQRPEYHAVMLAATDPANPYGAALAWPASAESDTTHRPGRKAGALVALVDGQLVWFLERG
GKTLLSFTSDAETQRAAASALADLVRTGRVPSLLVERINGVAVLDPGVDEVRTTVQDALI
GAGFSRTPRGLRLR
NT seq 4545 nt   +upstreamnt  +downstreamnt
atgaccaccacgccggccgatccgctggcccggttcagtgcgctgacccgggagtggttc
acggctgccttcccggcgccgacagccgcgcaggcccaggcctggtccgccatcgccgag
gggcacaacaccctggtcatcgcgcccaccgggtcgggcaagacactggccgcgttcctg
tgggccatcgatgaactcgcccagttgccacccgacccccggccgggcaccacggtgctc
tacgtgtcaccgctcaaagcactggccgtcgacgtcgaacgcaacctgcgtaccccgctg
accgggatcacccgggtggccgagcggcatggggtgcccgccccgtcgatcagcgtcggg
gtgcgctccggcgacaccccgcccagccagcgtcgcgcgatgctgagcaacccgcccgac
atcctgatcaccacaccggagtcgctgttcttgatgctgacctcggcggcccgcgagaca
ctggccacggtccggacggtgatcgtcgacgaggttcacgccgtggccgccaccaaacgt
ggtgcgcacctggcactctcgctcgaacggctcgaccagctcctcgaccggccggcccag
cggatcgggctgtcggccacggtgcgcccgcccgaggaggtggcgcggttcctgtccggg
caggcccccaccaccatcgtgtccccgcctgcggccaagaccttcgacctgtcggtccag
gttccggtgcccgacatggccaacctcgacaacaacagcatctggcccgatgtcgaggaa
cgcatcgtcgacctgatcgaggcgcaccggtcctcgatcgtgttcgccaattcccgtcgg
ctcgccgagcggctgacctcccggctcaacgagatccatgccgagcgttccggcatcgag
ctgtcgctcgaccacaacccgcaggtcgggggtggtgcaccggcccaactcatggccagc
ggtcaggccaatggcgcgccgacactgctggcccgggcccaccacggttcggtcagcaag
gagcaacgcgcccaggtcgaggacgacctcaagagcgggcggttgcgcgccgtcgtcgcc
acctccagcctggagctcggcatcgacatgggggcggtcgacctggtgatccaggtcgag
tcaccgccgtcggtggccagcgggctgcagcgcatcgggcgggccggccatcaggtcggc
gagatctcccagggcgtgctgttccccaagcaccggaccgacctgatcggctgcgcggtg
acggtgcagcgcatgcgctccggtgacatcgagaccatgcacgtgccggccaacccactc
gacgtgctggcccaacacaccgtggcggtcgccgcgctcgaacccgtcgatgccgacgcc
tggttcgacgcggtgcgacgcagcgccccgttcgccaccctgccgcgcagcgcgttcgag
gccaccctggacctgctgtcgggcaagtacccgtccaccgagttcgccgaactccggccg
cggctcgtgtacgaccgcgaccacggaacactgaccgcgcgccccggcgcccagcgcctg
gccgtcacctccggcggggccatcccggaccgcggcctgttcaccgtctacctggccacc
gattccgaaaagccatcgcgggtaggcgaactcgacgaggagatggtctacgaatcccgt
cccggcgatgtcatctcgctgggcgccaccagctggcggatcaccgagatcacccacgac
cgggtgctcgtcatcccggccccggggcaacccgcccggctgccgttctggcgtggtgac
agtgtgggcaggcccgcggagttgggggcggcggtcggggcgttcaccggggaactggcc
gcactcggtcgcgcggagttcgatgagcgttgccaggcaatgggtttcgccggattcgcc
accgacaacctgtaccagctgctgcacgatcagcgggaggccaccggcgtggtccccagc
gacagcaccttcgtggtggagcgcttccgcgacgagctgggcgactggcgggtgatcctg
cactcgccgtacgggctgcgggtgcacggaccactggcgctggccgtgggccgccggttg
cgggaacgctacggcatcgacgagaagcccacgccctccgacgacggcatcatcgtccgg
ttgcccgacagtggtgaagccccgccgggcgcagacctgttcgtgttcgacgccgacgag
atcgaaccgatcgtgaccgcggaggtgggcgggtcggcgttgttcgcgtcccgattccgt
gaatgcgccgcgcgtgccctgctgctgccacgccggcatccgggcaaacggtccccgttg
tggcatcaacggcaacgcgccgcgcaactgctcgacatcgcccgcaagtacccggacttc
ccgatcattctggagacggtgcgcgaatgcctgcaggacgtctacgacgtcccggccctg
accgagctgatgcggcgggtggcccaacgccggctgcgggtggtcgaggtggaaaccgcc
atgccatcaccgttcgcggcctcgctgttgttcggctatgtgggcgcgttcatgtacgag
ggtgacagcccgctggccgagcggcgggccgcggcgctggccctcgacaccgtgctgctg
tccgaactgctgggccgggtcgagcttcgcgaactgctggatccggctgtcgtggcctcc
acgtcggcccagttgcaacacctcaccgaggagcgcgccgcccgcgatgccgaggcggtc
gccgatctgctccggatgctcggcccactcaccgaggcggagatcgccgcgcgcgccacc
accgacgccatcggaggctggctcgacggcttgcaggccgccaagcgtgccctgccggtg
acctatgccgggcagacgtggtgggccgcggtggaagacatcggcttgctgcgcgacggg
gtgggcgcaccggtcccggtgggcgtgcccgcggcgttcaccgaatccgtcgatgatccg
ctcggggatctgatcggccggtacgcccgcacccacgggccgttcacgaccaccgaggtc
gccacccgcttcggcctcggcctgcgggtgaccgcagatgtgctgggccgcatggccgtc
gacggccggctggtgcgaggcgagttcaccggagccgccccggcggcgacattgggtcgg
gcgacttccgaggaatggtgcgacgccgaggtgctgcggattctgcgtcgtcgttccctg
gccgcgctgcgcgctcaggttgagccggtcagcaccgcggcctatggtcgtttcctgccg
tcctggcaacacgtcggttccacgcacagctccggcatcgacggactggccgcggtggtc
gagcagctgtccggggtcctgatcccggcctccgcgttggagtcgctggtgctcggacag
cgggtgcgtgactatcagccgtccatgctcgacgagctgctggcgtctggggaggtcatg
tggtcgggagctgggcagatcggtggcagcgacggctgggtggcgctgcatctggccgat
tccgcaccgctgacgctgcccgcaccggccgagatcgagttcaccgatatccaccgggca
gtcatggagacgctggggcacgggggcgcgtacttcttccgccaactcgccgatcaggcc
ccggaatccgagctgaaaaccgcactgtgggaactgatctgggccggatggatcaccggt
gacacgttcgccccggtgcgcgcagtgttgtccggtccgcggcggaccggcacgccggcg
caccggcagcgccaacgtccgccccggctcagccgctacagcgtcgcacgcccgcacact
cgcgcggccgatccgatggtgtccggccggtggtcggccttgccgcccgcagagccggat
tcgacggtgcgggcccatttccaggctgagctgctgctgaatcgacacggagtgctcacc
aagggcgcggcggccgccgagggggtgccgggtgggttcgccacgctgtacaaggtgctg
agcgccttcgaggatgccggccgttgccagcgcggctacttcgtcgagtcactgggcggg
gcccagttcgcggcggcctcgactgtcgaccggttgcggtcctacctcgacggggtcgat
ccgcagcgccccgaataccacgccgtcatgctcgccgcgaccgacccggccaacccgtac
ggggccgcactggcctggcccgcctcagccgagtccgacaccacgcaccggcccggccgc
aaggcgggtgccctggtcgcgttggtcgacggacagttggtgtggttcctggaacgcggt
ggcaagaccctgctcagcttcacctcggacgccgagacccaacgcgcggccgcctccgcg
ctggcggacctggtgcgcaccgggcgtgtgccgtcgctcctggtggaacggatcaacggc
gtggcggtgctcgatcccggggtcgacgaggtccgaaccaccgtgcaggacgcactgatc
ggggccgggttctcccgcaccccgcgtggcctgcgactgaggtag

DBGET integrated database retrieval system