Mycolicibacterium sp. HK-90: QU592_08820
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Entry
QU592_08820 CDS
T11081
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
myh Mycolicibacterium sp. HK-90
Brite
KEGG Orthology (KO) [BR:
myh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myh03021
]
QU592_08820
Transcription machinery [BR:
myh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QU592_08820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_24
HTH_3
MarR
Sigma70_ECF
KORA
DUF7343
HTH_ParB
LacI
MarR_2
HTH_IclR
HTH_31
Motif
Other DBs
NCBI-ProteinID:
WKG06475
LinkDB
All DBs
Position
1824486..1825208
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AA seq
240 aa
AA seq
DB search
MFRELSGLSEGSSAYERQRERIVERCLPLADHIARRFDGRGEPREDLVQVARVGLVNAVN
RFDVEAGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRLKELHLRLGAATAELSQRLGRA
PTASELAGELDMDREEVIEGLVAGSSYNTLSIDSGGGGDEDAPAIVDTLGDVDLGLDQID
NRETLRPLLAQLPERERTVLVLRFFESMTQTQIAERVGVSQMHVSRLLAKSLARLRDQLQ
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcgaactcagcggattgtccgaaggctcgtcggcctatgaacgccaacgggag
cggatcgtcgagcgctgcctgcctctcgccgatcacatcgcgcggcgtttcgacggccgc
ggcgagccgcgcgaggacctggtccaggttgcgcgggtaggcctggtcaacgcggtgaac
cggttcgatgtggaggccggctccgacttcgtctcgttcgccgtgccgacgatcatgggc
gaggtccgccggcacttccgggacaacagctggtcggtgaaggtgccgagacggctcaaa
gaactgcacctgcggctgggtgcggcaaccgccgagttgtcccagcggttaggccgcgcg
ccgacggcctcagagctcgccggcgaactcgacatggaccgtgaagaggtgatcgaaggg
ctggtcgccggcagctcgtacaacaccctgtcgatcgacagcggcggcggtggcgacgag
gatgctccggcgatagtcgacacgctcggcgatgtggatctcggcctggatcaaatcgac
aatcgggaaacgttgcggccgttgctcgctcagttacctgagcgggagcgcacggtgctg
gtgttgcgattcttcgaatccatgacgcagacgcagatcgccgagcgtgtcggtgtctcg
cagatgcacgtttcgaggctgttggcgaaatcgctagcgcgacttcgtgaccaactgcag
tag
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