Mycolicibacterium sp. HK-90: QU592_14965
Help
Entry
QU592_14965 CDS
T11081
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
myh Mycolicibacterium sp. HK-90
Pathway
myh03030
DNA replication
myh03430
Mismatch repair
myh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
myh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QU592_14965 (dnaE)
03430 Mismatch repair
QU592_14965 (dnaE)
03440 Homologous recombination
QU592_14965 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
myh03032
]
QU592_14965 (dnaE)
03400 DNA repair and recombination proteins [BR:
myh03400
]
QU592_14965 (dnaE)
Enzymes [BR:
myh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QU592_14965 (dnaE)
DNA replication proteins [BR:
myh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QU592_14965 (dnaE)
DNA repair and recombination proteins [BR:
myh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QU592_14965 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
WKG06291
LinkDB
All DBs
Position
3083605..3087162
Genome browser
AA seq
1185 aa
AA seq
DB search
MSGSSSGSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLGMPAIGMTDHGNMFGASEFY
NSATKAGIKPIIGIEAYIAPASRFETKRVQWGDPSQKGDDVSGSGAYTHMTMVAENATGL
RNLFKLSSLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHRQEALEA
AAKWREIFGPENFFLELMDHGLDIERRVREGLLEIGQKLNIPPLATNDCHYVTRDASQNH
EALLCIQTGKTLSDPNRFKFDGDGYYLKSAEEMRALWDSQVPGACDSTVLIGERVQSYAD
VWTPTDRMPVFPVPDGHDQNSWLTHEVQAGLERRFRGAAVPTEYTDRAAYEIKVICEKGF
PSYFLIVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERP
SAPDIDIDFDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPGFAI
ADRITKALPPPIMAKDIPVSGITDPNHERYKEAAEVRALIDTDPDVRTIFETARGLEGLV
RNAGVHACAVIMSSEPLIDAIPLWKRPQDGAVITGWDYPSCEAIGLLKMDFLGLRNLTII
GDCLENIKANRGIDLDLDTLPFDDPAAYELLGRGDTLGVFQLDGSAMRDLLRRMQPTGFN
DIVAVLALYRPGPMGMNAHNDYADRKNGRQAIKPIHPELEEPLKEILAETYGLIVYQEQI
MFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEGAVKALWDTILP
FAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT
VLPPDVNESVQNFASVGDDIRFGLGAIRNVGANVVASLINTRTEKGKYADFSDYLNKIDI
AACNKKVTESLVKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGDDGG
GTDAVFTIKVPEEEWEDKHKLALEREMLGLYVSGHPLNGIAHLLANQVDTQIPAILDGDV
ANDAQVVVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGHEIADDVVV
LVKAKVAARDDRISLIAHELVVPDFSSAQADRPLAVSLPTRQCTIDKVSALKQVLANHPG
TAQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttcatcatcgggttcctcaggatcttttgttcacctgcacaaccacaccgag
tactcgatgctggacggcgccgcgaagatcaccccgatgctggccgaggcgcagcggctg
ggcatgccggccatcggcatgaccgaccacggcaacatgttcggtgccagcgagttctac
aactcggcgaccaaggccggcatcaaaccgatcatcggtatcgaggcgtacatcgcgccc
gcctcccggttcgagaccaagcgggtccagtggggtgacccgagccagaagggcgatgac
gtctcgggcagcggcgcctacacccacatgacgatggtcgccgagaacgcgaccggtctg
cgcaacctgttcaaactgtcctcgctggcctccttcgagggccagctcggcaagtggtcg
cgcatggacgccgagatcatcgccgaacatgccgagggcatcatcgcgaccaccggctgc
ccgtcgggtgaggtgcagaccaggcttcggctggggcaccggcaggaggctctggaggca
gccgccaaatggcgcgagatcttcggccccgagaatttcttccttgagttgatggaccat
gggctcgacatcgagcgtcgggtgcgcgagggcctgctggagatcgggcagaagctcaac
attccgccgttggccaccaacgattgtcattacgtgacgcgtgatgcctcacagaaccac
gaagccctgctgtgcatccagaccggcaagaccctgtcggacccgaaccgcttcaagttc
gacggcgacggctactacctcaaatcggccgaggagatgcgcgccctgtgggattcgcag
gtgccgggcgcgtgtgattccaccgtcctgatcggcgagcgcgtgcagtcctacgccgac
gtctggacgcccaccgaccgcatgccggtgttcccggtccccgacggccacgaccagaac
tcatggctgacccatgaggtgcaggccgggctcgagcgccggttccgcggcgcggccgtg
cccaccgagtacaccgaccgggcggcctacgagatcaaggtcatctgcgagaagggtttt
ccgtcctacttcctgatcgtggccgatctgatcaactacgcgcgttcggtcgggatccgg
gttgggccgggccgtggatcggcggccgggtcgctggtggcctacgcgctgggcatcacc
aacatcgaccccatcccgcacggtctgctgttcgagcgcttcctcaacccggaacgcccg
tcggcccccgatatcgacatcgacttcgacgaccgtcgccgcggcgagatgctccggtac
gccgccaacaagtggggcagcgaccgggtggcccaggtgatcaccttcggtaccatcaaa
accaaagccgcgctgaaggattcggcccgcgtgcactacggccagccgggtttcgcgatc
gccgaccggatcaccaaggcgctcccgccgcccatcatggccaaggacatcccggtctcg
gggatcactgatcccaaccacgagcggtacaaggaagccgccgaggttcgagccctgatc
gacaccgatccggatgtgcggaccatcttcgagaccgcgcgtgggctggaaggcctggtc
cgcaacgccggtgtccacgcctgtgcggtgatcatgagctccgagccgctcatcgacgcg
atcccgctctggaagcggccgcaggacggggcggtcatcaccggttgggactacccgtcg
tgcgaggccatcggcctgctgaagatggacttcctcggcctgcgaaacctgacgatcatc
ggtgactgcctggagaacatcaaggccaaccgtggtatcgacctcgatctggacacgctg
ccgttcgacgatccggccgcctacgagctcctcggccgcggcgacacattgggcgtgttc
cagctcgacggcagcgcgatgcgtgacctgctgcggcgcatgcagccgaccggattcaac
gacatcgtggcggtgctcgcgctgtaccggccgggcccgatgggcatgaacgcccacaac
gattacgccgaccgcaagaacggccgccaggcgatcaagccgattcaccccgagctcgag
gaaccgctcaaggagatcctggccgagacctacggcctgatcgtctaccaagagcagatc
atgttcatcgcccagaaggtggcctcctacaccatgggtaaggccgacgcgctgcgaaag
gccatgggcaagaagaagcttgaggtgctggaagccgagtacaaaggcttctacgagggc
atgaccgccaacggcttctcggaaggcgcggtcaaggcgttgtgggacacgattctcccg
ttcgccggttacgcgttcaacaagtcgcacgcggccggctacggcctggtctcgtactgg
acggcctacctgaaggcgaactacccggccgagtacatggccggcctgctcacctcggtc
ggtgacgacaaggacaaggccgcggtctaccttgccgactgccgccggctcggcatcacc
gtgctgccgcccgatgtcaacgagtcggtgcagaacttcgcctcggtcggtgacgacatc
cggttcggtctgggcgcgatccgcaacgtcggcgcgaatgtcgttgcctccctgatcaac
acccgcacggagaaaggcaagtacgccgacttctccgactacctcaacaagatcgacatc
gcggcctgcaacaagaaggtcaccgaatcgctggtgaaggcgggcgcgttcgactctctc
ggccacccccgcaaggggctgttcctggtgcacaccgacgccgtcgactcggtgctcggc
accaagaaggccgaggcgatgggccagttcgacctgttcggcggcggggacgacggtggt
ggcacggacgcggtgttcaccatcaaggtgcccgaggaggagtgggaggacaagcacaaa
ctcgcactcgagcgcgagatgctgggcctgtacgtgtccggccacccgctcaacgggatt
gcccacctgctggccaaccaggtcgacactcagatccccgcgatcctcgacggcgatgtc
gccaacgacgcgcaggtggtggtcggcggcatcctcgcctccgtcaaccggcgggtcaac
aagaacggactgccctgggcgtcagcgcaattggaggatctcaccggcggtatcgaggtg
ctgttcttcccgcagacctactcactgttcggccatgagatcgccgacgacgtggtggtg
ctggtcaaggcgaaggtggcggcccgcgatgaccggatctcgctgatcgcccatgaactg
gtggtgcccgacttcagcagcgcccaggccgaccgtccgctggcggtcagcctgcccacc
cggcagtgcacgatcgacaaggtcagcgcactcaagcaggtgctggccaatcatcccggc
accgcccaggttcacctgcggttgatcagtggcgagcgcatcaccacgctggagctggat
cagtcgctgcgggtgacaccgtcctcggcgctgatgggtgacctcaaggcgttgctcggt
cccggctgcctgggctag
DBGET
integrated database retrieval system
