Mycolicibacterium sp. HK-90: QU592_22705
Help
Entry
QU592_22705 CDS
T11081
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
myh Mycolicibacterium sp. HK-90
Pathway
myh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QU592_22705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myh03019
]
QU592_22705
03009 Ribosome biogenesis [BR:
myh03009
]
QU592_22705
Enzymes [BR:
myh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QU592_22705
Messenger RNA biogenesis [BR:
myh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QU592_22705
Ribosome biogenesis [BR:
myh03009
]
Prokaryotic type
rRNA helicases
QU592_22705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
P-loop_SecA
HEM4
adh_short
Flavi_DEAD
Surface-like_ins_dom
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WKG02018
LinkDB
All DBs
Position
complement(4736519..4738297)
Genome browser
AA seq
592 aa
AA seq
DB search
MTSPDPDPGDAAPTFADLQIHPAVLQAVTEVGYESPSAIQAATIPAMLAGSDVVGLAQTG
TGKTAAFAIPILSKIDTTSRNTQALVLAPTRELALQVAEAFGRYGAHLPAINVLPIYGGA
SYTVQLSGLRRGAQVVVGTPGRVIDHLERGTLDLSNLDYLVLDEADEMLTMGFAEEVERI
LADTPEYKQVALFSATMPPAIRKITTKYLHDPVEVTVKAKTATAENITQRFIQVAGARKL
DALTRVLEVEEGDAMIVFVRTKQATEEVAERLKARGFAAAAINGDINQAQRERTITALKD
GTIDILIATDVAARGLDVERISHVVNYDIPHDTESYVHRIGRTGRAGRSGHALLFVTPRE
RHLLKSIEKHTRSKVIEAELPSVDDVNAQRVAKFRDSITDALNGPGLELFRRIIEDYERE
NDVPMADIAAALALQSRNGEEFLMTEPPPEKRRERDRDDRGERPPRKERPPREGLATYRI
SVGKRHKVGPGHIVGAIANEGGLHRNEFGHITIRGDYSLVELPEKLSSKTLKALENTRIS
GMLINLAPERDERADRGPRREYKGRSEYKGRSDYKGRSENKDRSGKPHRKTK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgccagacccggatccgggggacgccgccccgacatttgccgacctgcagatt
caccctgcggtgctacaagctgtcaccgaagtcgggtacgagtcgccctcggcgatccaa
gccgcgaccatcccggccatgctggccggctccgatgtcgtcggactggcccagaccggt
accggcaagaccgcggccttcgccatcccgatcctgtcgaagatcgacaccaccagccgc
aacacccaggcgctggtgctggcgccgacgcgggagctggcattgcaggtcgccgaggca
ttcggccgctacggcgcgcatctgcccgcgatcaacgtcctgccgatctacggcggcgcg
tcctacaccgtgcagctgtccgggttgaggcgcggcgcgcaggtggtggtgggcaccccg
ggccgtgtgatcgaccacctcgagcgcggcacactggacctctcgaacctggactacctg
gtgctcgacgaggccgacgagatgctcaccatgggcttcgccgaagaggtcgagcggatc
ctcgccgacaccccggagtacaagcaggtggccctgttctcggccaccatgccgccggcc
atccgcaagatcaccaccaagtacctgcacgatccggtggaggtcacggtcaaggccaag
accgccaccgccgagaacatcacccaacgcttcatccaggtggccggagcgcgcaagctg
gacgcgctgacgcgggtgctcgaggtcgaagagggcgacgcgatgatcgtgttcgtccgc
accaagcaggccaccgaggaggtcgccgagcggctcaaggcccgcggtttcgcggccgcg
gccatcaacggcgacatcaaccaggcacagcgtgagcgcacgatcaccgcgctcaaggac
ggcacgatcgacatcctgatcgccaccgacgtcgccgcgcgcggtctggacgtcgagcgc
atctcgcacgtcgtcaactacgacatcccgcacgacaccgagtcgtacgtgcaccgtatc
gggcgcaccggccgggccggccggtccgggcacgcgctgctgttcgtcaccccgcgtgaa
cgtcatctgctcaagtcgatcgagaagcacacgcggtcgaaggtcatcgaggccgagctg
cccagtgtcgacgacgtcaacgcgcagcgggtcgccaagttccgcgactcgatcaccgac
gcgctcaatggtccgggcctcgagttgttccgccggatcatcgaggactacgagcgtgag
aacgacgtgccgatggccgacatcgccgcggcactggcgttgcagtcgcgcaacggcgaa
gagttcctgatgaccgagccgccgccggagaagcgccgggagcgggatcgcgacgatcgt
ggcgagcggcccccgcgcaaggagcgtccgccgcgcgagggcctggcgacgtaccggatc
tcggtcggcaagcggcacaaggtggggcccggccacatcgtcggcgccatcgccaacgag
ggcgggctgcaccgcaacgagttcggccacatcaccattcgcggggactactcgttggtg
gagctgccggagaagctgtccagcaagacgctcaaggcgctggaaaacacccgcatctcg
ggcatgctgatcaatctggcgccggagcgggacgagcgcgccgaccgtggaccgcgccgg
gagtacaagggccgttccgagtacaagggccgttctgactacaagggccgatccgagaac
aaagaccgttcggggaagccgcaccggaagacgaagtga
DBGET
integrated database retrieval system
