Mycolicibacterium sp. HK-90: QU592_25175 Help Entry QU592_25175       CDS       T11081                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism myh  Mycolicibacterium sp. HK-90 Pathway myh03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:myh00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     QU592_25175  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:myh03400]     QU592_25175 Enzymes [BR:myh01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      QU592_25175 DNA repair and recombination proteins [BR:myh03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      QU592_25175 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S RNA_ligase Thr_synth_N Motif Other DBs NCBI-ProteinID:  WKG02473 LinkDB All DBs Position complement(5238236..5240512) Genome browser AA seq 758 aa AA seqDB search MERYERVRLTNPDKVLYPASGTTKAEVFDYYLSIAEVMVAHIAGRPVTRKRWPNGVEQAS FFEKQLASSAPSWLERGTIVHKSGTTTYPIVNTREGLAWIAQQAALEVHVPQWRFTSDGG QGPATRIVFDLDPGEGVTMPQLCEVAGAVRELMSDIGLTTYPLTSGSKGLHLYVPLADPI SSRGASVLAKRVAVQLEQSMPKLVTATMTRSVRAQKVFLDWSQNNGAKTTIAPYSLRGRE YPTVAAPRTWDEIADPDLRHLRFDEVLQRVSDDGDLLAGLDEDAPRPDKLTTYRSMRDAA KTPEPVPQDVPTTGNNDRFVIQEHHARRLHYDLRLERDGVLVSWAVPKNLPETTAVNHLA VHTEDHPIEYLAFHGDIPKGEYGAGKMVIWDTGTYDAEKFRVTDNAEDKNGEVIFTLRGN RIDGRYALIQTEGKNWLAHRMKDQKSATPEPQDFAPMLATEGSVDKLKATQWAFEGKWDG YRVLVEADHGRLQLRSRRGRDVTGEYPQLRALAADLADHHVVLDGEAVALDESGVPSFGE MQNRARSTRVEYWAFDILWLDGRSLLRAKYSDRRKVLEALAAGGGLIVPAPLPGDGPEAM EHARRQRFEGVIAKKRDSTYQPGRRSASWIKDKIWNTQEAVIGGWRQGEGGRSSGIGALL LGVPGPDGLQFAGRVGTGFTEKELTKLKGMLAPLHTDESPFDKPLPKLDAKGVTFVRPEL VGEVRYSERTSDHRLRQPSWRGLRPDKTPDEVVWESGN NT seq 2277 nt NT seq  +upstreamnt  +downstreamnt atggagcgctatgagcgggttcggctgacgaaccctgacaaggtgctctatcccgcgtcc ggcaccaccaaggccgaggtgttcgactactacctgagcatcgccgaggtcatggtggcg cacatcgccggccgcccggtcacccgcaaacgctggcccaacggggtcgaacaggcgtcg ttcttcgaaaagcagctggcgtcgtcggcgccgagctggctggagcgcggcaccatcgtg cacaagtccgggaccaccacctacccgatcgtcaacacccgggaggggctggcctggatc gcccagcaggccgcactcgaagtccatgtgccgcaatggcgtttcacctccgacggtgga cagggcccggccacccggatcgtgttcgacctcgatccgggcgagggcgtcaccatgccg cagttgtgcgaggtagccggggcggtgcgtgagctgatgagcgacatcgggctgacgacg tatccgctcaccagcggcagcaagggcctgcatctgtacgtgccactggccgacccgatc agttcccggggcgcctcggtactggccaaacgggtggccgtgcagttggaacagtcgatg cccaagttggtcaccgccacgatgacccgcagcgtccgggcccagaaggtgttcctggac tggagtcagaacaacggggccaagaccacgatcgcgccctactcgctacgcggccgggag tatccgaccgtcgcggcgccccgcacgtgggacgagatcgccgatccggacctgcgccac ctgcgtttcgatgaagtactgcaacgggtttccgacgacggcgatctgcttgccgggctc gatgaggacgcgccgcggcccgacaagctcaccacctatcgcagcatgcgtgatgcggcc aagacgccagagcccgtgccccaggacgttccgacgaccggcaacaacgaccggttcgtg attcaggaacatcacgcacggcgattgcactacgacctgcggctggaacgcgatggggtg ctcgtcagctgggcggtgcccaagaacctgcccgagaccaccgcggtgaatcaccttgcg gtgcataccgaagaccacccgatcgagtacctggccttccacggcgacatccccaagggg gagtacggcgccgggaagatggtcatctgggacaccggaacctacgatgccgagaagttc cgggtcaccgacaacgccgaggacaaaaatggcgaagtcatcttcacgctgcgcggtaac cgcatcgacggccgctacgcgctgatccagaccgagggcaagaactggctcgcccaccgg atgaaggaccagaagtcggcaacacccgagccgcaggatttcgcaccgatgttggccacc gagggctcggtcgacaaactcaaggccacgcaatgggcgttcgagggcaagtgggacggc taccgggtgctggtcgaggccgaccacggccgcctgcaactgcgttcgcgccgcgggcgc gatgtcaccggcgaatacccgcaattgcgggccctggcagccgatctcgccgaccaccat gtggtgctcgacggtgaggcggtggccctcgacgaatccggggtgcccagcttcggtgag atgcagaaccgggcaagatccacccgagtcgagtactgggccttcgacatcctgtggctc gacggccggtcgttgttgcgtgccaagtactccgaccggcgaaaggtgttggaggcgttg gccgccggtggcgggctgatcgtgcccgcgccgctgcccggcgacggacccgaggccatg gagcatgcccgccgacaacggttcgagggcgtgatcgccaagaaacgcgattcgacctac cagccgggccgccggtcggcgtcctggatcaaggacaagatctggaacacccaggaggcc gtgatcggcggctggcgtcagggcgagggtggacgcagcagcgggatcggggccctgctg ctcggcgtgcccggccccgacggcctgcagttcgccggccgggtcggtaccggtttcacc gagaaggagttgaccaagctcaagggcatgctggccccgctgcacaccgacgaatcaccc ttcgacaagccgctgccgaagctcgatgccaaaggggtcacctttgtgcgacccgagctg gtgggggaggtgcgctacagcgagcgcacctcggatcatcgtctgcgccaaccgagctgg cgtggcctgcggccggacaagacgccggatgaagtggtgtgggagtcagggaactag

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