Mycolicibacterium sp. HK-90: QU592_25975
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Entry
QU592_25975 CDS
T11081
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
myh Mycolicibacterium sp. HK-90
Pathway
myh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
myh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QU592_25975
09124 Replication and repair
03420 Nucleotide excision repair
QU592_25975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myh03021
]
QU592_25975
03400 DNA repair and recombination proteins [BR:
myh03400
]
QU592_25975
Enzymes [BR:
myh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QU592_25975
Transcription machinery [BR:
myh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
QU592_25975
DNA repair and recombination proteins [BR:
myh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
QU592_25975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
WKG02619
LinkDB
All DBs
Position
5392902..5394551
Genome browser
AA seq
549 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDHEQAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVSFSRYPVPQPLLVDIVDTMARYGRLQLIKHPAHGLTLVSLDRAVLEEVL
RNKKIAPMLGARIDDDTVIVHNSERGRVKQMLLKIGWPAEDLAGYVDGEAHPIELAQDGW
QLRDYQEMATDSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRE
LVARTSLTEDEIGEYSGEKKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECIEVRVTMTDNERMLYATAEPEERYKLCSTVHTKIAVVRSILERHPGEPTLVIGAYLD
QLEELGQELDAPVIQGSTKNAEREALFDAFRRGEISTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKASGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgactgacggccctttgatcgtgcagtccgacaagacggtcctgctcgaggtcgaccac
gaacaagcaggcgccgcgcgggctgcgatcgcaccgttcgccgagctcgaacgcgccccc
gagcacgtacacacctaccggatcaccccgttggcgctgtggaacgcccgcgcggccggc
cacgacgccgagcaggtggtcgacgcgctggtcagcttctcgcgctacccggtgccgcag
ccgctgctggtcgacatcgtcgacaccatggcccggtacggccggctgcagctgatcaag
catccagcacacgggttgacgctggtcagtctggaccgggcggtgctcgaggaggtgttg
cgcaacaagaagatcgccccgatgctgggcgcccgcatcgacgacgacaccgtgatcgtg
cacaacagcgagcgcgggcgggtcaagcagatgctgctcaagatcgggtggccggccgag
gacttggccggctacgtcgacggcgaggcgcatccgatcgagctggcccaggacggctgg
cagctgcgcgactaccaggagatggccaccgactcgttctgggccggcgggtccggggtg
gtggtgctgccctgcggcgccgggaagaccctggtcggggcggcggccatggccaaggcc
ggggcgacgacgctgatcctggtcaccaacaccgtggccgggcggcagtggaagcgcgaa
ctggtggcccgcacctcactgaccgaggacgagatcggcgagtactcgggtgagaagaag
gagatccgcccggtcaccatcgccacctaccaggtgatcacccgccgcaccaagggcgag
tacaagcatctggagctgttcgacagccgcgactggggtctgatcatctacgacgaggtt
catctgctgccggcgccggtgttccggatgaccgccgatctgcagtcccggcggcggctg
ggcctgacggcgacgctgatccgtgaggacggccgcgagggtgacgtgttctcgctgatc
ggaccgaagcgctacgacgcgccgtggaaggacatcgaggcccagggctggatcgccccc
gccgagtgcatcgaggtgcgggtcacgatgaccgacaacgagcggatgctgtacgccacc
gccgaacccgaggaacgctacaagctgtgctcgacggtgcataccaagatcgccgtggtg
cgctcgatcctggagcgtcaccccggcgaaccgaccctggtgatcggtgcctacctggac
cagctggaagagctgggccaggaactggatgccccggtgatccagggttcgacgaagaac
gccgaacgcgaggcgctgttcgacgcgttccgccgcggcgagatctccaccctggtggtc
agcaaggtggcgaacttctccatcgacctaccggaagcctctgtggctgttcaggtttcg
ggcaccttcggctcccggcaggaagaggcccagcggctcggaaggttgttgcggcccaag
gccagcggcggtggcgcggtgttctactcggtggtctcacgtgactcgctggacgccgaa
tacgccgcacaccggcaacggttcctggccgagcagggctacggctacgtgatcaaggat
gccgacgatctgctggggccggcgatatga
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