Mizuhopecten yessoensis (Yesso scallop): 110440308
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Entry
110440308 CDS
T05079
Name
(RefSeq) nuclear pore complex protein Nup54-like isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110440308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110440308
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110440308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
110440308
NCBI-ProteinID:
XP_021338965
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MAFSGFGTGNTATPSFGTTAAAPPFGFGTATTSAAAPNLGFGTATGTTSAAPSFGSFGTS
TTSAPSFGGTTAQPFGFGGAPTTSVAPSFGFGGGIGATTSGPPPFAGFGTTTTSTGGLTL
GGSTGFGTGFGTSAAAPTGFGNFGGTSTFGGGTSGFNLGGTGTTGTGLLGGGATGTSLFG
VNQQQQQQQQQQQQQQQQNLQSLENLTTAITTPQLYGDERDAIIAKWNQLQAYWGTGKGY
FSQNGCVTFTPENPYCKFKAIGYSCLPTSRNEDGLVAVTIKRKESEVTVGQQLIVDCLFK
MLGSKPQYSVCVEGIRPLPDDKTELVVYILERPDRGPARRIPALETANFLKQTNILPQLQ
SQIMAEDIRPKTGFTKDQHKQYLDNTPSGIHPLIWQQAKLDNPDPGSLIPVPMVRFKELF
HRMKHQEQQTKLHHQRMDMIATDLTQLQQKQVSMLAKMDEYKRKHLELGHRLLQVVVKQE
IFRKMGYAIQAEEEQLRVQLEKSQAELNHPTQFKGRLNELMSQIRMQNHLASTRTDVSYQ
IDPALQDEIKQLLKQQQEGLRHLIQIIKEDGQDLQLIEQNLDAPIRR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggccttttccgggtttggcaccggcaacacagctaccccttcgtttgggacaacagcc
gctgctccgccattcggttttggtacagccacaacctccgccgcagctccgaatctgggg
ttcggaacagctactggcacgacatcggcggctccatcatttgggagtttcgggacgtcg
acaacgtctgctccatcgttcggaggcacgaccgcccagcctttcggatttggaggggcc
cccacaacgtctgtagctccttcgtttggttttggaggggggatcggagcaacgacgtct
gggccacctccatttgcaggattcggtacgacaacaacgtcaacaggaggtctcacacta
ggtggcagcaccggttttggaacaggatttggcaccagcgcagcagcgccgactgggttt
gggaactttggaggaacatcaacatttggaggcggtacttcagggttcaatcttggaggc
actggtacaacggggacaggtcttttgggtggaggagcaactggtactagtttgtttggt
gttaatcagcagcagcagcagcaacaacagcagcaacaacaacaacaacaacagaatcta
cagagtctcgagaacctaactactgccatcaccacgccacagctgtacggggatgaacgg
gacgccatcatagccaagtggaaccaactccaggcgtactgggggactggcaagggctac
ttcagtcagaatggctgcgtgaccttcactccagaaaatccttactgtaaattcaaggct
atagggtacagttgcctgccgacctcccgcaatgaggatggacttgtggcagtcaccatc
aaaaggaaggaatccgaagtgaccgttggtcagcagctgattgtggattgcctattcaag
atgctaggcagtaagcctcagtattcagtgtgtgtggaaggcattagaccactaccagat
gacaagacagagctggttgtatacatccttgaacgacctgatcgaggacctgcgcggcga
atcccagctctagaaactgctaactttctgaaacagaccaacatccttccccagctgcag
tcccagatcatggctgaggatatccgcccaaagactgggttcaccaaagaccagcacaaa
cagtatctggacaacacaccatcaggaatccacccccttatttggcagcaggccaagcta
gacaacccagatccgggaagcctaatccccgtcccaatggtccgatttaaggagctattc
catcgcatgaaacaccaggaacaacagacgaagctgcaccaccaaaggatggacatgatt
gccacagacctgacacagcttcagcagaaacaggtcagcatgctggcaaaaatggacgag
tataaacgcaaacacctggagctcggccacagacttttacaggtggtggtgaagcaggag
attttcagaaagatggggtacgctatacaggccgaggaggaacagttacgagtacagcta
gagaaaagtcaggccgaactgaaccatcccacacagtttaagggtcgcttaaacgagtta
atgtcacagattcgaatgcagaaccacttagcaagtacaaggacagatgttagttatcaa
atcgatcccgctctacaggacgaaatcaaacagttactaaaacagcagcaagaaggactg
cgtcacctcatacagatcattaaagaagatggacaagatctacagctcatagagcagaac
cttgatgccccgatcagacggtga
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