Mizuhopecten yessoensis (Yesso scallop): 110440481
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Entry
110440481 CDS
T05079
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03013
Nucleocytoplasmic transport
myi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110440481
03015 mRNA surveillance pathway
110440481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110440481
Enzymes [BR:
myi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110440481
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110440481
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Motif
Other DBs
NCBI-GeneID:
110440481
NCBI-ProteinID:
XP_021339262
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MADLDWGAAVDNQECSLVSQVKNLDIKTPENKAVSSATASTTNNKTTEPDPAVSKTTAPT
QTGSGDSPATNSTDTAVLDNNNSSKTDGDKPSSLNPSSPTPQAVDTGKEEPMSKLVRSKL
ITSVHADLEILQADPNSPLFSVKSFEALNLKKELLQGLYDMKFNAPSKIQETALPSLLAD
PPVNMIAQSQSGTGKTAAFVLTMLSRVDTNKPYPQCLCLAPTYELALQIGENIEQMSKHM
TNFTLVYAVRGERVARGQKVQGHIIIGTPGTVADWSLKFKSFDLKKIDVFCLDEADVMIA
TQGHQDQSIRIQRGLRKDCQMLLFSATYDDDVMRFAQAVIPNNPVVIKLRREEQSLDNIK
QFYIECTDKESKFQALSNIYGSISIGQSMIFCATRNTAHWLSEKMTKDGHAVGLLSGDLE
IAQRAAIINRFKDGKEKVLITTNVTSRGIDVEQVTVVVNFDLPLTQDMKPDNETYLHRIG
RTGRFGKNGIAINLIDNSRSYSTLRAIEKFFGRSIVKLDAEDIDEIEKIGT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcagatctggactggggagctgctgtagataaccaagagtgttctcttgtttctcag
gtgaaaaatctagacatcaagaccccagaaaacaaagcagtcagcagtgctacagcatct
actacaaacaacaaaacaacagaacctgatcctgcagtcagtaaaacaacagcacctaca
caaacaggcagcggcgatagcccagcaaccaacagcactgacacagctgtccttgataac
aacaactcttcaaaaacagacggtgataaaccaagtagtcttaatccaagtagtcctaca
cctcaagctgtggatacgggcaaagaagaaccaatgagtaaactagtgcggtcgaaactt
ataacatcagtccatgcggacctggagattctacaggccgaccccaactcaccactcttt
agtgtcaaatcttttgaagcattaaacttaaagaaggagctgttacaaggattgtatgat
atgaaatttaatgctccatcaaagattcaagaaacagctctgcctagcttactggctgat
cctccagtaaacatgatagcccagagccagagtggaacaggcaagacagcagcctttgtg
ctgaccatgctgagtcgtgtagatacaaacaaaccctacccacagtgcctttgtttagca
ccgacgtatgagctagcgttacaaatcggagagaacatagaacagatgtcaaaacacatg
acaaacttcaccctggtttacgctgtaagaggagagagagttgccagaggacaaaaagtt
caaggtcacatcatcattggtaccccaggaacagttgctgactggtcactcaaatttaaa
agctttgacctgaagaagatcgatgtgttttgtttagatgaggctgatgtcatgattgcc
actcaaggtcatcaggaccagtcaattaggatacaaagaggactaaggaaagattgtcag
atgttgttattttcggccacatacgatgatgacgtgatgagattcgctcaagctgtgatc
ccaaataaccctgttgtgatcaaattgcgacgtgaagaacagagtttggacaatattaaa
caattttacattgagtgtacagataaagaaagcaaattccaggcattatcaaatatatat
ggatccatttctataggacaatctatgatcttttgtgcgacacggaacacagcccattgg
ttgtcggaaaagatgaccaaggacggccatgctgttgggctgttgagtggagatcttgaa
atcgcacagagagctgcaatcatcaacagattcaaggacggcaaggagaaagttcttatt
acaacaaatgtaacttctagaggtatagacgtagaacaggtgacagttgttgtgaacttt
gaccttcccctaacacaagacatgaaaccagacaacgaaacgtatctacatcgtattgga
aggacaggtcgatttgggaaaaatggaatcgctatcaatctcatcgacaactcacgatct
tacagcactctcagggcgatagagaaatttttcggacgaagtatagtcaaactggatgct
gaagacattgatgaaattgagaagattggtacatag
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