Mizuhopecten yessoensis (Yesso scallop): 110440483
Help
Entry
110440483 CDS
T05079
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33-like
KO
K15542
polyadenylation factor subunit 2
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110440483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110440483
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110440483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_DCAF12
Tricorn_2nd
Beta-prop_WDR41
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_WDR11_2nd
PROPPIN
Motif
Other DBs
NCBI-GeneID:
110440483
NCBI-ProteinID:
XP_021339267
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MDGGVATEAPRYGGQRMGRGYGRGGFGRGGGQQGGDSGGAMGQAVMFDGKRMRKAVHRKT
IDYNSAVINYLQDRIWQRDHRDRRALQPESLYQIELTPPLHMKDNPMNCVTTKFIRTSTN
KFRCPIFCLAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDTSVRAMQWSHNDQWM
VTADHSGFIKYWQTNMNNVKMYQGHKEPVRGISFCPTDNKFATCSDDGTVRIWDFMKCHE
EKILRGHGADVKCVDWHPQKCLIASGSKDNQQPLKLWDPKSGTSLATIHAHKGTVMNLKW
NQNGNWLLTASRDHLMKLFDIRNMKEEFQTFKGHKKEATAVAWHPVHEGLFVSGGSDGAV
MFWMVGTDREVGGMEEAHEGMVWSLAWHPLGHILVSGSNDHTTKFWTRNRPGDRMRDKYN
LNTLPGGSEHEMPEFELDNSGMSNIPGMGITPAEKLMNDQIRNNQDNEVGADELPTIPGL
DWSADEQFFREQQLLKEIPKKKIPYARPIPWEFEQAWMVKHTGLLVPDGEGEEMTGGGGS
GGSGSREKRRERRRMKQANERANENQQGPDEGPPNNSNPQSLMQQGPMGQPNQMMGPGNQ
NNAPNMMGPGQGNMQGRGLLGNQPAGWGQQGPGGQGMRQQGPGQQNQNMPQGGGRSQGLM
GPPRMQGQNQGGQGFQQKDQDLRGGQWNQGQSGNQGNFGNKDMGNNNQFQGDQDFRSDQD
FRGDQDFRQQQQRNDNNNQNFNDGQAFNRRGSGIQRGGGKQRGSSGNQWENQRGGNDRNT
NFGGDHGNFSNHGNDNFMDQDDRFEGQGGGGANQNRGRGRGQDDRRHGRRSEGGHNFGGS
QENFGNKRQWEEGPGDFRQGNQVPSDMDGDQSGGWGQRGRNFSSPGRGGNRGRGGRGGDR
GRGGDRGRGGDRGGNRGGNRGGDWSGGRGFGGGGGGR
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggatggtggagtagcaacagaagctccaaggtatggtggacagcggatggggcgaggg
tatggcaggggaggattcggtcgtggaggaggccaacaggggggagactctggaggagct
atgggacaggccgtcatgttcgacggaaaacgcatgcgaaaggcagtccatagaaaaacg
atagattataactcggcagtgatcaactatctacaggataggatatggcagcgagatcac
cgggatagacgagcccttcagccagagtccttgtatcagattgagcttacacctcccctg
catatgaaggacaaccccatgaactgtgtaaccaccaaattcatccgtacctccacaaat
aagttcagatgtccaatcttttgcttagcgtggacaccagaagggaggcgtttagtgacc
ggagcatctagtggagagttcacgctgtggaacggtctgacctttaactttgaaactatt
ctgcaggcccatgacacatcggtaagagcgatgcaatggagccacaatgaccaatggatg
gtgacggcagaccattcaggcttcatcaagtactggcagaccaacatgaataatgtgaag
atgtaccagggtcacaaggaacccgtgcgcgggataagtttttgtccaacggataataaa
tttgcgacttgctcagacgatggaacagtccgaatatgggattttatgaaatgtcatgaa
gaaaaaattttgagaggtcacggagcagatgtcaagtgtgtggactggcacccccagaag
tgccttattgcctcgggcagcaaggacaaccagcagccactcaaactatgggaccccaag
tctggcaccagcctggccacaattcatgcccataaaggcaccgtgatgaacctgaagtgg
aaccagaacggtaactggctgttgacagcctccagagaccacctcatgaaactatttgac
attcggaacatgaaagaggagtttcagacctttaaaggacacaaaaaggaggctacagcg
gtagcctggcacccggttcacgaagggctgtttgtgagcgggggatctgacggggctgtc
atgttctggatggtcgggactgacagagaggtcggagggatggaggaagcccatgagggc
atggtgtggagtctggcctggcatcctctgggccacatccttgtgtccggctccaacgat
cacactacgaagttttggacgcgaaatcggcctggtgaccgaatgagagataaatacaac
ctgaatactttaccaggaggatctgaacacgagatgcctgaattcgagctggacaattca
gggatgagcaacattccagggatggggataactccggctgaaaaactgatgaacgatcag
ataagaaacaatcaagacaatgaagttggtgcggatgaactgcctaccattcctggcctc
gactggtcagcagacgaacagttcttcagggaacagcagcttcttaaagagatacccaag
aaaaaaattccttatgctcgccccattccctgggaattcgagcaggcgtggatggtgaag
cacacaggcctcctcgtgcctgacggagagggagaggaaatgacaggtggtggaggaagt
ggagggtcaggaagtagggaaaaacgcagggaaagacgcaggatgaaacaggccaatgaa
agagcaaatgagaaccaacaggggccggatgaaggcccaccaaacaacagtaatcctcag
tcactcatgcagcaaggtccgatgggtcagccaaaccagatgatgggtccagggaaccag
aacaatgctccaaacatgatgggtcctggacagggcaatatgcagggtagagggctactg
ggcaaccagccagcaggatggggtcaacagggccctggaggtcaaggcatgaggcagcag
ggaccaggacaacagaatcagaacatgccacagggaggtggacgatctcagggtttgatg
ggaccccccaggatgcaaggtcaaaatcaaggtggtcaaggattccagcaaaaggatcag
gatttacgaggaggacagtggaatcaaggtcaaagtggaaaccagggtaactttggtaac
aaagacatgggtaataacaaccagtttcaaggtgaccaagatttccgcagtgatcaggac
ttcaggggagatcaggatttccgccaacagcaacagcggaatgataataacaaccaaaac
tttaatgatggccaggcatttaaccgcagaggaagtggtattcagcggggtggtggtaaa
caacgaggttcctctggtaaccagtgggaaaaccagagaggtggtaatgaccggaacact
aattttggtggtgatcatggtaacttcagtaaccatggtaatgacaatttcatggaccaa
gatgatagatttgagggtcaaggcggaggtggtgctaatcagaaccgtggtaggggaagg
gggcaagatgaccggcgacatggtcgtagaagtgaaggggggcacaactttgggggttcg
caggagaactttggtaacaagagacaatgggaggagggaccgggtgattttcgacaggga
aaccaggttccttctgacatggatggtgaccagtcaggaggatggggtcaaagaggacgt
aatttctcaagtccaggtcggggaggtaaccgaggtcggggagggagaggaggtgacaga
ggtaggggtggtgacagagggaggggtggtgacagaggaggaaataggggaggtaatagg
ggtggagactggagtggggggcgggggtttggaggaggtggagggggcaggtaa
DBGET
integrated database retrieval system
