Mizuhopecten yessoensis (Yesso scallop): 110440544
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Entry
110440544 CDS
T05079
Name
(RefSeq) protein trachealess-like isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
myi03000
]
110440544
Transcription factors [BR:
myi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110440544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
PAS_9
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
110440544
NCBI-ProteinID:
XP_021339352
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MNEQAFFHWDLIRPTLQPQAFGMGASLLDFSNAFAWEAPEGSRFGILELRKEKSRDAARS
RRGKENYEFYELAKLLPLPPAITSQLDKASIIRLSISYLKIQDFSSHGDPPWAQNAAHAK
SLKGHSRRRNIANLALDVFESHQGTHILQSLDGFAFALASDGRFLYISETVSIYLGLSQV
EVTGSSIFDYVHVQDHQELAEHLGLGFPHTSSSSGAPSPGSQSDEGSAPSTPCVLSSPLP
ERACLMSPNDKSVERSFCLRMKSTLTKRGVHVRTSGYRVVYVVLKQRPQICFSLNRKHPP
QIMGMVGLAIALPPPTITELRIESDTFIMRLNPDFSIIYCDTAVSELTDWSSEDINNKIL
YDFCHPGDLKKLRRSHLDINTKGQVLSDYMRLMNKCGGYVWIQVCGTTLYSSKTSDDHTI
LIIIYVLSGVEYGGCVMDTSQLLTTGPTETDHSDNTDQSEQGSDHGGRGHKDNFHRPGAS
PGSDSKDPSSLRVTSPVSSSTTLQRSVRSDSQEADSSHDNKPFIVNSTQTNNNFHSKNCE
STVGNVLQDKVHLLKTDYKNSRRKADRPKRRRRDYDVDCLSAEVEDFQSSVSKHSSLDQD
RCCEVSSVCQTNAIMGTVDSTERSSCSVPEDLSLHNFTMRQAAVVSTPGCESQNNISVSC
WQNGTKERKKERDMRENPSSSVKDLEDVMNKHLPNLTNHIEAGVRTSPNDLTSSRHMSSS
LQKQHSTIQWRASTDTDTLPASTLLRTLYANRESVIRSSARPQCFSGDNTQGVDSVDMLT
PPSNEASLKEQLTLNIPQITVNNSKCVQGGYTNPLSVTVHSTLPDSFSMTPPSSVSPEDK
VTTSFMETNFDPSPVSCHMVTGPTATNPVKSMAMSPPSQAMPAHTDYNTCSKVGYGNMSP
YQIAEYQQYLHNGAPNSLYDARPEGWYPVSYTS
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagcaagcgtttttccattgggatctgattcggccgactctccaacctcaggcg
tttggcatgggggcatctctgcttgattttagtaatgcctttgcctgggaggctcctgag
ggttccagatttggtatcctggaactcaggaaggagaagtcgcgtgatgctgctcggtca
aggcggggtaaagagaattatgagttctacgagctagccaagcttttaccccttccgcca
gccattactagccagctggacaaagcctccatcattcggttgtctataagctatctcaaa
atccaggacttctcgtcacatggtgacccgccctgggctcagaatgctgctcacgccaaa
tctctcaaagggcacagccgtcgacgcaatatcgccaatctagccctcgacgtgtttgaa
tctcatcaaggcacccatattttacagtcactggatgggtttgcgtttgctctggcaagt
gatgggcgattcctatacatatccgagacagtttctatatacctcggcctttcacaggtg
gaggtcaccggcagcagtatatttgactacgtccacgtccaagatcatcaagaactggcc
gaacacttaggattgggatttcctcacacctccagcagtagtggtgccccgtcccccgga
tctcaatcagacgagggctcggccccctcgacaccctgtgtcctgtcctccccactccca
gaaagagcctgtctgatgtcgccaaatgataagtcggtagagcggtcattttgtctgaga
atgaagtcgacgctgacaaagcgaggcgtacatgttaggacgtccgggtacagggttgtg
tatgttgtgctaaaacagcgcccccagatctgtttttccctgaacaggaagcatccccct
cagatcatgggtatggtgggtttggccatcgccctgcctcccccgaccatcacagaactc
cgtatagagagcgacaccttcattatgaggctcaatccagacttcagcatcatttactgt
gatacagcggtttccgaactgacagattggtccagtgaagatatcaataataaaatattg
tacgacttctgccaccctggtgacctcaagaaactacgcagatctcatttagacattaat
acgaagggccaggtgctgtctgattatatgcggttgatgaacaagtgtggagggtatgtg
tggatccaggtgtgtggtacaaccctgtacagctcaaaaacgtccgacgaccacacgata
ctgatcatcatttatgtactgagtggtgtggagtatggaggctgtgtgatggacacaagt
cagctactgaccacaggaccaacagagactgaccattcggacaacactgaccaaagcgag
cagggctcagaccatggaggcaggggtcacaaggacaactttcaccgcccgggggcgagt
cctggaagtgacagtaaggacccttcgagtctgagagtcacatcgcccgtgtctagttcc
acgacactgcagcggtcagttaggtcggactctcaggaggctgacagcagtcatgacaat
aaaccattcattgtgaatagtacacagaccaataataattttcattccaagaattgtgaa
tccacagtgggcaatgtcctgcaggataaagtacatttgttgaaaactgactacaaaaat
tcacgtagaaaagctgaccgaccaaagcgtcggcgacgagactatgatgtagactgtctt
agtgcagaagtagaggacttccagtcttctgtgtccaaacacagctcactggaccaggac
aggtgttgtgaggtgagctctgtctgtcagaccaacgccatcatgggcactgtggacagt
actgagcggtcaagctgtagtgttcccgaggatctctctctccacaacttcaccatgagg
caggctgccgtggtcagcaccccgggctgcgaatctcaaaataacatttctgtcagttgc
tggcagaacggcaccaaagaacgcaaaaaggagcgagacatgcgagagaatccgtccagt
tctgtcaaggacttggaggatgtcatgaataaacatttgccaaatctgaccaatcacatt
gaagcaggtgtaaggacttcccctaatgatctcacatcaagtcggcacatgtccagctct
ttacagaagcagcactcaaccatccagtggcgggccagcaccgacactgacactctgccc
gcctccactctgttacggacactgtatgctaatagggagtccgtcatacgcagcagtgcc
cgcccccagtgttttagtggggacaatacacagggtgtagactccgtcgatatgctcacc
ccgcccagtaacgaggcgagtctcaaggaacagctgacgctgaatatccctcagattact
gtgaacaatagtaagtgtgtgcaggggggctacacaaatcctttatcagttacggttcac
agcactctcccagacagcttctccatgaccccgccatcatctgtgtcacccgaggacaag
gtcacgacctccttcatggagacgaactttgaccccagtccagtctcatgtcacatggta
actggtcctacggcaaccaacccagtgaagtccatggccatgtcacccccatcacaggct
atgcccgcgcatacagactacaatacgtgcagcaaggttggctacggcaacatgagtccg
tatcagattgccgaataccaacagtacctacacaatggtgcccctaactccctgtacgac
gctagaccagagggctggtaccctgtctcctacacatcataa
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