Mizuhopecten yessoensis (Yesso scallop): 110441881
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Entry
110441881 CDS
T05079
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110441881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
myi03041
]
110441881
Enzymes [BR:
myi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110441881
Spliceosome [BR:
myi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110441881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
WHD_HA2
HA2_C
DEAD
AAA_22
AAA_19
PWI
nSTAND3
AAA_30
GIPC1_GH2
Flavi_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110441881
NCBI-ProteinID:
XP_021340842
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MEMLETWVNDKLHDIVGISDKHITQYMIGLAKKAASTEHFVESIKDTGVIDIDTNVLGFA
RELWGKVPHKAEAEKVGRKREREALELQKKNDSYTVLSDEDSEEETYLPKKKEKKDRKQK
HFRKKRESSDESSEEESRMNLDKDDPLTDSDSEDEFDQQEQQRLQDIDERDQFAKRLRDK
DKASTRQIMSKSEKKALEEAKKRLEMEAEDKKKLIPEIREKSRQEYLKKRGTQKLEDLEA
DIIDEEYLFSETKLTEKERKNLNYKKKVLEIAKDHRRAGEKEKVNRYHMPKEDDKPSERY
EEEVLEKGVNSEQQRWEEDHLGAAIMKFGARDAKQRAKEKNKTKDYDFIMDEEIEFVQAL
QMPGSKKTKDKEPEMSDAERKKMTIEECKKSLPVFPFKQDLLDAIEEHQVLIIEGETGSG
KTTQIPQYLHEGGFTKNGMKIGCTQPRRVAAMSVAARVAEEMGKKLGNEVGYSIRFEDCT
SDRTIIKYMTDGMLLREFLGEPDLASYSVMIIDEAHERTLHTDVLFGLVKDIARFRPDLK
LLISSATLDAEKFSAFFDDAPIFRIPGRRFPVDIYYTKAPEADYLDAAVVSVLQIHVTQP
SGDVLVFLTGQEEIESCNEMLQERTKKLGSKIKELIISPIYANLPSDMQAKIFEPTPPGA
RKVVIATNIAETSLTIDGIKYVIDPGFCKQNSYNARTGMESLIVTPISKASANQRAGRAG
RVSAGRCFRLYTAWAYKNELEDNTIPEIQRTNLGNVVLMLKSLGINDLIHFDFMDPPPHE
TLVLALEQLYALGALNHRGELTKLGRRMAEFPVDPMMSKAILASEQYKCSKEILSVCAML
SVNNAIFYRPKDKVVHADTARQNFFRPGGDHLTLLNVYDQWEETSHSTQWCYENFIQHRS
MKRARDVRDQLEGLLERVEIEMTTSPGDTIAIRKAITAGFFYHTARLGKGGNYRTVKHQQ
TVLVHPNSSLFEDRPRWLIYHELVFTTKEFMRQVIEIENSWLLEVAPHYYKSKELEDTSK
RKMPKNTGKTLDDVTRQY
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggagatgcttgaaacttgggtgaatgacaagcttcatgacattgtcggcatttcagac
aagcatataacccagtacatgataggattggcaaaaaaagcggcctcaacagagcatttt
gtcgagtccatcaaagataccggagtcatcgacatcgacacgaacgttttaggttttgcc
cgggaattatggggaaaggtaccgcataaagctgaggctgagaaagtcgggaggaaaaga
gaacgagaggcactagagttacaaaagaaaaatgacagctacacagttctgtcggatgag
gacagtgaagaagaaacttatttacccaaaaagaaggaaaagaaagatagaaagcagaaa
catttcaggaaaaagcgcgaatcgtctgatgaaagcagtgaagaagaaagtcggatgaac
cttgataaagatgacccgctgacagactcggactcggaggatgagtttgaccaacaggaa
caacagagattacaggacattgacgagagggatcaatttgccaaacgccttcgtgacaaa
gacaaagccagcacacgccagatcatgtctaagtcagagaaaaaggctttggaagaagca
aaaaaacgtttggaaatggaggcagaggataagaaaaaacttattcctgaaataagggag
aaatcccgacaggagtacctaaagaaaagaggaacacagaagctggaggacttggaggct
gatatcatagatgaggagtatctcttttctgaaacaaaactaacagaaaaggaaagaaaa
aatctgaattataagaagaaagttttggaaatagccaaagaccatcgacgagcaggggaa
aaggagaaggtgaaccgttaccatatgccaaaggaagacgacaagccatctgaacgctat
gaggaagaggtccttgaaaagggagttaactctgaacaacagcgctgggaagaggatcat
cttggtgctgctatcatgaaatttggggcgcgtgatgctaaacaacgagcaaaagaaaaa
aacaaaaccaaagactatgatttcatcatggatgaggaaatagaatttgtgcaggcacta
cagatgccaggaagtaagaaaaccaaggataaagagccagagatgtcggatgcggagagg
aagaagatgacgatagaagaatgtaaaaagagccttccagtgtttcctttcaagcaggat
ttattggatgctatagaggaacaccaggtcctcattattgagggggagaccgggtcagga
aagaccacacagatcccacagtacctacatgaagggggtttcacaaagaatggcatgaag
attggatgtacacagccgcggagagtggcagccatgtcagtggcagctcgtgtggccgag
gaaatgggcaagaaactgggaaatgaggttgggtacagtatccgttttgaagattgtacc
tcagataggactatcataaagtacatgacagatggtatgttactgagagagttcctgggg
gagcctgacctagccagttacagtgtgatgataattgatgaggcccatgagcgtaccctc
cacacagatgtcctgtttggactggtcaaggacatcgcccgcttcagaccagacctcaag
cttctcatatcaagtgctacactggacgcagaaaaattctccgcgttttttgatgacgcc
cccatctttcgcattcctgggcgacgttttcctgtggacatctattacaccaaggctcca
gaggctgactaccttgatgctgctgttgtgtctgtactgcaaatccatgtaacacagcct
agcggtgacgtcctggtgttcctcacaggccaggaggagattgagtcatgtaacgagatg
ttacaggagagaactaagaagcttgggagtaagataaaggaattaatcatctcgccgatc
tacgccaaccttccatcagacatgcaggccaagatatttgagcccacacccccaggagcc
aggaaggttgtcatagctaccaacatagccgagacatctttgacaatagatggcatcaag
tatgtcatagatccaggcttctgtaaacagaatagctacaatgctaggacaggcatggag
tccctcattgtcacacctatatctaaggcctcagctaaccaacgagcaggtcgtgcggga
agagtgtctgcggggaggtgttttcgtctgtacacggcttgggcgtacaaaaacgagctt
gaagataatacaataccagaaatccagcgaactaacctgggaaatgtggtgctcatgctc
aagtcactgggcatcaatgaccttattcattttgacttcatggacccaccaccccacgag
acccttgtcctcgccctggaacagttgtacgctctcggggctctcaaccatcgtggagag
ctcactaaactggggcgtcgcatggctgagttccccgtagaccccatgatgtccaaagct
atattggcatcggagcaatacaagtgctctaaggagatcctgtcggtttgtgctatgctg
tccgtcaataacgctatattttaccgccctaaagacaaggtcgtccatgctgacacagct
cgacaaaactttttccgtccaggtggtgaccacctgaccctgctgaatgtgtacgaccaa
tgggaggaaacctctcactccacacagtggtgctacgagaacttcattcagcatcggtcc
atgaagcgagctcgggatgtccgcgaccagctggaggggctattggaaagggtggagatc
gagatgaccaccagccctggtgacaccatagctatccgcaaggccattactgctggattt
ttctaccacactgcacgacttggcaagggaggtaattaccggactgtgaagcatcaacag
acagtcctggtccaccccaacagtagcctatttgaggaccgacctcgctggcttatttac
catgaacttgtgtttactaccaaagagttcatgagacaggtgatagagatagagaactcc
tggctcctagaggtcgcacctcactactacaagtctaaagaactggaggacacctcaaaa
cggaaaatgccaaaaaatacagggaaaactctggatgatgttacaagacagtattga
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integrated database retrieval system
