Mizuhopecten yessoensis (Yesso scallop): 110441936
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Entry
110441936 CDS
T05079
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110441936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
myi03041
]
110441936
Spliceosome [BR:
myi03041
]
Complex B
Other components
Prp19-related factors
110441936
Complex C
110441936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
RRM_YTH1
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH_4
zf-CCCH
RRM_3
zf-CCCH_DUS3L
RRM_PARP14_3
zf-CCCH_PARP12
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
110441936
NCBI-ProteinID:
XP_021340925
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MAASKGANTYNRQNWEESDFPILCQTCLGDNPYIRMMKEKYGKECKICARPFTVFRWCPG
ARMRFKKTEVCQTCSKIKNVCQTCLLDLEYGLPVQVRDAALKIQDNMPKSDVNKEYYTQN
MENEIANGDGTVAPGQLGKAQTPSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHDKPTDPDDPLADQNIKDRFYGMNDPVADKLMNRYTNMPKLDAPEDKAITTLYVGNLG
DKIGETELRDHFYQFGEIRSINIASKQQCAFVQFTTRQAAENATEKSFNKLIMGGRRLNI
KWGKSQAQMGVTKKDGEESEKALEPVPGLPGALPPPPEEIANNFFNLNNAPNHLPMPPGP
PRGMPPRLIHPGTHMMPFGMFRGPPPPGVRLPPPPPGMMPMRPPPRLMMGANMPVHYPSQ
DPTRMGAITTSSSKS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctctaaaggagcaaatacgtacaatcgacaaaactgggaagaatctgatttc
ccaattttatgtcaaacatgtcttggagacaatccatacatacgtatgatgaaagagaaa
tatggaaaggagtgtaaaatctgtgcacgtccttttacagtgttcagatggtgtcctggt
gcacgtatgaggtttaaaaagacagaagtttgtcaaacatgttcaaagatcaagaatgtc
tgtcaaacttgtctcctagatctggaatatggcttacctgtgcaggtgagggatgcagca
ttgaagatccaggacaacatgccaaaatctgatgttaacaaagagtactacacacagaac
atggagaacgagatcgccaatggggatggcactgttgctccaggacagttgggtaaggcc
cagacacctagtgacatgctgctcaaacttgcccgtaccacaccatactacaaacggaat
agaccccacatctgctcgttctgggtgaagggggagtgtaagaggggagaggagtgtccg
tacagacacgacaaaccgacagatcctgatgatcctctggcagatcaaaacatcaaggac
agattctatgggatgaatgacccagtggcagacaaactgatgaaccgctatactaatatg
ccgaagttagatgccccagaggataaagctatcacaacgttgtatgttggaaatcttgga
gacaaaataggagagacagaactcagggaccacttctaccagtttggagaaatcagatcg
atcaacatcgccagtaaacagcagtgtgcatttgtacagttcacaacacgacaggcagct
gagaatgccacagagaagtcttttaataaattgatcatgggtgggcgacgtctcaacatc
aagtggggtaaatctcaagcccaaatgggggtcacaaagaaagatggagaggagtcagaa
aaggcccttgagccagtaccaggccttccaggggccttgcctccaccaccagaagaaatt
gcaaataatttctttaacctaaacaatgcccccaatcaccttcccatgccacctggcccc
ccaagaggaatgccacctcgcctaattcacccaggcacacacatgatgccgttcgggatg
ttccgtggacctcccccaccaggtgtgcggttacctccccctccccctggaatgatgcca
atgcgccctcctcctaggttgatgatgggggccaacatgccagttcactacccctcacag
gacccaacaaggatgggtgcaatcactacaagcagcagcaaatcttaa
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