Mizuhopecten yessoensis (Yesso scallop): 110442006
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Entry
110442006 CDS
T05079
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03013
Nucleocytoplasmic transport
myi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110442006
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110442006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110442006
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110442006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Nup153
Motif
Other DBs
NCBI-GeneID:
110442006
NCBI-ProteinID:
XP_021341058
LinkDB
All DBs
Position
Unknown
AA seq
1576 aa
AA seq
DB search
MSEEGGGKIRNKKLSNPPKPYEKRKSFLGKVTDTVKELISPSWLSDLVNSVKKTSPQKED
EQPVPPTQEPQYMSSLQSHQHHNRNQVRDGSQFSPPKFVPLTRNGLANLSPRSSLPLIPS
LPPQQPPLQQSQPPLTFCNQSSDVGEISRKSHAQPSIFLSDSKSVDGNRNFLSNCTVGRG
RLDNEGFAGSSDASARPGPSNTEVNPADISTVCNHNESMEGDEQEESLPVSVNRLNKSTT
WTEGFNARKPRSSSRNKPGFDISLFGVPLHNNSLLGDSSHESSFYPGKTTYGGASAQRKP
RLNVTGPYQASFPMRQKMKVKPVNTSTSAATSSTAQKILETLEKMSTPLSEARKIPNDDT
VLRLNSSFNPTNYKPARHSIGSYLNTRRELQKSQSGPPTGKVSTPVPASISRNYQRVTVP
QTQPGKNFLNEKTSMSTIQQIPQEKEKMPSSASGGGKLKSKKFQQHFPGRKSAEDDDEEV
EMSNLRTDFTLPVVGIPQFDFGTSQSTKPVEGKGNKPNSKYTFATPIQKTPTKQADQVSP
TKIDFTFSSPLSMDIENGVKPKSVTFDIEPVKVQESPAAFSPPAFKFGSPLGLKSSSNLG
ASPVLPKSSGGMAPATELKSGSVMDVLGKSGGSGFSFNTGSSTNKINSETSSMGGFKPAS
ELKQGSVMDVLGGTPKTSSSSFGSGFQPAKDLKKGSVMDVLGKSSQEDSKPGLSTMFKVA
EGSWECDVCCINNKADVSKCAACGAKKPGGSGNASVPSSQPSLSSMFKVAEGSWTCDACM
VQNKSADTKCVACQTKKPGASGTPASSSQPSLSSMFKVAEGSWTCDACMVQNKSADTKCA
ACQTKKPGATGTPAPSSQPSLSSVFKVAEGSWTCDACMIQNKSADTKCAACQTKKPGAAV
LAPSSQPSLSSMFKVAEGSWTCDACMVQNKSADTKCAACQTKKPGATGSANSPIKDSLVS
KFKRPTGNWECDTCLVPNNATATKCIACETPRPGLQPSSSFGLKFGGVSVKNTTSLVGQS
GFKFGVSNKDSSDTKSTSSSGAGQLSFGIPVSSSNSTSESSKSSTDVAGGIKFGTGEISS
GGGASVGGFKFGSASSTPTVTPTTGFKIGSLAAPKSDALTGGFQMPSAKSSPAVDISQNK
TDSSSTFKSLFGVDKSEITSGPKTDSTSGKVSNGSVSIPVSSSPAVGFQFGAPTKSLPPF
STGSGFTVTKSSEETPKPMPLFNVQSPASTAAAPSLKRSHNEENGPSDAKRASFNMFTAG
TTAEPAKSVGNNILFGSTATVPAATTQASIFQAPTAPTSTLSTTASTAPTGGFSFGMGGN
SASTGGIGTSSFGETAKNPPGFNFSAETNKTSVFSFGAGSGTATATTAPVFGASANNTVA
KTSASSAPFSFTAQSSIPATPFGSAQESTHAFAANTSGFGSTPNMFAGSNNTPSFGASGA
VPPSGFGAAATGFNTTSAGNTPAFGAATTTANANTGSTGGFNFASQQQGFNFSAQQSTVN
NGVFQFGAKPGEGTPAAAPPQAPAGFNFNASSTPGFNFGQSTQPAMPVGTGSFNIGSNND
ASSGRKIKKAVRKIRR
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaggggggtggcaaaataagaaacaagaaattatcgaatccaccgaaacct
tatgaaaagcggaaatcattcctaggaaaagttacagatactgtcaaagaactaatatct
ccatcttggctatctgacttggtgaatagtgtgaaaaaaacaagtccccagaaggaagat
gagcagcccgtacctcctacccaggaaccacagtatatgagttctctgcagtctcaccaa
catcataataggaatcaagtgagagatggttctcaattttctcctccaaagtttgtacca
ttgacaagaaatggtctagccaacctttcccccaggtcttctttacctctgataccctcc
ttgccacctcagcagccgcccctacagcaatcacaaccaccactgacgttctgtaaccag
agcagtgatgttggagaaatctcaagaaaaagccacgcacaacccagcatatttttatca
gattcaaaatccgttgatgggaacaggaactttctcagtaactgtacggttggtaggggt
cgattggacaatgaaggttttgcgggatcaagcgatgcatctgccagaccaggaccaagc
aacaccgaggtgaacccagcagacatatcaactgtctgtaatcacaatgagagcatggaa
ggagacgagcaggaagaaagtctaccagtatctgtaaatcgtttgaataaatcgacaact
tggactgaaggtttcaatgcaagaaaaccgagatcatcaagtcgcaacaagcctggattt
gacatatccttgtttggggtaccgctacataataattcactgttgggggacagttctcac
gagtcctcgttttatcctggcaaaacaacatacgggggagcgtcagcgcagagaaaaccc
agactaaatgttacaggaccttatcaggcatcttttccaatgcgtcagaaaatgaaggta
aagccagtcaatacatctacaagtgctgcaaccagctctacagctcaaaagatcctggaa
acacttgaaaagatgtcaactccattatcagaggccaggaaaatacctaatgatgacaca
gtattgcgtctgaattcttcatttaatcccacaaattacaaaccagcacggcacagcatt
ggctcctatcttaacacacggcgagaattgcagaagtcccagagtggtccaccaacagga
aaggtgagcacgcctgtaccagcctccatcagtcgcaactaccagcgggtcactgtccct
cagacacagccaggcaagaattttctaaatgaaaagacatccatgtcaacaatccaacaa
atcccacaggaaaaagagaagatgcctagttctgcttcaggaggtggaaaactgaagagt
aagaaatttcaacaacacttcccaggccgaaagtcagctgaggatgatgatgaagaggtg
gagatgtcaaatttacgtacagatttcacactgcctgtggtgggcatccctcagtttgat
tttggaacatcacagtctaccaagcctgttgaggggaagggaaataagccaaactccaag
tatacatttgcaacccccatacagaagacgcccacaaaacaggcagaccaggtctcgccc
acaaaaatcgacttcaccttcagttcaccgctaagtatggacattgagaatggtgtgaag
cccaagtctgtcacatttgacatagagcctgtgaaagtccaagagtcgccagctgccttc
tcgccacctgccttcaaatttggaagtccattgggtttaaagtcttcttcaaatcttgga
gcatcaccagtacttcccaaatcctcaggagggatggcacctgctacagaactgaagtct
ggtagtgtgatggatgttcttggtaagtcaggtggaagtggcttcagtttcaacacagga
tccagcaccaacaagattaacagtgaaacatcaagtatgggtggcttcaaacctgcatct
gaactgaagcaaggcagtgttatggatgttctaggagggactcccaagacaagttcatca
tcatttggttccggcttccaacctgcaaaggaccttaaaaaaggcagtgtgatggatgtt
ctaggcaagagttcacaagaggacagcaaacccggtctgtctactatgttcaaagtagca
gaaggcagctgggaatgtgacgtatgttgtatcaacaataaagctgatgtctctaagtgt
gcagcttgtggcgccaaaaagccaggtggctcaggtaatgcctcagtaccatcgagtcag
cctagcctgtcctccatgtttaaagtggcagagggatcttggacttgtgacgcctgtatg
gtacaaaataaatcggctgatacaaagtgtgttgcttgtcagacaaagaaacctggagcc
tcaggcaccccggcatcctcgagtcagcctagcctgtcctccatgtttaaagtggcagag
ggatcttggacttgtgacgcctgtatggtacagaataaatctgctgatacaaagtgtgcc
gcttgtcagacaaagaaacctggagctacaggcaccccagcaccatccagtcagccaagc
ctgtcctctgtgtttaaagtggcagagggatcttggacttgtgacgcctgtatgatacag
aataaatctgccgatacaaagtgtgccgcttgtcagacaaaaaaacctggcgctgcagta
ttggcaccctcgagtcagcctagcctgtcctccatgtttaaagtggcagagggatcttgg
acttgtgacgcctgtatggtacagaataaatctgccgatacaaagtgtgccgcttgtcag
acaaagaaacctggagctacaggttctgctaattctcctataaaggacagtttagtttcc
aaattcaagagacccacaggaaactgggaatgtgatacctgcctagttccaaataatgca
acagctaccaaatgtatagcatgtgagacacctaggccagggcttcaaccctcaagttct
tttggattgaaatttggtggtgtttctgtcaaaaacacaactagtttggttggacaaagt
ggttttaaatttggtgtttctaacaaagattcatctgacactaaatctaccagctcatct
ggagcaggacagttatcttttggaataccagtttcaagtagcaattccacctcagaatca
tccaaaagctcaacagatgtagctgggggtattaaatttggaactggagaaatttcttct
ggtggtggtgcaagtgttgggggctttaagtttggatctgcatctagcacaccaaccgtc
actccaacaactggcttcaaaattggttcattagctgctcctaaaagtgatgctctaaca
ggcggttttcaaatgccatctgcaaaatcttcgcctgctgttgatataagtcagaataaa
actgatagttctagtacatttaaatctctatttggtgtggacaaatctgaaataacatcg
ggtccaaagactgattctacctcaggaaaagtgtccaatggaagtgtgtcgattcctgtc
tccagttctccggctgttggttttcagtttggagctcctacaaaatctctccctcccttc
agtactggatctggtttcactgtgactaaatcatctgaagagactcccaaaccaatgccc
ttatttaatgtacaatcaccagccagcactgctgctgcaccgtccttgaaaaggagtcac
aatgaagagaatggtccaagtgatgccaagagggcatcttttaatatgttcactgctgga
acaacagcagagcctgcaaagtcagttggaaacaacattttatttggctcaacagccacc
gtaccagctgctacaacccaagcctcaatattccaggcccccacagcccctacctcaacc
ctgtctaccacagcatccacagctccaactgggggattcagttttgggatgggaggtaac
tctgcatctactggagggattggaacatccagttttggagaaactgctaaaaacccacca
gggtttaactttagtgctgaaacaaacaagacatctgtgttcagctttggtgctgggtct
ggtacagccactgcaacaactgctccagtatttggcgcaagtgcgaacaacacagttgcc
aaaacctctgcctcatcagcaccattttcattcacggctcagtcctccattcctgccact
ccttttgggtctgcccaggagtccacacatgcatttgctgccaacacgtctggatttggc
tctacacctaacatgtttgctggttccaacaacaccccgtcatttggagccagtggggct
gtccctccatctgggtttggtgcagctgctactgggttcaacactacatcagcaggaaac
accccagcctttggggcggccaccactactgctaatgccaatactggatctacaggaggc
ttcaattttgcaagtcaacaacaagggttcaattttagtgcacagcaaagtactgtaaac
aatggcgtgttccagtttggtgctaaaccaggtgaaggaactccagctgctgctcctcca
caggcccctgcaggattcaacttcaatgcttcttctactcctggctttaattttggtcag
agtacccaaccagctatgccagtgggtactggctcatttaacataggatcaaacaatgat
gcaagttcaggaagaaaaatcaagaaagctgtacgtaagatacgacgatga
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integrated database retrieval system
