Mizuhopecten yessoensis (Yesso scallop): 110442124
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Entry
110442124 CDS
T05079
Name
(RefSeq) regulator of nonsense transcripts 2-like isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03013
Nucleocytoplasmic transport
myi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110442124
03015 mRNA surveillance pathway
110442124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110442124
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110442124
mRNA cycle factors
P-body specific factors
110442124
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
110442124
NCBI-ProteinID:
XP_021341257
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MKCIQDYITESRERTENKKLLRGRNLAAADQRPDESFFTKLDSNLKKNTAFVKKLKNLTE
SQKESLTKEFNGLNLSKYVGEVAASITEAKLKMSDISCAVHISSIMFQRYYEFPAALLEN
IQKFLLGKKDDKISNPSKYRVDLRFFAELVSVGLFSKKEGLVVVGKQLEQLVNNDHEEHN
NLTILSSFCKHCGDDYMGLIPRKYRLLAEKYSLEIPGSQMLQPEKQKACRNLMKDYFQSL
CKHLLRVYKDLKNIERHNRRTLQTKGELSNERRESYESALVTYQKLYTNTAVFSDLLDDD
MPDLPEEDLLKDEESGFDVFDPLKNAEFQYVGDSTLFEDEDARAFYESLPDLRAFIPGIC
YKESEQATVKDETKDVETGLEEDIESLKVEDVEREMETEQQIAEVENKEAEEEAAKVKGQ
QEEAAVPAVDEDYSALHELDVEEDADTGNLMKVQFDAYLLSLPNCVNKDLLDKGSIEFCM
NFNMKSNRKKLVKALFTVHRTRYDLLPFYSRMVATLYPCMPDVANDLVQLLKGDFRWHVR
KKDQINIESKLKTVRFIGELVKFKLYPKSEALHCVKSLMFDFSHHNIEMACSLLDTCGRF
LYRSQDSHHRTKIYLDVMMRKKTALHLDGRYTTMIENAFYYSNPPDVPQSARKIRPPLHE
YIRKLLYKDLSKVTTEKVLRQMRKLNWDNREIGFYATKSLIAVWNVRYNSIHCAANLLAG
LAPYHEHVAIQVVDGVLEDIRIGMEINHPKYNQRRVSCAKFLGELYNYRMVESTVIFKTL
YSFITFGVSFDDSGESLLDPPQHLFRIRLTCVVLETCGQYFDKGSSKKKLDCFLIYFQRY
YWFKRQCSIWTEDRPFPIDVENLMQDTIEAIRPKSQVPQNYEEASKAAEDLENEYKQKLA
SVLSIIETDEGNSSEADEGVLTTIREIEEIDDFSNSLSNTEDDSEASGEDHSQSQRSYTG
SMSNRDQGEEGEGVETSENDDDDMLDSAGEDDEITLLTGGPKFVKCSEDDDFMTAFDKMM
IDNIQARNHESLKVPQLDIAVPMHLKDKNKKAACSNFLETQEEPKENKSIDFVLMTRRGN
KQQFTNLNVPISAEFAAKYKEREHAEKMEKERMKQVVLGIHERQEEEDYQEMIAALNRPM
PLVNANRDRRLRNYQHPKGAPDADLIFGSKKR
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgcatacaagactatatcacagaaagtagagaaaggacagaaaataaaaaacta
ctgcgaggacgaaatttggctgcagcagaccaaaggccagatgaaagtttttttactaag
cttgattcaaatttaaagaaaaacactgcttttgtaaagaaattgaaaaatttgactgaa
tcccaaaaagaaagtttgacaaaggagttcaacggccttaatttgagtaaatatgttggt
gaagtggccgcctccattacagaagcaaagctgaaaatgtcagatatttcctgtgcagtc
cacataagtagcatcatgttccagcgctattatgagtttcctgctgctctactggaaaac
atacagaagttccttctcggaaagaaggatgataagataagtaatcccagcaaataccgt
gtagacctgcgtttttttgcggagttagtgtctgttggattgttctccaagaaggagggt
ctggtcgtggtgggtaaacagttggagcagctggtcaacaatgaccatgaggaacacaac
aatctgaccatcctgtcgagtttctgtaaacactgtggcgatgattacatgggcctcatc
cccaggaagtacagattgcttgctgaaaagtattcacttgaaatacctggaagtcagatg
ctgcagcctgagaaacagaaggcctgtagaaatctaatgaaggactactttcagtctctg
tgtaaacaccttttacgagtatataaagacttaaaaaacattgagcgacataatcgcagg
actcttcagacaaagggagagctgagtaatgagagacgagaaagctatgaaagtgcactt
gttacatatcaaaagctttacaccaacactgctgtattttcagatctgctggacgatgac
atgccagacctgcccgaggaagatctgttaaaagatgaagaatctgggtttgatgtgttc
gaccctttaaagaatgcagagtttcagtacgttggtgacagtaccttgtttgaggacgaa
gatgcaagagcattctatgaatcacttcctgatctccgagcatttataccagggatatgc
tataaagagagtgaacaggccactgtcaaggacgaaaccaaagatgtggagactggtttg
gaggaagacatagagagcttgaaggtggaggatgtggagcgagaaatggaaacagaacag
cagatcgcagaggtggagaacaaggaggcagaggaagaggctgccaaggtcaaaggtcag
caggaggaggcggcagtgcctgcagtagatgaggactatagtgctcttcatgaacttgac
gttgaagaagatgctgacacaggcaacctgatgaaggtccagtttgatgcttacctccta
tctcttcctaactgtgtcaacaaggacctactggacaagggcagcatagagttttgtatg
aatttcaacatgaaatccaacaggaagaagctggttaaggcactattcactgttcacaga
accaggtatgatctgctgccattttactctcggatggtagcaacactgtacccttgtatg
cctgatgtggctaacgaccttgtccagcttctcaaaggagacttcagatggcatgttaga
aaaaaggaccagatcaacattgaatccaagttaaagactgtgcggtttataggagagctg
gtcaagttcaagttatatcccaaatccgaggcattgcattgtgtgaagtcactgatgttt
gatttctcccaccacaacattgagatggcctgttctctactggacacatgtggcagattt
ctctacagatctcaagattctcatcacaggacaaagatctatctggatgtcatgatgagg
aagaagacagccctccacctggacggtcggtacacaacgatgatagagaatgccttctac
tacagtaaccccccggatgttccccagagcgccagaaagatcaggccccctctccacgag
tacatcaggaaactcctctacaaggatctctccaaggtcaccacagaaaaggttctgagg
caaatgagaaaattgaactgggataatcgtgagataggattctatgccacaaagtccctt
atagcagtgtggaatgtacgctacaactcaatacactgtgctgccaatctcttagctggt
ctagcaccttatcatgaacatgtggccatacaggttgtggatggagtactggaggacatt
cggataggcatggagataaaccaccccaagtacaaccagcgccgtgtgagctgtgccaag
tttcttggagagctttataactacaggatggtcgagtctaccgtcatcttcaagactctc
tactcctttatcacttttggagtgtcgtttgatgacagtggcgagtcacttctggacccc
ccacagcaccttttccgtatccgactcacttgcgtggtgcttgagacatgtggacagtac
tttgacaagggttctagcaaaaagaagcttgattgcttcctcatctatttccagcggtat
tactggttcaaaaggcagtgtagtatttggaccgaggacaggccattccccattgatgtg
gagaacttgatgcaggacacaattgaagccatccgccccaagagtcaggtgcctcagaac
tacgaggaggctagtaaggctgctgaagacttggaaaatgaatacaaacagaaactagcg
tctgtactgtccatcattgaaacggatgaaggaaacagcagtgaagctgatgagggagtt
ctgaccaccatacgggagatcgaagaaattgatgacttcagtaacagtctgtccaacacg
gaggatgatagtgaggcaagcggggaagatcatagtcagagtcagcgaagttacacaggc
agtatgagcaatcgggatcagggggaggagggagaaggtgttgaaacgagtgagaacgat
gacgatgacatgttagactccgctggggaagatgatgagataaccctgttaactggagga
ccaaaatttgtcaagtgctcggaggatgatgacttcatgacagcatttgacaagatgatg
atagacaacattcaggcaagaaatcatgagtcactcaaagtgccccagctggatatagca
gtccctatgcatctgaaggataaaaacaaaaaggcagcatgttctaacttcttagaaacc
caggaagaaccgaaagagaacaagtccatagactttgtactgatgaccaggagaggcaac
aagcagcagttcaccaacctgaatgtacccatatctgctgagtttgctgccaagtacaag
gaaagggaacatgccgagaagatggagaaggagaggatgaaacaggtggtgctgggaatc
catgagcgacaggaggaggaggattaccaggaaatgatagcagcattaaacagaccgatg
ccattggtaaatgctaaccgggacaggaggttgaggaactaccagcatccaaagggagct
ccagatgctgacctcatctttggctcaaagaaacgttga
DBGET
integrated database retrieval system
