KEGG   Mizuhopecten yessoensis (Yesso scallop): 110442223
Entry
110442223         CDS       T05079                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:myi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110442223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:myi03021]
    110442223
   03036 Chromosome and associated proteins [BR:myi03036]
    110442223
Transcription machinery [BR:myi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     110442223
   Coactivators
    SAGA/TFTC/STAGA complex
     110442223
Chromosome and associated proteins [BR:myi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     110442223
    STAGA complex
     110442223
    TFTC complex
     110442223
    SAGA complex
     110442223
    SLIK complex
     110442223
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 TFIID_NTD2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WD40_Gbeta EIF3I WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_WDR19_1st WD_LRWD1 Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 LisH LisH_TPL Beta-prop_DCAF12 LisH_PAC1
Other DBs
NCBI-GeneID: 110442223
NCBI-ProteinID: XP_021341390
LinkDB
Position
Unknown
AA seq 678 aa
MAAPGSHNSVALPSSDVLPSRAEPMIPKSDISDKQTLLAVLQFLKKNNLKDTEELLKRES
GIKDDEVTPQSATASESDVSHALAAYKSSDDPSLYSDYYTDLKAFIDSCLDVHKVELAVI
LYPVFVHMYLELVYNGHESHAVEFFEKFHTDQEDYYQDDLRQLSTVVKQEHMQGNSLMEN
FKSSKFVIKMSRDSYIHLKRRLQEKKMKPLLNIIQEHLFVDVFDGMPRNKQQIQQSSGAV
LGESEREANRVKVYYGLLKEPDINIPLEEEEETGEGDDKPKKRKQKKDPLMMKKSKNDPN
APQNNRIPLPELKDSDKIEKITVFREGTKRVKINAANMPSICFYTLLNSFQGATCVEISE
DSSLLAAGFSNSTIRVFSLNATKLRTMKKPKDLDLIDKETDDVLERMMDDRTASDFKVLH
GHSGPVYATNFSRDRKFLISASEDGTIRLWSLLTWTNLVCYKGHIYPVWDVKFSPHGHYF
VSCGHDKTARIWTTDHSQPVRIFAGHLSDVDCALFHPNSNYVATGSSDRVVRMWDNLTGN
CVRILTGHKGAVQALCFSPDGRFLASSGVDRCVLLWDISSGSLLANMKGHTDTVYCLAFS
REGASLASGGLDNYVRLWDIHRVLQEVDMEADLSIPSSFTVNENPNLLFGSFPTKSTPVL
AVHFTRRNLLLASGPLQT
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggcggcgcccggcagccacaattcggttgccctgccgtcatcggacgtcttgccaagc
cgtgcagaaccgatgattccaaaatctgatatatcagacaaacaaacgctgctagctgtg
ctgcagtttttgaagaaaaataatctaaaggacactgaagaattactaaagcgtgagtcg
gggataaaagatgatgaagtcacgccgcagtctgctacagcgagtgagagtgatgtgtct
catgctctggctgcttacaaaagttcagacgatcccagtctctatagcgactactacacc
gacctcaaggctttcattgatagctgtctggatgtccacaaggtggagctggctgtgatc
ttgtacccagtatttgtccacatgtacctagagctcgtttacaatggacacgaaagtcat
gcggtggagttttttgagaagttccatactgaccaagaagattactaccaggatgacctc
agacaactgtccactgtggtcaagcaggaacacatgcagggaaacagtctgatggaaaac
ttcaaatcgagcaagtttgtgataaagatgtcgcgggactcctacatccatcttaagcgg
cgcctacaggagaagaagatgaaacctttactgaacattatacaggaacatctgttcgtg
gatgtttttgacggtatgccgagaaataaacagcagatacagcagtcgagtggagccgtc
ctgggggagtcggagcgagaagctaacagagtgaaggtgtactacggcctactgaaggag
ccggacatcaacatcccactggaggaggaggaggaaaccggggagggggacgataaacct
aagaaaaggaagcagaagaaagatcctcttatgatgaagaagtccaaaaatgatccgaat
gcccctcagaataacagaataccgctgcctgaacttaaagacagtgacaagatagagaag
attacggtgtttcgggaggggacaaaaagagtgaaaatcaacgcagctaacatgccgtca
atctgcttctacacgctactcaattccttccagggggcgacgtgtgtggagatcagtgaa
gactcgagtctgcttgccgcggggttctccaattccaccatcagggtgttcagtctcaat
gcaacaaagctacgcaccatgaagaagccaaaagatcttgacctcatcgacaaagaaaca
gatgacgtgttagagaggatgatggatgatcgtacggccagtgacttcaaggtcttacat
gggcacagtggtccagtgtatgccacgaacttcagccgcgatcgcaagttcctgatatct
gcctcggaggacggtactattcgtctttggagtttactgacctggaccaacttggtttgt
tacaaaggacatatctacccagtgtgggacgttaaatttagtccccatgggcattatttt
gtgtcctgtggccacgataaaacagccagaatctggacaactgatcactctcaaccggtc
agaatatttgctggtcatctctccgatgttgattgtgcattattccaccccaatagtaac
tacgtagcgacagggtcaagtgaccgagtggtcagaatgtgggacaacttgaccggcaat
tgtgtccgaattctcactggacataagggagcagtacaggcgctgtgtttctcaccagac
ggaagatttctcgcatcctcaggtgtggatcgctgcgtacttctgtgggacatttccagt
ggaagtctattggccaacatgaagggacacacggacacagtgtactgtctggcttttagt
cgtgagggtgcatctttggcgtcaggtggtctggataactatgtcagactatgggacatt
caccgagtactacaggaggtagacatggaggctgatcttagtatcccgagctccttcaca
gtgaatgagaaccctaatctcctttttgggtcgtttcctaccaagtccactccggtcctc
gcagtccatttcacccgcaggaacttactattggctagcggaccactacagacttga

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