Mizuhopecten yessoensis (Yesso scallop): 110442252
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Entry
110442252 CDS
T05079
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
myi03009
]
110442252
Ribosome biogenesis [BR:
myi03009
]
Eukaryotic type
90S particles
Other 90S particles
110442252
Pre-60S particles
Other pre-60S particles
110442252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
CLASP_N
TPR_CAND1
FemAB
Motif
Other DBs
NCBI-GeneID:
110442252
NCBI-ProteinID:
XP_021341432
LinkDB
All DBs
Position
Unknown
AA seq
1305 aa
AA seq
DB search
MGQKNRNARVVPRSKNVGRKKWKKGHSSSSNPETKIFREAAKSRFFNKQSGPSSLTEGAL
AKHNEGQVDGDAILSDDESDRQTAGGKTFNTWATNWTDCTNVTFNKVHRYWASNSALHKE
ILAILAAVTEVIKSQGGTETETEYFAALMTALETTEGLDSLTAITYLLNIVLKRVPPTVL
RSRFSEVARQLLDVMATHVDGESTSLLKSLIMSLATLLRVQEPAVWSNSSTHRIYSGLLT
FTTHKKPKVRKAAHQGVCIILRGSLFMTQGDPPPHHPAASITAKFCIQKVEECGGSGDAT
DTLHTLSLLKEVVGLLPQHSTKSVCETILRLMTLSNPMVTASSMQTLHGLFSSNPKISNF
SSELNGQIITALYDYQPSENDVQPMQAWLVVMEKAHINLVKLDEKLGISHLPRLFSTGMA
NLLSDKEEVTATAAKTMKSLLKTCLGTVSDGLVGVVRSAPDGSPTPIHKLVRAVDTGLSY
QFHASWGHVLNIFSIFFEVFGKQCPQLFKKSLPSIASLRDSPRFAYKAELDHTFGCAVKY
MGPRQVLQVVPLNITGENDDYSFPTSWMIPVIRDNLYKTELGFFTSYFLPLAAKFRQRAL
EGNDGDSVVVKKSYEALHLQIWSMLPGFCTKPTDLTQSFKTIAKVLGTAISDWPGLRMEV
MSSLRKLINQSKEDESSKKAVSQFAKNFLPILFNLFTADPEKDKDPTRLAVLETVKCYLQ
VADSQLVLSFCDKCMGKLEEENITSFRRQALLDLVIGMVSYIDNTRLRLMLDFCKTNLQN
TDRSLQKKCYRYMEEVCACQCDTTRQFIQDNLAEVQEVLLSSLSTSSPSSKAPRLRCLIN
IFQQLGDAEQDFLLAVVPEAILCTKELAERARTAAYGLLVEMGKAQIRWADNSDATHQAA
VHTYFRTLMAGLAGSPQMISATLLALTRVLYEFKDHIDGLMLESIIDNACLLLTSRAREV
VKSTLSFIKVLLSAYQDTTLAPHLKKLMSNLVSMKEDARHHFRFKSKEIYAKLIRKFGYE
TICGMAPASIHKILINIRKTEERAKKARKAGKAKEDSDSDEEGHLRSQPETVEELLQDTD
SEMEEDTDNKKKKKGEKKSSKGDKGAWLQEGNEDEIMDFLDTTASKKVVATKPLAKKQVT
KSKDAGFKKAADGRLIITEGSEDGGAGGQISDEDDLDELLEAMEKGSGATKRAKKRKIED
IASEAGGSVVSSRYKAGGHGIHRPMSGDAKTKTNKPIGGEYKSKKAGGDMKKKDKPEPYA
YVPLDFQSLNKRKKAKMQGRFNNLVKGARKGAMKGSKGKGSKGKK
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgggacagaaaaatcgtaatgcaagagtcgttcctcgttctaagaatgtcggaaggaag
aaatggaagaaaggccatagtagcagtagtaatccagagacgaaaatattcagagaggct
gcgaaaagtagatttttcaacaaacaatcaggcccaagctcgttgacagaaggtgctctt
gctaaacataatgagggtcaggtggatggtgatgccattctgtcagacgatgaatcagac
agacagacagcgggaggaaagacctttaacacgtgggcaacaaactggacagattgtacc
aatgtcacattcaacaaagtccatcgatattgggcctcaaactcagccctacacaaagag
atattggcaatcctggctgctgtaacagaagtcatcaagtcccaaggcggaacagaaaca
gaaaccgaatactttgctgccctgatgacagcattagagaccacagaaggacttgactct
ctcacagcaataacttacctactcaacattgttctgaaaagagtaccaccaacagtactg
cgcagtagattttcagaagttgctaggcaactgttggatgtcatggcaacccatgttgat
ggagaatcaacttcactcctaaaatcgctgattatgtcactagcaacgctgctgcgagtt
caggagccagctgtatggtcaaactcgtccactcacaggatttactccggcctcctcacc
ttcaccactcacaaaaaacccaaggtccggaaggctgcccaccagggtgtgtgtataata
ctgaggggtagcctgtttatgacccagggagatcctccacctcatcacccagcagcctcc
atcacggccaaattctgcatccagaaagttgaggagtgtggaggttctggagatgcgaca
gacactctacacaccctgtccttactgaaggaggtggtggggctccttccccagcatagt
accaagtctgtgtgtgaaactatactgagactgatgaccctcagtaacccgatggtgact
gcgagtagtatgcagacgctgcacggtttattttcttcaaaccccaaaatatccaacttt
tcctccgaactgaatggacagataattacagctctatatgactaccagccgtcggagaac
gacgtacaacccatgcaggcgtggcttgttgtcatggagaaggcacacatcaacctcgtc
aaacttgatgagaagcttggcatcagtcacttgccccgtctcttctccacgggaatggct
aatttattgtctgataaagaggaagtgacagccactgcagccaaaaccatgaagagtctg
ctaaagacgtgtctgggtacggtgtctgacggactagtgggtgtggtcaggtccgcccct
gacgggtcccccactcctatacataaactggtgcgtgcggtggacactggcctgagctac
cagttccatgcttcgtggggacatgtcctcaatatcttctccatattctttgaggttttt
ggaaagcagtgcccacagctatttaaaaaaagtttgccctccatagccagcctgcgagac
agtccacggtttgcctacaaggcggagcttgaccatacatttgggtgtgctgttaaatac
atgggcccccgacaggtactacaggtggtgcctctcaacatcacaggcgaaaatgatgac
tacagttttccaaccagctggatgatcccagtgatccgagataatctctataaaacagag
ctaggctttttcacctcctacttcctaccactggctgcaaagtttaggcagagagctctg
gagggcaatgatggagacagtgttgtggtgaagaagtcgtacgaggctctccacctacag
atctggtccatgttaccagggttctgtaccaaacctacagacctcacacagtcttttaaa
acaatcgccaaggtcctgggtacagccatcagtgattggccaggtcttcgtatggaggtg
atgtcatcgctaaggaaacttatcaaccagagtaaagaagatgagtccagtaaaaaggca
gtgtcacaatttgcaaagaatttccttcctatcttatttaacctgtttactgctgaccct
gagaaagataaagatcctacacgactggcagtgctggagacagtcaaatgttacctacag
gtcgctgattctcagcttgtgctttctttctgtgataagtgtatgggcaagcttgaagaa
gaaaatatcacttcatttagaagacaagccttactggatctggtcattggcatggtctcc
tacatagacaacacaagattacggttaatgttggacttctgtaaaactaatctacagaac
acagatcgatccctccagaagaaatgttaccgttacatggaagaggtttgtgcatgtcag
tgcgacacaacccgacagtttatccaggacaacttagccgaggtccaggaggtgttgctg
tcctctctgtccacatctagtccttcctccaaggcgcctcgactacgttgccttatcaac
atattccaacaattaggtgacgctgagcaagacttcctcctggctgtcgtacctgaggca
attctgtgtactaaagagctagcagagcgagcgagaacagcagcgtacggtctattggtg
gagatggggaaggctcagatcagatgggcagataactctgatgcaactcatcaagccgct
gtacatacctacttccggaccttgatggctggattagccggatctccccagatgatcagt
gccacactgctcgcccttaccagagttctgtacgagttcaaagaccatattgacgggtta
atgctggagtctattatagacaatgcttgtctactgttgacgtctcgggctcgtgaggtt
gtcaagtcaacactcagctttatcaaggttctcctgtcggcctaccaggacactacacta
gcaccacacctgaaaaaactgatgtctaacttggtcagtatgaaggaagatgccaggcat
catttcaggtttaaatccaaggaaatctacgccaaactcatcagaaagtttgggtatgag
acaatctgtggtatggcaccagcaagtatccataaaatccttatcaacatcaggaagacc
gaggaaagagctaaaaaggccaggaaggctggcaaggctaaagaagattctgatagtgac
gaggagggccacctcaggtcacagccagaaactgttgaggagttgttacaggacactgac
tcagagatggaagaggatactgacaataagaagaaaaagaagggagaaaagaagtcgtcc
aagggagataagggggcgtggcttcaagaaggaaatgaggatgagatcatggacttcttg
gatactactgcttctaagaaagtcgtggccaccaaaccacttgctaagaagcaagttacg
aagtccaaagatgcaggctttaagaaggcagcagatggtcggctcattattacagagggg
agtgaagacggaggagctggaggtcaaatctctgatgaagatgaccttgacgagctgttg
gaggccatggagaaaggttcaggtgccacaaagcgtgccaagaagaggaagatagaagat
attgcatcagaggctggaggcagtgtagtttcctctcgttataaagctggaggtcatggt
atccatcgacctatgtcaggtgatgcaaagacgaagacaaacaaacctataggaggagaa
tacaaatcaaagaaagcaggaggagatatgaagaaaaaggataaaccagaaccttatgct
tatgtaccgcttgacttccagtcactcaacaaacggaaaaaggctaagatgcaaggaaga
ttcaataatcttgtgaaaggtgctcggaaaggtgcaatgaaggggtcaaagggcaaaggg
tcaaaggggaaaaaataa
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