Mizuhopecten yessoensis (Yesso scallop): 110442399
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Entry
110442399 CDS
T05079
Name
(RefSeq) SCO-spondin-like
KO
K24434
SCO-spondin
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
myi04990
]
110442399
Domain-containing proteins not elsewhere classified [BR:
myi04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
110442399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWD
C8
Ldl_recept_a
TIL
VWF
JAG1-like_EGF2
EGF_DL_JAG
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
110442399
NCBI-ProteinID:
XP_021341668
LinkDB
All DBs
Position
Unknown
AA seq
2758 aa
AA seq
DB search
MAKNFHFFPGFVTWILFLGTTGLWNAAQGYTYGDENVCMIDVTRTNQTEAPCKDYLDLVL
TDNPFTLMMKESFPTKEEYDDRVNILMDKDPKYTNKMCIFSRSYSTKAPGCCAGWTGPDC
LTAICEPPCSNNGQCTAPHVCTCDSGYAGTFCDEIELDVDAVKQYCYASPYCHGEKADGF
ENKLSYEDDCCKGGGAGWGATGGKCEDCAVVYGGEGVVDQVKDVGFRTCLNCGSSYFRTF
DGREYQFQGRCKYTLAADSQGKWQVDIEPVDCDIFETCRKEVTIFVASGEKLSVKNGEVY
VDGQLVTVSTDAKSTAGNTYTILKKGDWIMITTSNDNLRLKVDYFSTCYLTLDDSIHGTT
SGLCGNFNEDFKDDLRTKSGELTTNPSNFGNSWRTDSSCSPTGPIVDYCHDLSMKSEAME
ACGILRTGLFRDCRAKISYLSWYQMCVNEYCKADTDQKEHVRCYHVGAFAHECAQVDIIV
SWRSRDVCAPSCPNGLVYNECSSPCPRSCSNVFADLSESCSTKGPCLSGCECPGGTILQD
GKCVAPDQCKCHYNKEYYAPGDVIKRDCNECECDKGVWICTEERCSSTARIIGLSHVKTF
DGQEYDLDPNVAKYTFVERTDDAEVDTRSDLVVDMSFDNCPVIDSSYDRNCLIAVHIKYK
STHITLRGSEVLIDGETIHGNSFYYFHSQDVYIKQATNLYIMVKGFGFQLLYDRSRAVYL
TLDRFYMHKVRGLFGTYNDNRKDDYMARNDYPSTEPHLFAHGYSDSVDSPKRYSRSYQTA
AVAEEATKLCELLSSHQVFAVCLGRIEVKFYISKCYDDYISSTIEGRDKVFCDITAAMAM
ECANIGTNYISDWTEAAEWKTRCMAYSQCNNGGSYTECASVCNGRCRDTQMSDMTCQEKC
VPGCQCPSGQLYNGDGQGSCVTLDQCSCFNRYDGSYVEANTVTRQGCTNCTCANATWSCD
NEHCDEDIICPKTQIYRLSITGCEPTCDTIDRSVACSSAITYDGCGCPENTYKTHNGRCV
KKDLCPCTRGGEYFEPNSLFEDSCKTYRCVNRHWLKISETDCPGVCWASGDPHYQTFDEV
HYSFQGKCEYTLVRESSANHEFEISTTNVECGTTGISCTKSVTIRKGQTSIQLVRGHPLT
INGVANTDTLIKLTGVNITVEFPWTSVFLDEFSVLWDNGTRVFIFLDSKWKGRVEGLCGN
FDGIDNNDFQSQSGITDPTDINTFANSWRKATYCPEVESDRNELIACSGGQSIRKAWAEE
SCRIIKEGDLFHSCRDKVSNFEDYYDDCLFDACSCDKGGDCECLCTAIANFAEECNRIGV
FVKWRTPRFCPIMCENGLRYTPCMSPCRQTCRNIGNEPEPYCNSTQCVEGCFCPEGYIQH
DDGCIPADECPCYENGIEHPSKSVITHECMKCTCVRGKFECEGYNCITPCKEEQFTCDDG
QCIGEVYTCDGHMDCRDGSDEAKCNCSAAQFTCQNGACIDMKDRCDGFKDCADSSDEWYC
KHECESTSYEIFQCDNGDCLPASFRCDGHYDCRTDISDEANCTTPGKCDLLHHFRCIETG
KCIPKTMECDGHDDCGDGNDEDDCTTVAPTTTTTTIMTTTTATTTTTLPTTTPECEYVNG
FEGGFVKQDDVRVLSDGETFGVARDIFPDKGLIIPWTDIMIIITLKPSVTLGYLEFKNPE
GSNIDQVQVNVDGEQVATASVNKPIPLHGVLSDNVVILIKSRRDISIGVTISIELRGCFY
VASTTTEPTTTSATSISTSTASTSTPSTTMTTEFKPCDISEGLGSRMKIRDSDIEITNGY
GNEDVADLRPDGAGLLFQKNSYLKINFDATPVRLALMNVTTVSQVRIKVTIITASGDLEE
MESRTPSIVRFNGQTFVKQLQVFFLDEGTIKMELFGCFHYESTTASTSTTLSTSTTTEGT
TERTSSTSTESTTSSISTTQTTTKITSPTEGTTERTTSTERTTASTTPSTTTLTTMATTS
PICEMIEIDGDDTEMYTLTPRLYGKNMQDAMRKDSGAQTTLDFPTGNTPFLIDFKSTITV
LKLTLTVEKEANDLVVVADFDDSTEKANEVSDTGKVIVTFNLQGGLPVTRIGIKFIGVGS
VQLSDIFLEVCKGVVSSTVSTTTALVTSQTTPELTSPPCLFFCDSNHKCLKEDNICDGTL
DCYDGSDETNCSPGETTTTTWKPTSPTLASSTLSTSTTTLPTTTTPEKTTSTTTLTTSST
TTSTTTSTTTLPTTTTMPTSTESSTPMETTSTTTVTTSKTTTPTTTHSTTTECDVQMISK
DNTADVVSETTNGKGNGLDEPFIANSGVVQPTISYTIKAINDDVKFVRVALTVTNVQTVK
VYVVDTNNNVVAPINPKQVSVTGPYPKTVEIKLIGTEGVKLKVVLVPTSYGQPKLENVEI
DACYTEATTTAVPTTTTVPTTTSTTTSTTTLPTTTTMPTSTESSTPMETTSTTTVTTSKT
TTPTTTHSTTTECDVQMISKDNTADVVSETTNGKGNGLDEPFIPNSGAVQPTISYTIKAN
NDDVKFVRVALTVTNVQTVKVYVVDTNNNVVAPINPKQVSVTGPYPKTVEIKLIGTEGVK
LKVVLVPTSYGQPKLENVEIDACYTEATTTAVPTTTTVPTTTSTTTSTTTLPTTTTMPTS
TESSTPMETTSTTTVTTSKTTTPTTTHSTTTECDVQMISKDNTADVVSETTNGKGNGLDE
PFIPNSGAVQPTISYTIKANNDDVKFVRVALTVTNVQTVKVYVVDTNNNVVAPINPKQ
NT seq
8274 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaacttccatttcttccccgggtttgtgacatggatactctttctaggaaca
acgggcctatggaatgccgcgcagggttacacctacggcgatgaaaacgtctgtatgatc
gacgtgacaagaacaaatcaaacagaagctccatgcaaagactatctggacctagtgctc
acagataacccattcacgctgatgatgaaagaaagcttcccaaccaaagaggagtatgac
gatcgagttaatatattaatggacaaagatccaaagtataccaacaaaatgtgtatattt
tcaagatcgtactcaactaaagcgcctggatgctgcgccggttggacgggaccagattgt
ctaacagcaatttgtgagcctccctgttccaataacggccagtgtactgcaccacacgtg
tgtacatgtgattcaggttacgctgggacattctgtgatgaaatcgaactagatgttgat
gcggtcaaacagtactgttacgctagtccgtactgccatggtgagaaggcagatgggttt
gagaataaactcagctacgaggacgactgttgtaagggtggcggtgctggctggggagca
actggaggcaaatgtgaagactgtgctgttgtttatggcggagagggagttgtggatcaa
gtaaaagatgttggcttcagaacttgtttgaactgtgggagcagctacttcagaacattc
gatggtcgcgaatatcagtttcaaggaaggtgcaaatatactcttgctgctgacagtcaa
ggcaaatggcaagtggatattgaacctgtcgactgcgatatcttcgaaacctgtagaaaa
gaagttacaatttttgtagcgtctggtgaaaaattatcagtgaagaatggagaagtttac
gtagacggtcaacttgttacagtctctactgatgccaaaagcactgcgggaaatacatac
actattctgaagaaaggcgactggattatgatcacaacatcaaacgacaacctgagactg
aaggtagactacttttccacatgctatctgacacttgacgacagtatccacggaacaaca
agtgggctttgtggaaatttcaacgaagactttaaagatgatttaagaacaaaatccggt
gagctaacaacaaatccatctaattttggtaattcctggagaacagatagctcgtgttca
ccaacgggaccaatcgtcgactattgccacgacctatccatgaaatcagaagcaatggaa
gcctgtggtatactccgaactggactctttagagattgcagggctaagattagctatttg
agttggtaccagatgtgtgtaaatgagtactgtaaagcagatacagatcaaaaggaacac
gtgcgatgctatcatgtaggtgcattcgcccatgaatgtgcccaggtagacataatcgtc
tcatggagaagcagggacgtatgcgctccctcatgtcccaacggtcttgtgtacaacgaa
tgcagctcgccttgtccacggtcatgctcgaacgtatttgctgatttgtcagaaagttgt
tcaaccaaaggaccatgtctttctggttgcgaatgtcccggaggcactatcttacaggat
ggcaaatgtgtggcaccagaccaatgcaaatgtcactacaacaaggagtactatgcaccg
ggggacgttataaaaagggattgcaatgaatgcgaatgtgacaaaggtgtatggatatgt
acggaggagagatgttccagtacagctaggataataggattgtcgcatgtcaaaacattt
gatggacaagaatacgacttggatccaaacgttgcaaaatatacttttgttgagcgcact
gacgacgccgaagttgacacccgatctgaccttgtggtagacatgtcctttgacaactgc
cctgttatagattcgtcttacgaccgaaactgtctcatagccgttcacatcaaatacaaa
agcacgcatatcacactgagagggagtgaagtattaatcgacggtgaaacaattcatgga
aatagtttttattattttcattctcaagatgtttacatcaaacaggccacgaacttatac
attatggtgaaaggatttggattccagcttctgtatgaccgatcacgagcggtatattta
acacttgatcggttttatatgcataaggtccgagggttatttggtacctacaacgataac
aggaaagatgattatatggcaaggaatgactacccttcgactgagcctcatctgtttgcg
catggctacagtgacagtgttgactctccaaaacgatacagtcgatcgtatcagactgct
gcagtggcagaggaggcgactaaactctgtgaactcctaagcagccatcaggtgtttgct
gtgtgtttgggacgaatcgaggtgaagttttatatatcaaagtgttatgatgactacatt
tctagtaccatcgaaggccgtgacaaagtgttttgtgacataacagccgccatggcaatg
gaatgtgcaaatattggcaccaattacatttcagactggacagaggccgcggaatggaaa
acgagatgcatggcatattctcagtgtaacaatggaggatcgtatacagaatgcgcgtct
gtttgtaatgggcggtgtcgtgacacacagatgtcagacatgacctgtcaggaaaaatgt
gttcctggatgtcaatgtccaagtggtcaactgtacaatggcgacggacaaggatcttgt
gttacccttgatcagtgttcatgcttcaatcgttatgatggcagctatgttgaggcaaac
acggttacacggcagggatgtacaaattgtacgtgtgcaaacgcaacatggtcttgtgac
aacgaacactgcgacgaagacatcatctgtccgaaaacccagatatataggttgtcaatc
acaggttgtgaaccaacatgtgacactattgaccggtccgtggcatgctcctctgccatc
acgtacgacggatgcggatgtcctgaaaatacatacaaaacgcataatgggcgatgcgtg
aagaaagacctttgtccgtgcacacggggaggagagtattttgaacccaattcactattt
gaggattcttgcaaaacatatcgctgtgtgaacaggcattggttaaagataagcgagacg
gactgtccaggtgtctgctgggcttcaggggatcctcattaccaaacatttgacgaagtt
cactactccttccaaggaaaatgcgagtacacacttgtacgggaaagcagtgccaatcac
gaatttgaaatcagtaccactaatgtggaatgtggaactactggtatttcatgcacaaaa
tctgttaccatcagaaagggacagacatcaatccaactggtgcggggacatccacttaca
atcaatggtgttgctaataccgatactcttatcaagctcacaggcgtcaacatcactgta
gagtttccatggacatccgtgtttcttgatgaattctccgtactttgggataatggaaca
cgagtgttcatattccttgattcgaaatggaagggacgtgtagagggtctgtgtggtaac
ttcgatggaattgataacaacgattttcagtcacagagtggaattacagatccaactgat
attaatacttttgcaaattcttggaggaaagctacatactgccctgaagttgaaagtgac
cgtaacgagctgatagcatgttcgggaggtcagtccatccgaaaggcttgggcagaagaa
agttgtagaattataaaagaaggagatctgttccattcctgcagggataaagttagcaat
tttgaagactattatgacgattgcttgtttgacgcatgcagttgtgataaaggaggagat
tgtgaatgcttgtgtacagcaattgctaattttgcggaagaatgtaataggattggtgtt
tttgtgaaatggagaacaccccgattctgcccaataatgtgtgaaaacggattgcgatat
actccatgcatgtcgccctgtcgtcagacttgtagaaacattggcaacgagccagaacct
tattgtaacagcacacagtgtgtagaaggatgtttctgtccagaaggctacatacaacat
gacgatggttgtattccggctgatgaatgtccgtgttacgaaaatggtatcgaacatcca
agcaaatctgttataacccacgaatgcatgaaatgtacatgtgtccggggcaaatttgaa
tgtgaaggctacaactgcataacaccttgtaaagaagagcaatttacttgtgacgatgga
cagtgtattggggaggtttacacatgtgatggacatatggactgcagagacggatcagat
gaagcgaaatgcaactgttctgcggcacagtttacatgtcagaatggtgcatgcatcgac
atgaaggacagatgtgatggctttaaagattgtgctgattcgtcggatgaatggtattgc
aaacatgaatgtgagtctacatcttatgaaatatttcaatgtgacaatggagattgcttg
cctgcatccttccggtgtgatggtcactatgattgtcgaacggatatatccgatgaagcg
aattgcacaacgccgggaaaatgtgacctattgcatcattttagatgtattgaaactgga
aagtgtatacctaaaaccatggaatgtgatggtcacgacgactgtggagatggcaatgat
gaagatgactgtacaacagtagcacccacaacaaccacaacaactatcatgacaacaaca
acagcaacaactacaactacgctaccgacaactacccctgaatgtgaatacgtgaacgga
tttgaaggaggatttgttaaacaagacgatgtgcgtgttctgtcagacggggagacgttt
ggagtggctagagatatatttccagataagggactgataattccctggacagatataatg
ataataataacattaaaaccctccgtaacactaggctacctagagttcaaaaatccagaa
ggaagtaacatagaccaagtacaagtaaatgtcgatggagaacaagttgcaacggcttcg
gttaacaaaccaataccattgcacggtgtcctgagtgataatgtcgtcatattgattaag
agccgacgcgacatctccattggtgtaacaattagtattgaacttcgaggatgcttttac
gtcgcatcgacaaccacagagccgacaacaacatcagctaccagtatatctacgtcaaca
gcttcgacctccaccccatcaaccacaatgaccacagaatttaaaccatgtgatatatca
gaagggcttggttcgcggatgaagatccgtgattctgatattgagataacaaatggctac
ggaaatgaagatgttgctgatctaagaccagacggtgctggattattatttcagaaaaac
tcttatctaaaaattaactttgatgcaacgccggtgagactagcattgatgaacgtgact
acagtttcgcaagtcagaattaaagtgaccatcattaccgcatctggggatcttgaagaa
atggaatcccgaacaccatccatcgtaagatttaatggccagactttcgtcaaacaactt
caagtgttctttttagatgaaggaaccattaaaatggaattattcggatgtttccattac
gaatcaacaactgcgtctacatcaacaacactctctacatcaactacaacagaaggtaca
acagaaaggacttcatcaacatcaacagaatcgacaacttcatcaatatctacaacacaa
acgacgacaaaaataacaagtccaacagaaggtacaacagaaaggacaacatcaacagaa
cggacaactgcatcaacaactccatcaacgacaactttaacaacgatggctactacaagt
cctatttgcgagatgatcgaaattgatggcgatgacaccgaaatgtacactttaacgcca
aggctttacggaaagaacatgcaagatgcgatgaggaaagattctggtgctcagacaact
ctggatttccccactgggaacacaccgtttttaattgattttaaatcaacgattacagtt
ttgaaacttacattaactgtcgaaaaagaagccaatgaccttgttgttgtcgctgatttt
gacgacagtacagaaaaggcaaatgaagtttcagacaccggcaaggttatagttacgttc
aacttacagggcggactacctgttacacgaatcggcatcaagttcattggtgttgggtct
gtgcagctcagtgatatttttctagaagtatgcaaaggtgttgtttcaagtacggtatcc
actacaactgcccttgtaacgtcacagacaactccagagcttacttcgcctccatgccta
ttcttctgcgatagcaaccataaatgcctcaaagaagataatatatgtgatggaactctg
gattgttatgacgggagcgatgaaaccaattgttctccaggtgaaacaacaacaacgaca
tggaaaccaacgtctccaacattggcatcatcaacattatctacttcgacaacaacttta
ccaacaacaacaactcccgagaaaacgacatcaactactaccttaacaacaagctccact
accacgtccactaccacgtcgacaacgaccttgccaacgacgaccaccatgcccacgtct
acagaatcatcgactccaatggaaacgacatctacaactacggttacaactagtaaaaca
acaacacctacgactacgcacagcacaacaacagaatgtgacgtccaaatgatttcaaag
gataacacagccgatgttgtatccgagactactaatggaaaagggaacggattggacgag
ccatttattgcaaactctggcgttgtacagccaacaatcagctatacgatcaaggctatt
aatgacgatgttaaattcgtcagagttgctctcacagtgacgaatgtccagactgtcaaa
gtttatgtagttgacacaaacaacaatgttgttgcacctatcaatccaaaacaggtgtca
gttaccggaccatatccaaagactgttgaaatcaagctgattggtacggaaggtgtgaag
ttgaaggtagtccttgtaccaacttcatacggtcaaccaaaacttgaaaacgtggagatt
gatgcttgttacactgaagcaacaacgaccgcagtgcctacaacaacaactgttccgact
accacgtccactaccacgtcgacaacgaccttgccaacaacgaccaccatgcccacgtct
acagaatcatcgactccaatggaaacgacatctacaactacggttacaactagtaaaaca
acaacacctacgactacgcacagcacaacaacagaatgtgacgtccaaatgatttcaaag
gataacacagccgatgttgtatccgagactactaatggaaaagggaatggattagacgag
ccatttattccaaactctggcgctgtacagccaacaatcagctatacgatcaaggctaat
aatgacgatgttaaattcgtcagagttgctctcacagtgacgaatgtccagactgtcaaa
gtttatgtagttgacacaaacaacaatgttgttgcacctatcaatccaaaacaggtgtca
gttaccggaccatatccaaagactgttgaaatcaagctgattggtacggaaggtgtgaag
ttgaaggtagtccttgtaccaacttcatacggtcaaccaaaacttgaaaacgtggagatt
gatgcttgttacactgaagcaacaacgaccgcagtgcctacaacaacaactgttccgact
accacgtccactaccacgtcgacaacgaccttgccaacaacgaccaccatgcccacgtct
acagaatcatcgactccaatggaaacgacatctacaactacggttacaactagtaaaaca
acaacacctacgactacgcacagcacaacaacagaatgtgacgtccaaatgatttcaaag
gataacacagccgatgttgtatccgagactactaatggaaaagggaatggattagacgag
ccatttattccaaactctggcgctgtacagccaacaatcagctatacgatcaaggctaat
aatgacgatgttaaattcgtcagagttgctctcacagtgacgaatgtccagactgtcaaa
gtttatgtagttgacacaaacaacaacgttgttgcacctattaatccaaaacag
DBGET
integrated database retrieval system