Mizuhopecten yessoensis (Yesso scallop): 110442717
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Entry
110442717 CDS
T05079
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
myi03036
]
110442717
Enzymes [BR:
myi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
110442717
Chromosome and associated proteins [BR:
myi03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110442717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
110442717
NCBI-ProteinID:
XP_021342130
LinkDB
All DBs
Position
Unknown
AA seq
2030 aa
AA seq
DB search
MSDLVDIEITKVKSPALFYAKVVRDLESSEGLSFQQLEKSINDFFNSESLYLPNYIPNEG
DICIGRRVSDRCWCRVQVKGVLSRRSGPEGRCFFLDYGISDFIPLKWFRKASSDYLQVPY
QVKKFCLYGVKALTLAVETEDLTFKEVVSEFWDTSAVTLMNQVVKESHSTKARFRCVDRD
DVHHVDIYFISPKQTIWLNEEFVTLKYAAWCNPEQTLADSGEAVIQKLLKHTKTLESSLY
GDGGNRTKKPLSGSCSDTESGRRTLFSPVKHSLNSTVPVVERMKRRGIHHSVADQITNSI
SNLSSQNVSGTLAEGDHVKKSQKNDLKRKPFTITEIRERKKLCEPSVCSDSEIVYNSSPF
HQKSTNSIQALTSVGILTSSGTPVSPICSSALDKSIERLSMSPASSNSSLTSPIVSKNFM
LGRLISVISPKKKESTATNDLGPTKTSIKTNTSKLLHSELSLPLTPARLPKSAMRSSASE
SDPDNSRVQVSRQISTSSSKSSGSASSEEDKLVSDIKKSILKKSSSSVLLNDKPSVRFRD
SEALAETHAKKTQMMGRLTGKNAGQRLLDKLCVGVGSHSMGKKPGEEPNLNDDGVLVHSE
DPLKPIYNIHDTPLDPIIREGLDNYGIVAPKFVQCYTWPALLRGRNVVGISPSGSGKTFA
YLAPLLTDLLKPSNYKDIPTGNGPYAIILVPFWKSAQMVYDVTKILLGNSRSFRVLVAYG
GGNEENQVVPLINGCELLITTPRSLSRLLQQKYTHLERLCHVVIDDAEIVLEEFREEIQD
FMISYSRVVEEHVERSAPREVLVFSSRWCNMVNSFIDAFIPDPTLIITSRFEAAIYGRVK
QIPLLWRTDQLVSQFLELVNSLAQENSKMIIFCSNVNTTLHIHKLLKSRSLYSLLTHDKM
DTLMLEQIGGEWEGPSDKGKILICTDESVEELKIVDATAIVHYELPSSKTKFGNRLSTMS
KYYHNSSSKEKINIDPTSYILITEDSGRQVETILQLLKRTKSKIPRNLYSMVMGLNQEKN
CDGDKDLCVALKAYGSCRYQNKCPARHALLPEVDCKATQQPLNSGEVKVLVTNVVDASHY
FVRLLEHRPPTGDKVDTSMTMLDLRFKMAEWFGDLQHRSKYSSLCIGEMCAVSEDEETYH
RVKVCDITGVNSPGDRIKAELMFVDDGRKSFVSPNKLYNLPPHLRDVPYQALEVFICRVQ
PVDLDEKWTSKASMFVYDLLDKKTMDGRIVLRIGNTLWLDPLVERVYLSDLHAYCTNLFV
RSELLKNGFAVNNSNHMQLLYDLCKGKIEVPKLNLQSDRSEKKNEVEILPESKEYHDVHL
SAVNSPTLIYLQRSDTFKLLEKMNDEINERMKNEELTGMKIISLKTGSVCLGKWDDMWYR
VRILEELEDNMVEVFHVDFGDSETVSRDSLQKIPQEFLELPFQAIEAGLSYVAPQGETWE
EAAGDLIWDLAHFVTNDMKVLAAKVVTKQYAMNAGNHKYYVELYDRSTYFDVNLALELVW
SGYATPTEDSPYHVKELFSPPQEKQFFTIPILKLLDLCSQIYWGKGDCKAEAAGKEILKM
VTTCAKSKPLNLVAYGGLKAIIKLIGRVGYEDIHRCLLDSLTTAASKHDRICEEIVEQDG
CVGIVNSLERTNKPWLQEQVLVAMGKLLDTSIRFMPCFEDERVVLTLCELLDSTDKSKVQ
TALCYTLRKMCRLSEAVLLMTFDNKVCSRLVNCLGEGEKEVDPDVTTAALELLDTLLEKD
EKNEDSLTKPKVVKCVVGTLKGTEDETCILCGLKYCKYYGNLNRRNKTTLLQLELVPVLN
KLQSLTHLSSVIHDMCLDLKSSLIVNVQSSQTIKNTPIDQSKAASSQVDSILPQVLWSEN
IFTVRLSIKVVGVNPKSDPVQTTENSICFSALVDGKVYVVEYILYDSILPARSQVKVSSG
EVTVILRKNQKGRWPRLIKLKAKPANLMYDFDRYEDSSSAEEEEEDCGEDVPGPARKSKK
QRLPMGISAERQQQIMLRHRLEQDGSLTSSDENVDIPKEYNPYDIFDAEH
NT seq
6093 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacctggttgacattgagatcaccaaggtgaagtctcccgctttgttttatgcc
aaagtggttagagacttggagtcatcagaaggtttgtcattccagcagctggaaaagtct
atcaatgactttttcaacagtgagagtctatacttgccaaattacatacctaatgagggt
gatatatgtattgggcgtcgggtgtcagatcgttgttggtgccgggtccaagtaaaggga
gtgctttccaggagaagtggacctgaaggaaggtgcttttttctagattatggcatctca
gatttcataccacttaaatggttcagaaaggcctcaagtgactacctacaagtgccctac
caggtgaagaagttctgtttgtacggtgtgaaggctctgaccctagctgtggaaacagag
gaccttaccttcaaagaagtggtgtctgaattctgggatacctcagcagtgacattgatg
aaccaggttgtcaaagagagtcatagcacgaaggcacgcttcaggtgtgtggatcgggac
gatgttcaccatgtagatatctacttcatctcccccaaacaaaccatctggctcaacgaa
gagtttgtcactctcaagtatgctgcctggtgcaatccagaacaaactttagcagattcc
ggggaagctgtcatacagaaactgctgaaacacacaaagacattggagagcagtctctat
ggtgatgggggaaacaggacaaagaaacctctgtcgggtagctgcagtgatactgagagt
ggcaggagaacgttattctctcctgtaaaacactccctcaatagtactgtaccagtggtg
gagagaatgaagcgccgaggaatacatcattccgtggctgaccaaatcaccaacagcatt
tcaaacttgtcatctcagaatgtttcgggcactctagctgagggagatcatgttaaaaag
agccaaaagaacgatctaaaaaggaagccttttactattactgaaatcagggagagaaag
aaattgtgtgaaccttctgtgtgtagtgattctgaaattgtttataattcatcacccttt
catcagaaatccacaaacagcattcaggcattgacttctgtaggtatattgacatcatca
ggaacaccagtgtcgcccatctgctcttctgccctggataaaagtatcgaaagacttagc
atgtcaccggcttcatctaactcctccctaacctcacctattgtttcaaaaaatttcatg
ttaggaaggctaataagtgtgatatctcccaagaagaaggaatccactgccaccaatgat
ctgggaccaactaaaacttcaattaagaccaacacaagcaagttattgcacagtgagctc
agccttccactgacaccggcacggcttccgaaatcagccatgcgatcatctgcttcagaa
agtgatcctgataattcaagagtacaagtttcccgccagatatctacctcttcaagtaaa
agtagtgggtcagcttcatcagaagaggataaacttgtcagtgatattaagaagtctatc
ctgaagaaatcatcaagttctgtattgctgaatgacaagccttccgtcagatttcgggat
agtgaagctttagctgaaactcatgctaagaaaacacaaatgatgggtcggctcactggt
aaaaatgcaggccaaaggttattggacaagctgtgtgtgggagtgggttcacactcgatg
gggaagaagcctggggaagagcctaatttgaatgatgacggagtgctggtccacagtgaa
gacccactcaagcctatctacaacatccacgacacaccactggatcccatcattagagag
ggcctggataactatggcattgtggcaccaaagttcgtacagtgttacacctggccggca
ctcttgagaggacgcaatgtggtgggtatttcgcccagcgggtcagggaaaacattcgcc
taccttgccccgctcctcactgatctcctcaagccatccaactacaaggacattcccacc
ggcaatgggccgtacgccattatattggtgcctttctggaagagtgcccagatggtgtat
gatgtgaccaaaatacttctggggaacagtcgctccttccgtgtgctagtcgcctatgga
ggggggaacgaggagaatcaagtggtaccattgatcaatgggtgtgaactactgataacc
accccacgtagtttatctcgcctcctgcagcagaagtacacccatctggaacgcctctgt
cacgttgttatagatgatgctgagattgttcttgaagagttcagggaagagattcaggac
ttcatgatcagctattcccgggttgtagaggagcatgtggaacgctccgcccctcgtgag
gtactggtgttcagttcacgctggtgtaatatggtcaactcttttatcgatgcattcatc
cccgaccccaccctcatcatcacctctcgtttcgaagctgcaatttacggccgtgtcaaa
cagataccgctgctgtggcggacagaccagctggtgtcccagttcctggagctggtcaac
tccctggcacaggaaaacagcaagatgatcatcttctgtagcaatgtcaacaccacgctt
cacattcacaagttgttaaagagtcgctccttgtactctttattgactcatgacaaaatg
gacaccctgatgctggagcagattggaggggagtgggaaggtccctcagacaaaggaaag
attctcatttgtacggacgagagtgtggaggaattgaagattgtggatgctacagccatc
gtccattatgagctgccttcctcgaagacaaagtttgggaataggctctctaccatgagc
aagtactatcacaactcctccagcaaggaaaagattaatatagacccaacatcctacatc
cttatcacagaagatagtggtcgccaagtggaaactattctacagctcctcaagaggacg
aagagcaaaatcccacgtaacctctactctatggtcatgggactgaaccaggaaaaaaac
tgtgatggagacaaagacttgtgtgtggccctgaaggcttacggttcatgcaggtaccag
aacaaatgtccagctcgacatgccctgttaccagaggtggattgtaaagctactcaacag
ccactcaacagtggcgaggtcaaggtgttagttaccaatgtggtggacgccagtcattac
tttgtgaggttgttagaacacagacctcccacaggagacaaggtggatacttcaatgacc
atgctggatctaagatttaaaatggccgagtggtttggagacctccagcacagatccaaa
tatagcagcttatgtattggagagatgtgtgctgtgtcagaggacgaggaaacataccac
agggtgaaggtttgtgatatcacaggtgtgaactcaccaggagatcggatcaaggcagag
ctgatgtttgttgatgatggcagaaagagttttgtttcaccaaataaactatacaatcta
cctccacatctcagggatgttccctaccaggcattggaggtgttcatctgccgagtacag
ccggtcgacctggatgaaaaatggacaagcaaggcaagtatgtttgtgtatgatctactg
gacaagaagaccatggacggaagaatagtcctcaggattggtaatactctgtggctagac
cctctggtggaaagggtgtatctcagtgacctccacgcatactgcaccaacctgtttgta
cgttcagagctcctcaaaaatggctttgccgtcaacaattccaatcacatgcagctcttg
tatgacctttgcaagggcaaaatagaggtccccaaactcaaccttcagtcagacaggtca
gagaagaagaatgaggtggaaattttacccgagtctaaggaataccacgatgtccaccta
tctgcagtcaattctccaaccctaatatatctccagaggagtgacaccttcaaattgttg
gagaagatgaacgatgagatcaatgagagaatgaagaatgaagagctgacagggatgaag
atcatcagtctgaagacaggatctgtgtgtctgggcaagtgggacgatatgtggtacagg
gtgcgtatattggaagagttggaggacaacatggtggaagtattccatgttgacttcggg
gattcagagacagtgtcaagggatagccttcaaaagatcccacaggaattcctggaactg
ccctttcaggccatagaggcaggactgtcctatgttgcaccacagggtgagacgtgggaa
gaagctgctggggaccttatctgggaccttgctcacttcgtgaccaatgacatgaaggtc
ctcgctgctaaggtggtgactaagcagtatgcaatgaatgctggtaaccacaagtactat
gttgagctgtatgatagatctacctactttgatgtgaacctggctctggagctggtgtgg
tcgggatatgctactcccactgaagattctccctaccatgtaaaggaactgttttcacca
cctcaagaaaaacaattcttcactattcccatcctgaagctgctagacctgtgcagccag
atctattggggcaagggagattgcaaagctgaggcagcgggcaaagagatcctcaaaatg
gtcacaacatgtgctaaaagtaagcccctcaacctggtggcctatgggggtctgaaggct
atcatcaagctgataggccgagtggggtatgaggacatccatcggtgcctgctggacagt
ctcaccactgcagcatccaagcatgacagaatatgtgaagaaatagtagaacaagatgga
tgtgttggcatagtgaacagtttagaacggaccaataagccatggttacaagaacaggtt
ctagttgccatggggaagttgctggataccagtatcaggtttatgccctgttttgaagat
gagagagttgtactgacactgtgtgagctgttagactccacagacaagtccaaggtacag
acagctttatgttacaccctgaggaagatgtgccggctatctgaggcggtgttactgatg
acctttgacaacaaagtttgctccagacttgttaactgtcttggagaaggagaaaaagag
gttgaccctgatgttaccacagcagccctggagctcttggatacactactcgaaaaggat
gaaaaaaatgaggattctctaactaaaccaaaggtggttaagtgtgtggtgggcaccctg
aagggtacggaggatgagacgtgtatattgtgtggattaaagtactgtaaatactatgga
aacctaaacagaagaaacaagaccacacttctacagctggagctagtacctgtcctcaac
aagttacagagcctgactcacctgtcctcggtcatccatgacatgtgcttggacctgaag
tctagcctcattgtcaatgtccagtcctcacagaccattaagaacacaccaattgaccag
tccaaagcagcaagtagtcaagtggacagcatccttccacaagtgttgtggtctgagaac
atcttcactgtcagactcagtatcaaggtggtgggcgtcaaccctaagtctgatcctgta
caaaccacggagaactcaatctgtttcagtgcattggtggatggtaaggtatacgtggtg
gagtacatcctgtacgactctatcttacctgcccgtagtcaggtgaaggttagctctggt
gaagtgactgtcatcctacgcaagaatcagaaggggcgctggcctcgactcatcaaactt
aaggccaagccagccaacctgatgtacgactttgaccggtatgaggacagctcttctgct
gaggaggaggaggaggactgtggtgaggatgtgccaggcccagccaggaaaagtaaaaag
caacgcctgccgatggggatctcggcagagaggcaacagcaaataatgctacgtcatcga
ctggagcaggacggctccttaacatcaagcgatgaaaatgtcgatatccctaaggagtac
aatccctatgatatctttgatgcggagcattaa
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