KEGG   Mizuhopecten yessoensis (Yesso scallop): 110442748
Entry
110442748         CDS       T05079                                 
Name
(RefSeq) DNA repair protein XRCC1-like
  KO
K10803  DNA-repair protein XRCC1
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:myi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110442748
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:myi03400]
    110442748
DNA repair and recombination proteins [BR:myi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     110442748
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 110442748
NCBI-ProteinID: XP_021342176
LinkDB
Position
Unknown
AA seq 642 aa
MPEIKVQHVVSYSSADKGCPADNLLKAEGAHKWKTTAPAEKHATVVLQFEKASLIHSIDI
GNEGSAFVEVLGGKSSAKEDKDYQVLLVASSFMNPMDSRNNTNRNMVRMFGKEKFSKTAV
SEKWDRVKIVCTQPFNKTSSYGLSFIKFHSPPAAGEKEESTIGAKKLGAFLIKPEKEDDI
HMGSVFAKRSEVKETPPATGAAAIRAASRLSEESRSTSVLSSPAATLKSKPSQVSSSHKT
SDNHSSFKSEVSESSSSKPSKTKAAPKMSENRSKRKHEFSDDEGHGTDEDDSAPPKPSMR
KQSTSISSTASSVRSDHTKPALKKIKSEPVSESPVKSFKRLMEGVVFALSGFQNPFRAEL
RDMATEMGGVYKADWDKKCTHLICAFVNTPKYNQVRGKGRIVKKDWIQHCYKQKKFISWR
KYQLGDADYSSDEEDEEEAPVMKKKTPVPSKHKANQDDKASSSKGSSSKKAKLEVYDDNT
DVDSGEDTEDEVRRIKQKMEQNDKPKSNEADVYGDSTDNDEVSSKSAPRGNSKMEEEEDD
SNDSGLPELPDFFTNKNFFLYGDFSVSERRLLIRYITAYNGELENYMSDQTNYVLTYNKW
DDNFDEALADNSKLVFVKPKWIYACHEKYKTMPFQPYSVVPE
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgcctgaaattaaagtccaacatgtggtatcctatagcagtgctgacaagggctgtcca
gctgacaacctgttaaaagcagaaggagctcacaaatggaagacaacagctccagctgaa
aagcatgctacagttgtcctacagtttgagaaagcatcacttatccacagcattgacatt
ggaaatgaaggctcagcttttgttgaggttttgggtggaaaatcatcagccaaggaggac
aaagattatcaggtgttgctggtggcctcatcttttatgaatccaatggacagtcgtaac
aatactaacagaaatatggtgcgcatgtttggtaaagagaaattctccaaaacagctgtc
agtgaaaagtgggacagagtgaagattgtttgtacccagcccttcaataagacctccagt
tatggattgtccttcatcaagttccattcccctccagcagctggagagaaggaggaatcc
actattggtgccaagaagcttggagccttcctcatcaaaccagagaaggaggatgacata
catatggggtctgtgtttgcaaaacggtcagaggtcaaggagacccctccagccacagga
gcagcagctataagagcagcgtctcgactatctgaggaatctcgctctacttcagtgcta
tcatctcctgcagcgactctcaaatctaaacccagtcaggtttcttcatcacacaaaacc
agtgacaatcactcgtccttcaagtcggaagtcagcgagtcttcctcttctaaacccagc
aaaacaaaggcagctcccaaaatgtcagagaaccgcagtaagagaaagcatgagttcagt
gatgacgaaggtcacggtacagatgaagatgattcggcgccccccaaaccctcaatgagg
aaacagtccaccagcatcagttctacagcctcgtctgttaggagtgatcacaccaaacca
gcgctgaaaaaaatcaaatctgaacctgttagtgaatcccctgtgaagtccttcaagcga
ctgatggaaggagtcgtgtttgcactgagtggtttccagaacccgtttagggcagagctg
agagacatggccacagaaatgggcggtgtgtacaaggctgactgggataaaaaatgtact
catctaatatgtgcctttgtcaatactcccaaatacaaccaagtccgggggaaaggtcgg
atagtcaagaaagactggatccagcactgctacaaacagaagaaattcatttcttggaga
aagtaccaactcggtgatgctgattactccagtgatgaagaagatgaggaggaggcacct
gttatgaagaagaaaacccctgtccctagtaaacacaaggccaatcaagatgacaaagcc
tcgtcaagtaaaggatcctcatctaaaaaagcaaaactagaagtgtacgatgacaacaca
gacgtggattcaggagaagacacagaggatgaagtacgaagaataaaacagaaaatggag
caaaatgacaaacccaagagcaatgaagcagatgtgtatggtgattcgacagacaatgat
gaagtgtcctctaaatcagcacccaggggaaatagtaaaatggaggaggaggaggatgac
tccaatgactcgggactccctgaacttccagattttttcaccaacaagaattttttcctg
tatggagatttttctgtatcagagagacgtttattaatccgatacatcacagcgtataac
ggtgaactggagaactacatgagtgatcagacaaattatgtactgacctacaacaaatgg
gatgataactttgatgaggcgctggctgacaactcaaagttggtgttcgtgaaacctaaa
tggatttacgcctgtcatgaaaaatacaagactatgcccttccaaccctacagtgttgtg
ccggaatga

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