Mizuhopecten yessoensis (Yesso scallop): 110442822
Help
Entry
110442822 CDS
T05079
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi02010
ABC transporters
myi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110442822
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110442822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
myi02000
]
110442822
Transporters [BR:
myi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110442822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
R1_ABCA1
AAA_21
ABC2_membrane_3
DUF4162
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
110442822
NCBI-ProteinID:
XP_021342306
LinkDB
All DBs
Position
Unknown
AA seq
1906 aa
AA seq
DB search
MGFGNQLSLLLWKNFTLRWRQKYRVIAEVLAPLILLFVLVGVRTRPDLKWNHPECHFDGK
SMPSVGIVPFLQSFFCTFNNTCYENVTPNEMAGNTDDYKDSLMTKLVEDITDVLNNNMDR
KLILDLIGTWDIISSLSAKILNGSTKGHVKVLSLFKNPRELVQEIVNNSITLSEGALVHL
LNASIDFGQFNRPHLSDVLRDFEVCPRVGKSVGPKKSAAQVRDFVCSSDSMLESFRFKDV
AARRTVQAELCRIPEAQLVSLYDLFKNKYSIQHFIFQVLRFVFLNTGKIPNVTKIYGKLK
GLFKDVKDLDSTDAATFEKPIQDLIAFFSKTGKPSPEVIMEQMGKFVCGRNSFMQMTSTK
SKDILDRFNSFKRPDIKDDKDKGGNDYGPNSPVCMELVELMNANINTQILWKHLRPVVLG
KIPYAPDTAAVREIIKGANRTFSDLARMVKLAEDWEDYAEYLEKYLKTSPTMDMIRAFAS
SCLCDILESKTMNLIKSKTKSKNVCRFLQTYLSKDPKADGNFDWEKTLHYTKIFARVVAE
YGKCFQFDKFVGYSSEDELIENSLDMIEADNFWGALVFDVKPGADPLPTHLSYKIRMDTT
KVDDTKRVTDKYWRPGPRRRAGMETKYLTYGFAYLQDMVDHAIIKYQTGREDDTGVILQQ
FPYPCYVEDSFMEVVSKTLPLFLVLAWIFPVALLCKNIVYEKEKRLKEMMKIMGLGNGVH
WMAWFINAFVTMFITVSLLVIICKYGKIIQQSDPVILLLFFTSFGVATISMVFMISVCFS
QANLAACSAGFIYFIMYQPYSFAKRWEDVLSGWNKMSVCFSSNVAFGFGCTYIARFEEQN
IGVQWSNIAKTPLVDDEFSMLYCILMLWLDAILYGLITWYIEAVFPGQYGIPRPFYFFFL
RSYWCGTGNRKVKGEGGEEEEEESTYEPEPVTGINMEDEPMGRPLGVSIRNLRKAYGKKM
AVDGLSINFYEGQITSFLGHNGAGKTTTMSILTGLFPPTEGTAYVYGKDITTHMEDIRSS
LGLCPQYNALFPYLTLKEHLWFYARLKGLTNVQAKAEAKQLIQDIKLPHKKHAFPKMLSG
GMKRKLSVAIAFVGNAKTVILDEPTAGVDPYARRSIWELLLKFKKNRTILLSTHHMDEAD
VLGDRIAIISQGKLCCCGSSLFLKSLYGNGYYMTLVREGAEEIDEENDEYEMIYENVLPL
LKPKRREGRLDVDEGFAERSNDNDISFLMPTPPPDGDLKPAFSEKRLTAFINKFVIEAKL
VESNKSELTYQLPDYGPQTGDFVFMFQELERCHKDMGISSFGISDTSLEEVFLKVAETAD
ENDKETIKNPNDEVKRKRLEEVSDGGRVPRPVTQMSFRRNKRQSFLRVTQRQQLQEIQEQ
EVQQQMENPIETREEVVYLDLDGIVNPLGWGQVGRNLFSMFVCGVVFFLLNILIEHNFFI
HKKVGPTPEEEVEDEDQDVARERARVLSEEGENDIIRIDNLTKVYKVPGGKGRHVAVDRL
CLGVPKGQCFGLLGVNGAGKTTTFKMLTGYLGMTHGNAYINGFSIVTAVKEVRRSIGYCP
QFDAFDPLMTAREVLYFFARIKGIPSSDLKDVVDWAITKLGLTQYADKPSGTYSGGNRRK
LSTAIALIGNPSVIFLDEPTAGMDPGARRFLWNCINNIVKDGRSVILTSHSMEECEALCS
RLAIMVNGRFRGIGSIQHLKTRFGNGYIVIVRIAGDRPDLDIVDSFITETFPSANLRERH
HNMLQYQLGSEVPLSHIFSEIEAVRESFNIEDYSVSQTTLDQVFINFAKMQTDSLDSEAA
TAESEDTTDGLQHDNLSRATSMTTVNMDRRMSSSTLGGASSAEVVGDGYSTIAAVPPRDG
TNSEGYTTIKELSSPVKYAAPAPRLKRKPRVLESHNDNNKDDGFNI
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atggggtttggaaatcagctgtctttacttttgtggaaaaacttcactttgagatggcgt
caaaagtaccgtgtgattgcggaggtgttggccccccttatcctactctttgtacttgtg
ggagtacgtactcgcccggatctcaagtggaaccacccagaatgtcactttgatggcaag
tccatgccgagtgtgggtattgtgcctttcctacagtcgttcttctgtaccttcaacaac
acgtgctacgagaatgtcactccaaatgaaatggcgggaaacacagatgactacaaagat
tctttgatgacaaagttggttgaagatatcacagatgtcctcaacaataacatggaccgg
aaactgatccttgatctgataggaacctgggatattatcagctccctgtctgctaaaatc
ctcaacggctccacaaaaggccatgttaaagtgctgagcctttttaagaatcctcgagag
cttgttcaggaaatcgtgaacaatagcatcactttgtcagagggggctttagtgcacctt
cttaatgcatcaatagatttcggtcagttcaatcgtccacaccttagcgatgttttgcgt
gacttcgaagtttgtcccagggttggtaagtctgttggaccaaagaaatctgcagcgcag
gttcgtgactttgtgtgttcctcagattccatgctagagtcattcaggttcaaggacgtt
gctgcccgacgtacagttcaggccgaactttgtcgcatacctgaagcacaacttgtcagt
ttgtatgacctcttcaaaaacaaatacagcatccaacatttcatatttcaagttttgagg
tttgtttttctcaatactggaaaaataccaaacgttactaaaatctacggaaagttgaaa
ggcttattcaaagatgtaaaggatctggactctacagatgcagccactttcgagaagcca
attcaagacctcatagcatttttttcaaagaccggaaagcctagcccagaagtgataatg
gaacaaatgggaaagtttgtctgtgggagaaactccttcatgcaaatgacatcaactaag
tcaaaggatattctagatcgatttaattccttcaaacggccagacatcaaggatgacaag
gacaagggggggaatgattatggaccgaactcgccggtttgtatggagttggtggagttg
atgaatgccaatataaacacacaaatcttatggaaacatctgcgcccagttgtcctggga
aagattccctacgcaccggacactgcagctgtcagggaaattatcaagggggccaaccgg
acatttagtgacctggcaaggatggtgaaactggctgaagactgggaggattatgccgag
taccttgagaagtatctcaagactagtcccaccatggatatgatccgggcgtttgcatcg
tcgtgtttgtgcgatatcttggagagcaagacaatgaacctgatcaagtcaaaaacaaaa
tccaagaatgtgtgtcggttcctacagacctacctcagtaaggacccaaaggccgacggc
aactttgactgggagaagactctccattacaccaagatatttgcccgagtagtggctgag
tatggcaagtgtttccagtttgacaagtttgttggttactcctcggaggacgagctcatt
gagaacagcctcgacatgattgaggctgacaacttttggggagccctggtgtttgacgtg
aagcctggagcagatccgctccctacccatctctcatacaaaatcaggatggacaccacc
aaagtggacgacactaaacgcgttactgacaagtattggcgccctggcccccggagacgt
gcgggaatggagactaaatatctgacgtacggtttcgcctacctacaggacatggtggat
catgctattatcaagtaccaaacaggacgtgaggatgatacaggcgtcattctccagcag
ttcccctatccttgctatgtagaggactcgtttatggaagtggtctccaagacgttgccg
ctgttcctcgtcctggcctggatcttccccgtagccctgctgtgtaagaacatcgtgtac
gaaaaggagaaacgactgaaggagatgatgaagattatgggactagggaacggtgtccac
tggatggcctggttcatcaacgccttcgtcacaatgttcatcaccgtcagcttgctggtt
atcatttgtaagtatgggaagatcatacaacaatctgaccctgtgattctgctgctgttc
ttcacctccttcggtgtggctaccatcagcatggtgttcatgatcagcgtgtgtttctcc
caggccaacctggccgcctgctcagcaggcttcatctacttcatcatgtaccagccatac
agctttgctaaacgctgggaggatgtcctcagcggttggaataagatgagtgtgtgtttc
tcgtcaaatgtggcgtttgggtttggctgtacctacattgcacggtttgaagaacagaac
attggagtacaatggagtaacattgccaagacccctctggtggacgatgagttcagcatg
ctttactgcatcctcatgttgtggttggacgccatcttgtacggacttatcacttggtac
atagaggccgttttcccaggacaatatgggatccctcgaccattttatttcttttttctc
aggtcttactggtgtggtactggaaacagaaaggtcaaaggtgaaggtggagaggaagag
gaagaagaatctacatatgagcctgaaccagttacaggcatcaacatggaagacgaacca
atggggcgtccccttggagtgtcaatcagaaatctcaggaaagcctatggaaaaaagatg
gcagttgatggtcttagcatcaacttctacgaaggtcaaattacatcatttctgggtcac
aacggtgcaggcaaaaccaccacaatgtcgatactgacaggcttgttcccaccgactgag
ggtacggcctacgtctatgggaaggacatcaccacccacatggaggacatccgatcgagt
ctggggttatgtccgcagtataacgccctcttcccttatttgactttgaaagaacatctg
tggttctatgcacggctgaaggggctgaccaacgtccaggccaaggccgaggccaaacag
ttgatacaggacataaagctaccccacaagaaacatgcctttcctaaaatgctctcaggt
ggtatgaaaaggaagctctctgttgctatagcgttcgttggaaatgccaagactgtgatc
ctggatgagccaacggcaggtgttgatccttatgccaggcggtcgatctgggaactccta
cttaagttcaaaaaaaaccgtacaatcctgttgtcaactcaccacatggatgaagccgac
gtcctcggagacaggatagcgatcatctcacagggaaagctctgctgttgtggctccagc
ctcttcctcaagtctctctacggtaacggctactacatgactctggtgcgggagggtgcg
gaggaaatagacgaggaaaacgacgagtacgagatgatatatgaaaatgtcctgccatta
ttgaagccaaaacggagagagggtcgtctagatgtggatgaaggatttgcagaaaggtct
aatgataatgacatttcttttctgatgccgactcccccgcctgatggtgatctgaaacca
gcattttctgagaagcgattgacagcctttataaacaaatttgtgattgaggcaaagctt
gtggagagcaacaagtcagagcttacgtaccagctgccagactacggcccacagacgggc
gattttgtgtttatgttccaagaactggaacgctgtcataaagacatgggcatttccagc
ttcggaatctcagataccagtctggaagaggtgttcctgaaagtggcagaaactgctgat
gagaatgacaaggagacaataaaaaacccaaatgacgaggtaaagaggaagagactagag
gaagtatctgatggtgggcgtgtacctagacctgtcactcagatgagtttccgtagaaac
aagcgtcaatcattcctgagagtaacgcaaagacaacagttacaggagatacaggaacaa
gaagttcagcaacagatggaaaaccctatagaaacaagggaggaagtggtatatctagat
ctagacggcattgtaaaccccttagggtggggacaagttgggaggaaccttttctcaatg
tttgtctgtggcgttgtattcttcctgcttaacatcctaatagaacataacttcttcatt
cataaaaaggtaggaccaactcccgaggaggaggtggaggacgaagatcaggatgtcgcc
cgggagagggcacgggtcctctcagaggaaggggagaatgacatcattcggatagacaac
ctcaccaaggtgtacaaggtgccgggtggcaagggacgccatgttgccgtggataggctc
tgtcttggtgtgccaaaaggacagtgcttcggactgctgggtgttaatggagcaggcaag
accacaaccttcaaaatgttgactggctacctgggaatgactcatggaaatgcctacatc
aatggattcagtattgttacggcggtgaaggaggtccgacgcagcatcggttactgcccc
cagtttgatgcctttgacccgctaatgactgccagggaagtgctctacttctttgccagg
attaaagggatcccttcatcagatctcaaagatgttgtagactgggccatcaccaagctg
ggactgacgcaatacgctgacaaaccttcaggaacctactccgggggaaatcgccgcaaa
ctctcaaccgccatagctctcataggcaatccttccgttatatttctggatgagccgaca
gcaggcatggacccaggagccaggcgatttctatggaactgcattaacaatattgtcaaa
gatggccgctccgtcatcctaacttcacacagtatggaggagtgtgaagccctgtgtagc
agactggccattatggtgaacgggcgatttagaggcattggtagtatacagcatctcaaa
accaggttcgggaatggttacatagtgatagtgcgaatagctggggatcgccccgacctg
gatatagtggacagctttataacggaaacttttccgtctgccaacctccgggagaggcat
cacaacatgctacagtaccagctgggatctgaagtaccactgtcccacatcttctctgag
atagaggctgtcagggagagcttcaacatagaggattactcagtctcccagacaacgctc
gaccaggtgttcataaactttgccaaaatgcagacagattctttggacagtgaagcagct
acagcagaatcggaggataccacagatggattacaacacgacaacttaagtcgcgcaaca
agtatgacgactgtaaacatggacaggagaatgagttcatccacactagggggcgctagt
agtgcagaggtagtgggtgatggttactccaccatcgcggctgtgccaccaagggatgga
acaaacagcgagggctacaccactattaaggagttgagcagtcctgtcaaatatgcagca
cctgcacctcgactaaaacgcaaacccagagtactagagtctcacaatgataacaataag
gacgacggattcaatatatag
DBGET
integrated database retrieval system
