KEGG   Mizuhopecten yessoensis (Yesso scallop): 110443220
Entry
110443220         CDS       T05079                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:myi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:myi04812]
    110443220
Cytoskeleton proteins [BR:myi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     110443220
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Katanin_con80 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_IFT140_1st eIF2A NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_WDR19_1st WD40_RFWD3 Ge1_WD40 Beta-prop_LRRK2 Beta-prop_NOL10_N Beta-prop_pof12 Tricorn_2nd Beta-prop_DCAF12 Beta-prop_ACSF4 Tricorn_N Beta-prop_RIG_1st Beta-prop_WDR35_TULP_N PD40
Other DBs
NCBI-GeneID: 110443220
NCBI-ProteinID: XP_021342963
LinkDB
Position
Unknown
AA seq 673 aa
MSHTKRAWKLQEFVAHAANVNCLAIGHKSGRVMVTGGEDRKVNLWAVGKPNCIMSLTGHT
TPVEAVRFGHEEEIVVAGSVSGALKIWNLEEAKIMRTLTGHNASIRSLDFHPFGDYAASG
SMDCNIKLWDIRRKGCIYTYKGHTSSVNCVRFSPDGKWIASASDDGLVKMWDITAGRMLT
ELTEHTGPVNVVEFHPNELLIASGSSDRTVKFWDLETFKMVSTTDGDSSPVRRIFFHPEG
QCMFSGGRDVMKVYGWEPAKCYDSIPMSWGEVADIGLAQNQLICAAFSKTNVSSFVVDLQ
RVKPCGTVPHSDGPPSPSVGVAPHNMSNSSSGRRSFITERPPTTSTRQASVPKEEAEEPT
HDKDDMSDESAADIQSPAVYNNIFRPKSKLSRSPTRQSPFMPPPEDGQSEIFPVHQPAST
PAPVTQRTKSVTKTASKPSVPPVSKTPSATPVVKAVSNPTPKPNSTPAPPPKEPDPIAGI
AAEDFLPKSAYGGSTPSGEPNEEEVLSAVLKGHGAMAQVMSGRSKNIQIVRAMWTSGNTK
TAVDSAISMNDQAVLVDLLNVLNLKSGLWSLELCATLLPLVKDLLQSKYDSYVMTACNAL
KIILRNFGPVIKSNLTAPPSVGVDISREERYRKCNKAYSVILQIRSDMDKRQNLQGNVGT
IFRELQILMNNLE
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgtcacatacgaaaagagcatggaaactccaggagtttgtagcacatgctgccaatgta
aactgccttgctataggacacaagtctgggcgggtaatggtgaccggaggagaagaccgg
aaggtcaacttgtgggctgtaggcaagcccaactgtattatgagtctaacagggcacacg
actccagtggaggctgtacgctttggccacgaggaggaaatcgttgtagcaggatctgtt
tctggagctcttaaaatatggaatctagaggaagcaaaaatcatgagaacacttactggt
cacaatgcaagcattaggagtcttgatttccatccatttggagactatgctgcttcagga
tctatggactgtaatataaagctatgggatatacgacgaaagggctgcatctacacatac
aagggccacactagcagtgtgaactgtgtacgcttcagtcctgatggcaagtggatagca
tcagccagtgatgatggattagttaagatgtgggacatcacagctggtagaatgcttaca
gagcttacagaacacacaggaccagtgaatgtggtagagttccaccccaatgaactgttg
attgcctcaggcagctctgatagaactgtaaaattctgggacctagagacatttaagatg
gtatctacaacagacggagattcctcccctgtcagacggatatttttccatccagaagga
caatgtatgttcagtgggggtcgtgacgtaatgaaggtttatggctgggaacctgcaaag
tgctacgactctattccaatgagttggggtgaagttgctgatattggcttagctcagaac
cagctcatttgtgctgctttcagtaagacaaacgtgtcaagttttgtagtagacttacag
agagtgaaaccatgtggcactgtacctcactcggatggcccgcccagtccttctgtaggt
gtggcacctcacaatatgtctaacagcagtagtggaaggaggagttttatcacagagaga
cctcccactacatcaactagacaggcaagtgtacctaaggaagaggctgaggagccaaca
catgacaaggatgacatgtcagatgaatctgcagcagacatacagagccccgcagtctac
aataacatattccgaccaaaatcaaagctctcgcgctctccaactagacagtcaccattt
atgccacctcctgaggatggccagtccgagatattccctgtacatcagccagcctcgaca
ccagcccctgtcacacagcgaacaaagtcagtcaccaagacagccagcaaacccagtgta
cccccagtctccaaaacacctagtgcaactccagttgtaaaagcagtctcaaaccctacc
ccgaaacctaactcgacaccagctccgccacctaaagaaccagatcctatagctggaatc
gctgcagaggactttttacctaaaagtgcttatgggggctcaacgccaagtggagaacca
aatgaggaggaggttctcagtgctgtcctcaaaggacatggtgcaatggctcaagtaatg
tctggtcgcagtaaaaacatacagattgtccgagctatgtggaccagtggaaataccaag
actgctgtagactcggccattagtatgaatgaccaagctgtattagtagatttacttaat
gttcttaacctcaaatcgggactgtggagtttagaactatgtgctacgttattgcctctt
gtcaaagatctgctgcagagtaaatatgacagttatgttatgacagcctgtaatgccttg
aaaattatcctaagaaactttgggcctgtgataaaatcgaatctgaccgctcccccatct
gtgggcgtggatatctcgcgggaagagaggtatcggaagtgtaacaaagcttatagtgtt
attttacaaataagaagtgacatggacaaaagacaaaaccttcagggaaacgtcggtacc
atattccgtgaactacaaattctcatgaacaacttggaatag

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