Mizuhopecten yessoensis (Yesso scallop): 110443247
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Entry
110443247 CDS
T05079
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03013
Nucleocytoplasmic transport
myi03015
mRNA surveillance pathway
myi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110443247
09122 Translation
03013 Nucleocytoplasmic transport
110443247
03015 mRNA surveillance pathway
110443247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110443247
03041 Spliceosome [BR:
myi03041
]
110443247
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110443247
Spliceosome [BR:
myi03041
]
Complex C
Other components
EJC/TREX
110443247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
110443247
NCBI-ProteinID:
XP_021343013
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MADEEEILLQGKSIAGLRVVDLKKECDKRGLSKAGSKSQLIERLKAQLLLEKLQQQPINE
SDEAPNSKLREEGVTGNNAFIKQYLEKQQKLLVVEREARKRFSEEESESSQDERPGDSPK
KMPSREPSIPEESTLPDPPSKKHQISAPLPASPPQRAPPPPPTPPPPHAQMADGAGDSET
GKRTRRRSSLNEEEMAEPKEAVEERIPRKSRRWRREPEVKEPEPERMSRTRRQSSQEVKE
AVEEKVTSETEKNDEEKVQEVVAVEPEINSKSESQVSSSQMVEIIADHQKEEKINKTEHD
KSNKAPAAPEAMEVEQSEAAMEEKQTENVTESIKDTKSPQKEIEVVEKIPKEEEVVPEKR
ADDAREKTHNKKEKSRSRSSSSSSSSSSRSRSKSAEKRKRSRSSSHSKSRSRSRTPKKSA
ASRISRKRSSSSSSSSSRSRSRSSSESDTSASPSKQKGRSPSPKLKQKARSPSPSKPKQT
ARSPSPLKVQERRRSSSPSPPPKPKEKSPGRSNDSSSLSPQRSRQKTKSAASSRSSSSSS
SSGSDRSRSRSKSPVQSDHSPPNSPQTSSLAKATQGSKKAEEEQIDVETLVEKKEESSAD
HADTLIVTEDTSEKALDHKEEVGEQSASQDVNPKKISLTGRESRDKEEEKGDDAEKENKK
EKPVRKRKWGSARSSTDAKPVKRISNINISTDSLKELIPDIKMTEPVLDLGNDDEKISDE
EEDQRDVVKIRRTVVMKDQEEETEERKEEEDDERINVKMEVKQEKEEEESGSSAEEEERE
QTTVTPKKDITPVKEPKIIRRISQPVPLQEIDEPIAPQRSQSPARNPVSKIIHVRNLVRP
FTLNQLKDLLRRTGNIVENEFWIDKIKSHCFVTYETEENAVQTRKALHNTKWPSSNPKLL
WLEFASPEEIEFNKQKEQGPKAAVRRDSQQEMKEKREKEREKREKEAQKKRDEPKPPPVR
EWDRDKIRQSRERELGPTGKRRSRSPSLGRSRRGRERSRDKERREKKAVPDKKVEDEPPA
KLLDDLFKKTKTTPCIYWLPLTDAQAELREKERLERVALREKIRARESPGDNRPPMRERG
NRPDRPDMDRRRPPSPYRRPSPPRRGGPEQDSFRDRSGPRRPDRGGPPRGAPRSRSKSPR
RRR
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagaggaaattctgttacaaggaaaatcaattgccgggctacgtgttgtt
gatttaaagaaagaatgcgacaaaagaggtctttcaaaagcaggaagcaagtcgcaatta
atcgaaaggcttaaagctcaacttctcttggaaaaattgcagcagcagccaataaatgaa
tcagatgaagctccaaacagcaagctcagggaagaaggagttactggaaacaatgcattt
ataaaacagtatctggaaaagcagcagaagctacttgttgtggagagagaagccagaaag
cgattttcagaagaagaatcggagagttctcaggatgaacgccccggggacagtccaaag
aaaatgccttcccgagaaccaagtattcctgaggagagcacactccctgatccaccctca
aagaaacatcagatcagtgcaccactgccagcatctccaccacagagggctccccctcct
ccaccaacacctccgcccccacatgcacagatggcggatggagcgggagattcagaaact
ggcaagcggacaagacggaggtccagcttgaatgaggaggagatggcagaaccaaaggaa
gctgtagaggaacgaatccccaggaaatcacggcgttggaggcgggaacctgaagtgaag
gagcctgaaccagagaggatgtcccgcaccaggaggcagtcctcccaggaagtgaaggaa
gcagtggaggaaaaggtaacatcagaaacagaaaaaaacgatgaggaaaaagtccaggag
gttgtagctgtagaacctgagataaattcaaaatcagagtcccaagtcagcagctcacaa
atggtggagattatagcagaccatcaaaaagaagagaaaatcaataaaacggaacatgac
aaaagtaataaagcgccagcagcaccggaggccatggaggtagaacaatctgaggcagct
atggaggaaaaacagacagaaaatgtaacagaatccatcaaagacacaaaatcgccacag
aaggagatagaggtggtggaaaagataccaaaagaggaggaagtagtgccagaaaaacgt
gcagatgatgcgagagaaaaaacacataacaaaaaagaaaagtccagaagtagatcatca
tcaagttcttctagttccagttcaaggtccagatcaaaatcagcagaaaaacgtaaaagg
tcaaggtcatcttcacattctaagtcaaggtcaagatcaagaacaccaaagaaatcagca
gcaagtagaatcagccgaaagcgttcttcttcaagttcatcaagcagctcacgttcaagg
tcacgttcatcttctgagtcagacacttcagcttcaccatcaaaacagaaaggaaggtca
ccatctccaaagctgaagcagaaggcaagatcaccttcaccttcaaagccgaaacagaca
gcaagatcgccatcgcctctaaaggtgcaggagagacgaaggtcttcttcaccttcacct
ccaccgaagccgaaggagaaatctccggggaggtcaaatgattcaagttcattatcccct
caaagatcaaggcaaaagacaaagtcagccgcaagttcaaggtcatcatcgtcatcttca
tcttctggtagtgacagatcccggtctcgttcaaagtcaccagtgcagagtgaccactca
ccacccaactctccacaaacttccagtctggctaaagccactcagggttccaagaaggca
gaggaggaacaaatagacgtggaaaccctagttgagaagaaagaagaaagttcagcagat
catgctgacactctgattgtgacggaggataccagcgagaaagcactcgatcataaggag
gaggtcggggaacagtcagccagtcaggatgtcaatccaaaaaagatttcactcacaggt
cgagagtcccgggacaaagaggaggagaagggagatgatgccgagaaagaaaacaagaag
gagaagccagtccgtaaacgaaaatggggttcagcacgatcatcaactgacgccaaacca
gttaaacgaatctcaaacatcaacatctccacggactcgttaaaggaactgattccagat
ataaagatgacggaacccgttcttgaccttgggaatgatgacgagaaaatatcagacgag
gaggaggatcagcgtgacgtggtgaagatcaggcggacagtggtgatgaaggatcaggaa
gaagaaacagaggaaaggaaggaagaagaggacgatgagaggattaacgtcaaaatggag
gtgaagcaagagaaggaagaggaggaatctggcagctcggcagaagaggaagaaagggaa
caaacaacggttacccctaaaaaggatataacacctgtgaaagagccgaaaatcattcga
cgaatcagtcagcctgtcccattgcaggaaattgatgaaccaatcgcaccccaacgttcg
caatctcctgctcgtaaccctgtcagcaaaattatccatgtacgaaatcttgtcagacct
ttcacccttaaccaattgaaagaccttctgaggaggacgggaaatatagttgaaaacgaa
ttctggattgacaagatcaaatctcactgcttcgtcacgtatgagaccgaagaaaatgct
gttcagacaagaaaggctctacacaatacaaaatggccatcttccaaccctaaattattg
tggctagagtttgcctcccctgaagagattgagttcaacaagcagaaagaacaaggacca
aaagcagcagttcgaagagatagccaacaggaaatgaaggaaaagagggagaaagagcga
gagaagagggagaaagaggcacagaagaaaagggatgaacccaaaccaccgccagttcgg
gagtgggacagggacaagattcgccagtcgagggaaagggagctaggaccaacaggaaag
aggcggtcaaggtctccatctctgggacggtctcgacggggccgggaacgcagcagggac
aaggaaaggagggaaaagaaagctgtaccagataagaaagtggaagatgagcctccagct
aaactgttggatgacctgttcaagaaaaccaagactactccctgtatatactggcttcca
ctgacagatgcacaggcggagctgagggagaaggagagactcgagcgggtagccttgagg
gagaagatacgtgccagggaatctcctggagacaatagacctccaatgcgtgaacggggg
aacagaccagaccgaccagacatggacaggcgcagaccaccgtcgccttacagacgcccc
agtccaccacggcgaggaggccctgagcaggactcattcagagatcgaagtggtcctcgg
cgtcctgatcgaggtggaccaccacgaggagcgcctcgtagtcgtagcaaaagtccacga
cggcgtagatga
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integrated database retrieval system
