Mizuhopecten yessoensis (Yesso scallop): 110443277
Help
Entry
110443277 CDS
T05079
Name
(RefSeq) TATA element modulatory factor-like isoform X1
KO
K20286
TATA element modulatory factor
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
myi04131
]
110443277
Membrane trafficking [BR:
myi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110443277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
SlyX
Motif
Other DBs
NCBI-GeneID:
110443277
NCBI-ProteinID:
XP_021343077
LinkDB
All DBs
Position
Unknown
AA seq
1461 aa
AA seq
DB search
MSWWNASSFSDLASQAIKNAQKKIDKVLEIDEEGLKETKPSTINKPTKEETSKQETKDDF
WNTWVPSPQSEGAEGATEKEGARSSWSTMPWGSVHQDLEPKKKTSPTLPTSPESKGMKQK
ALDPISTTVQQSGVSKKAGHSAKSEGKSSKRSTDKVTKNSSDNDRKAVGNIPVVESKEKV
ENWDSSSAWSSEPLIAWQGEGQESGADLDLEGSQHASFQGKGQELRPDSNYKKPNKENEE
SLTDLCPGNKELKMLEKEDSKGDKTKELLPEDSDQTISSKTLDKDLSDSLLDDKSTDCKT
DKSSSISVIESVEGVISFSDDSDGKCDQSSSVSLLQTDSGEMFPCHSEGIEDHTIDLDSV
VIQTSETQDSGMASSVMDHEVKESPNPADTGSELVICENIDTEKHASEGKDSETQDDKEE
ALSESTSDPGSVMTKIDLKETSVDADNVLAQSSISSGSGEGTMEEIIKDPGVTEIDVLES
LGSVHSPSTCSSLCSSDTSKLDSSMDTHTSEDTVVDNRGEDERVGEISQEEEISAGEVTP
EEASYKEVTQNTMSGSVQVSQQETGGQDLAEIQDDSHKITDSMFSVSSSSSYVKCMIEEA
MEDNSRSEDNNSDCHSTGGEKSECSRSTGGQESGDDIDTTTSSDIEIISTPNSINNGEPN
KMVDLSPLKIALQKTARRESPTHRRTDSASSSSTHSREGQGEQLSPGRDSLEDESQYGED
RDLPIDKQKLAPVREEKGDPYMIPQKVLKKRRLMRGCTLQTVPEHTEVRLTRDSYCDSTS
TSMASESTTTNNTPTPPISPQTGISAGGQKMAEMEEVILARESKLVQLSKENNDLLETNS
ILRNQIQQLEETRELELEDVSKVSTEFAGRIAESEKKLNSVIRERDTARKDLQKSFDDFA
KKVRGFQSEIEEKDQQIAELLQEGEKLSKQQLQSNNIVKKLRVKEKENDSLLTSQKKQID
DQQKELDHLRTVCESKDVMEKKQTDGITQLNSAVQKQEREISKLKGELTDAQERVRGLQA
ALDNSYKEIAELHKSKAAQDSKVQETALSLEMSVREELKATLTKEQFSFKQEREALIAQI
EDLRMSMSRMEKEHNRREDMLRQEISDLQMHLQEDEARNQDLTHSVTSATRPLLRQIENL
QSTYAAQSTSWEKLEKTLTDRIVDTQSQLAIAVEKERSANENVIDLTSNVTALESQNCRL
RQEKSQHIAQLEMLKTRVEVLEDAKNSETAQIEIVKHQMSQELSEVKKEKMFLETQLDME
RTKLDQEKKKMAIAQDQIAQLEREIQRPHSRGSMSPQNLQRMDSMSSFGEPSALNTSFTQ
DDLERNFLLSPGSSGLGSLTKSSLYENIRHSGAANLLENLQSQLKLREGEITQLQSEIQQ
LERTRESMARELVNLTNQNEDLKSQVESLPVIKNQMQDLNQRYNAMLQMYGEKVEEAEEL
KMDLHDVKEMYKTQIDHLLTK
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgagttggtggaatgctagcagcttctcggaccttgcctctcaggcaatcaaaaatgca
caaaagaaaattgacaaagttctggaaattgatgaagaaggattaaaggaaacaaaacca
tctaccattaacaaacctacaaaggaagagacttctaaacaagaaactaaagatgatttc
tggaacacatgggtaccttctccccagtctgagggggcagagggagcaacagagaaggag
ggggctaggagctcatggtccactatgccttggggttcagtccatcaagatctagaaccc
aagaaaaaaacaagtccaactttaccaacctctcctgaaagcaaaggaatgaagcagaaa
gcattagatcctatatctactacagtgcaacagtctggcgtcagtaaaaaggcaggtcat
agtgctaagtcagaggggaaaagttcaaagcgaagtacagacaaggttacgaaaaatagt
tctgacaatgataggaaagcggtaggcaatattccagtagtggaaagtaaagaaaaggtg
gagaattgggattcttcctcagcctggtctagtgaaccactgatagcctggcaaggtgaa
ggtcaagagagtggtgctgaccttgatcttgaaggctcacaacatgcatcatttcaaggt
aaaggccaggaattaaggcctgactcaaattataaaaagccaaataaagaaaacgaggaa
agtttgacagatctttgtcctggtaacaaggaattgaagatgctggaaaaagaggattca
aaaggagataaaacaaaggaattattaccagaagatagtgatcagactataagtagcaag
acattagataaggatctatctgattcactattggatgataaaagtactgactgtaaaaca
gacaaatccagtagtatatctgtgatagagtctgtagaaggggtgatttctttcagtgat
gacagtgatgggaaatgtgaccagtccagcagtgtgtcactcctacagactgactcaggg
gagatgtttccatgtcatagtgagggaatcgaggaccacacaatagatttagatagtgtt
gtgattcaaacgagcgaaactcaagattcagggatggcatcttctgtgatggaccatgaa
gtaaaggaaagtccaaatccagcagatacgggatctgaattggtgatatgtgaaaacatt
gacactgaaaaacatgcaagtgaagggaaagattctgaaacacaagatgataaagaagaa
gccttaagtgaatctacaagtgacccaggtagtgttatgacaaaaatagatttgaaggaa
acttcagttgatgcagacaatgttcttgcccaatcctccatttccagtgggtcaggtgaa
ggcacaatggaagagattattaaagatcctggggttactgaaatagatgtgttagaaagt
ttagggagcgtgcacagcccctcaacttgtagttctttgtgctcatcagacactagtaaa
ctggacagtagcatggacacacacacctccgaagacacagtggtggacaatcgaggagag
gacgaacgtgtaggggagataagtcaggaggaagagatcagtgcaggggaggtaactcca
gaggaggctagttataaggaagtaactcaaaatacaatgtctggttcagttcaagtttct
cagcaggaaactggtggtcaggatttggcagaaatccaagatgattctcataaaattaca
gatagcatgttcagtgtatcgtcaagtagttcatatgtaaagtgtatgatagaagaagct
atggaggacaacagcagaagtgaggataacaatagtgattgtcattccactggaggagag
aaatcggagtgttctaggagcaccggaggacaggaatctggtgatgatattgacaccaca
acatcatcggatattgaaataatttctacaccaaattctataaataatggtgaacccaac
aaaatggtggatctgtcaccactgaaaattgcattacagaaaacagctcgacgtgaaagt
cccacccacagaaggacagacagtgcgtcaagttccagcacccacagccgtgaaggtcaa
ggggaacaactgagtcctggtcgagacagtctggaggatgaaagccagtatggtgaggac
agagatcttccaattgacaagcaaaagctggctccagtccgagaggagaagggagaccct
tatatgatcccacagaaagtgttgaaaaaacggcgccttatgagaggatgtactttacag
actgtgcctgaacacactgaagttcgtctgactcgagacagctactgcgattccacatct
actagcatggcctccgagagtacaactaccaacaacactcctactccccccatctcacct
cagactggtatctctgctgggggccagaaaatggcagaaatggaagaagttatcctggct
agagaaagtaaactggtacagctaagtaaggaaaacaacgacctgttagagaccaacagt
atcttacgcaaccagatacagcagctggaagaaacgcgagaacttgaattggaggatgtg
agcaaggtttccacagagtttgccggtagaattgcagagtctgagaaaaaactaaacagt
gtgatacgggaaagagatacagcaaggaaagacctacagaaatcttttgatgattttgct
aaaaaagtccgaggattccagtcagaaatagaagagaaagatcaacagatagcagaacta
ttacaggaaggtgaaaagttatctaaacagcagctacaaagcaacaacattgtaaagaag
ttacgagtgaaggagaaggaaaacgactcactgttaacaagtcagaaaaaacagatcgat
gatcaacagaaagagttggaccacctcaggactgtctgcgaatccaaggatgtaatggag
aaaaaacagacagatggcatcactcaattgaattctgctgtacagaaacaagagagggag
atttctaagttaaagggagagctgacagatgcccaggaaagagtgcgaggtctgcaggca
gcactggacaactcttataaagagatcgctgagcttcacaagtccaaggcagcccaggat
agcaaagtgcaggagacggccttgagtctggagatgtctgtccgcgaggaactcaaagcc
actctgaccaaggaacagttcagcttcaaacaggagagagaggcccttatagctcagatt
gaggatttgaggatgagtatgtcccggatggagaaggaacacaaccggagggaggacatg
ctgagacaggaaatctcggaccttcagatgcatttacaagaggatgaggccagaaatcaa
gacctgacacacagcgtaacatcagccacacgacccctgctgagacagattgagaatctc
cagagtacatatgctgcccagtctacatcctgggagaagctggagaaaactctcacggac
aggatagtcgacactcagagccagctggccattgctgttgaaaaggagcggtcagccaat
gagaatgtgattgacctcacgtccaatgtgactgccctggaatctcagaattgtcgtctg
cgtcaggagaagtcacaacacattgctcagctagagatgctaaagacacgcgttgaggta
ttggaggatgccaaaaatagtgaaactgctcaaattgaaatagtgaaacaccagatgtct
caggaattatcagaagtcaaaaaggagaagatgtttctggagacacagctggacatggag
aggactaagttggaccaggagaagaagaagatggccatagctcaagatcagatagcccag
cttgagcgggaaatccagaggccacactctcgtggatcaatgtctccccagaacctccag
cggatggacagcatgtcaagctttggtgaaccgtccgctctcaacacgtcctttacccag
gatgaccttgaaaggaacttcctgttgtcccctgggagtagtggacttggaagtctgaca
aagtccagtctgtatgagaacatcagacatagtggtgctgccaatctactggagaatcta
cagtcacagctaaaactccgggaaggggagatcactcagttacagagtgaaatccaacaa
cttgagaggactagggaatccatggctcgagagcttgtcaatctgaccaatcagaatgaa
gatctcaagagtcaggtggagtcattaccagtgattaagaaccaaatgcaggatctaaac
cagagatacaatgccatgctacagatgtacggtgagaaggtggaggaagccgaggagctt
aagatggatctccatgatgtcaaagagatgtacaaaactcagattgatcatttactcaca
aagtga
DBGET
integrated database retrieval system
