KEGG   Mizuhopecten yessoensis (Yesso scallop): 110443640
Entry
110443640         CDS       T05079                                 
Name
(RefSeq) focadhesin-like isoform X1
  KO
K27498  focadhesin
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:myi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:myi03019]
    110443640
Messenger RNA biogenesis [BR:myi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     110443640
SSDB
Motif
Pfam: Focadhesin DUF3730 INTS7_N
Other DBs
NCBI-GeneID: 110443640
NCBI-ProteinID: XP_021343658
LinkDB
Position
Unknown
AA seq 1794 aa
MFKMEDVKKRLAFGNPAVQTQAVWRLYTEITKKASTLGRIDSKTPECVEIKLLWEYCGDE
VTVISRSACQVLVRLVTDGNADFLFILNGLLNQVPSARSLLGIVSGIRELLVLQIALVEN
QDQLYSCPYRLRTPPHPFITILTNRPEAWPLLQHQVYSLCCHGNKSVRQNAMEMLAPFLK
FVLVEPQQSSQYQPMKTSLERVLMQVIGQSQDQESARGILRFLTNILPYFQIRESQDLAK
TTQFVTEIILQCLSYCRADKCQRELRALAEFGLSLHHQGVLKGQGVTSLMDALMKVASSS
PEVMASDQNLITVATTLLSCSVDQVLSLLKMCKLILETDSRVISPVGAGMLVLPVLQILA
TPKSELIGRQLSVLHSLAGEIILNIEKKRKIPYEMVSDQDIKIGLTTASYQGQNFANWTK
VFSMQQEQAVSWMSGLMSSLKVTNHIPFSLTNLVSALLTMFRNDREASLALKTLTLIANR
DNTQAPWFLPLMLYQLGSESTPSVRFDILMTIPKLATHKVCVGPILKTIQSFGTFPAMKG
TYLQMLTDLWKIQDRCFPQLLKEIMESPKGYSLEVLLVKAKAIRDVCKLRPEQHGTDMLG
PLSDILTLCPGEEEAAVSSLALEGLYFLCEAEVINILSAWSVLADSLVRDSRPAVVEKIC
ELFSLVPSLEEQTADYEKFCEDAVMNLWLYTNSDDTKVCGAAFQALAMYRADQFKVSHLP
RHITEDLRQQAEHLSNEEEREVSVDELFPQVPALCYTRLLKTLPKEVLPDYEAFLAAMLA
KEVADLPRGIYHSSLWRQSAATNQSKAIGSIPAFITGHYYKTKQPGLRPGLAVSTLFCYD
PPLEVGRDGRPRKHYIITHGKNFQQMFKTLLQEVPIQPSEWHRSMVIPQAWTSFVDRLFT
AMVEGRRAEIELQLKRDHVSEDEARLKKQVAWLWVRDTLVDVIKISSRGNPTMQSNSIYA
LAGLAVTVNRHGNGLDTEAAKAAEDSSEFMSPPHWLTVVIDTIISLMDVTFTPKGKLIGL
CQQLSVDNRLPASLLAQASASVALSQVVPALITLDVDRIFMIINFLLSWLPGQPGVPESP
VLQFHGGLGLGMFLSRLLEEHFADISGTKGMLQIWKSFDKLEECCLAPNVKNRSGAILGL
GMAVCAMCEEGKTESRAHVVSIYDKLLTLCDELDPLDNIFQAVSVCVACIAGAAFSSNIL
LVTRVDTAVDKLMTTHSNHPQVTGVSLALGMLCYSLSRAGHPGIGDVRVRLFGTWMKAVS
SEGTAPMEKVAILNGLMALIGSERTLIPVQSGSVSSSDLNADDVIKVASQIVTSGNDLGI
QNNAAWMLGHLYLSACAVADTRASVPSTYGYLPEKSFLRAIVDFVSEAGKAGAETVPKEQ
VEVALTSLQEEVEQALPPVNWAGVLTPMMRMGFGDKVRRLSVKLAVKQSGSAPTAAMFLT
TWMTLPLLSTLDEGCQIVLYDALPKLICSIAPTAIGSLLGVGSSEPYIGQDGDTSPALVH
VLAGLTNALKVNDPPEAVTAVLYKAVATFYSKLSSCTQVPVLCLVADCLGNLPDDLFDKI
TGEDFLYDASHSKGCLVRCYLVVQGKQPITILNSCIDATFNNKRCNHSLISTYLQHCFYQ
VTQSRSEFTGVIPKLHWLVELLGHVRNIATGATTLSDDITDKTQVMDLAVDIIAAVLCLW
MSTSSACVLSVTTQLLTCPDISSSNTQDPKLPWKPSVSPRQVLPAYITGIQSEPWDQVLP
KVVDCWTTLLSRPDDIISRKTKSSLQDSLQILRHSTTFRKPTVWTEIYDTVQVK
NT seq 5385 nt   +upstreamnt  +downstreamnt
atgttcaaaatggaagacgtaaagaagagattggcttttggtaaccctgctgtacagact
caggcggtgtggagactctataccgaaataacgaagaaagcatccacactcggacgaatt
gattctaaaacaccagagtgtgttgagataaaacttctttgggaatactgtggtgatgag
gtgactgtgatctcaaggtcagcctgccaggtcttggtgcgtttggtaaccgacggcaat
gccgacttcctgttcattctcaatgggctcctgaaccaagttccgtcggccaggtccctg
ttgggaattgtaagcggaatccgtgaacttcttgtcctacaaattgcacttgtggaaaat
caagatcaactgtactcttgtccctaccgtttaaggacacctcctcaccccttcatcacc
atcttgacgaaccgtccggaggcatggcctctcctacagcaccaagtatacagcctctgt
tgtcatggaaacaaaagtgtgcgacagaacgccatggagatgctggccccctttctgaaa
tttgtactggtggaaccgcagcaaagcagccaatatcaaccaatgaaaaccagtctagag
agagtcctaatgcaagtcattggccaatcacaggaccaggaatctgccaggggaatactc
cgtttccttacgaacatcctgccatactttcagattcgggaatctcaagaccttgccaag
accactcagtttgtgaccgagatcatactgcagtgcctgtcatactgcagagctgacaaa
tgtcaaagagagttacgggccctagctgagtttggtttatccctccatcaccagggggtg
ctgaaaggtcaaggggtcacatccttgatggatgccctgatgaaagtagcatcatcttct
ccagaggttatggcttctgaccaaaacttaatcaccgtggcgaccactcttctttcgtgt
tccgttgatcaagtgctgtcactgctcaagatgtgcaagctgatccttgagacagacagt
cgtgtcatcagtccagtcggagcggggatgttggtcctgcccgttctccagatcctggcc
acacccaagtctgagttgattggtcgacagctcagcgtccttcacagtctagcaggggag
ataattctaaacatcgagaagaaacgaaagattccttatgaaatggtatcagaccaagat
ataaagattggtttgaccacagctagttaccaaggtcaaaactttgccaactggacaaaa
gtcttctctatgcagcaagagcaagcagtgtcctggatgtctggtctgatgtcatcgctc
aaagtgaccaatcacatccctttctccttgactaatctggtgtctgcattgttgaccatg
ttcagaaatgatcgtgaggccagtctggccctcaagaccttgactctgatagccaacagg
gacaacactcaggctccatggtttttgccgctaatgctgtaccagctaggaagtgagagc
actccgtctgtcagatttgatatcctgatgacgatacccaagcttgctacacataaggtg
tgtgttgggcctatcctgaaaactatccagtcctttggcacgtttccggcgatgaaggga
acttacctgcagatgttgacagacttatggaagatccaggaccgatgcttcccacaactg
ctgaaggagatcatggaatcaccaaaaggatactccctggaagtattgctggtcaaggca
aaggccatccgggatgtatgcaaattaagaccagaacaacacggtacggacatgcttggt
cctctatcggacattctcaccctctgtcctggagaggaagaggcagctgtatcgtctctg
gctctggaaggactttacttcctatgtgaagctgaggttattaacatcctgtctgcctgg
tccgtgcttgctgacagtctcgtccgggattcacgacctgcggtagttgaaaagatatgt
gaactgttttcacttgtaccatcattggaagaacagactgcagattatgagaaattctgt
gaagatgctgtgatgaatttgtggctgtataccaatagtgatgacacaaaagtgtgcggg
gctgcattccaggccctggccatgtatagggcagaccagttcaaggtgtcccatctcccc
agacatattacagaggatttgaggcagcaagccgaacacctatcaaatgaggaggagcgt
gaagtgtctgttgatgaactgttcccgcaagtaccagccttgtgctacacccgtcttctg
aagactttaccaaaagaagtcctaccagactatgaagcatttttggcagccatgttggca
aaggaggtcgctgatttaccaagagggatataccactcgtcgctatggagacagagtgca
gcaaccaatcagagcaaagctattggatctatcccagcattcattacgggtcactattat
aaaaccaaacagccaggattaagacccggtttggcagtgagcactctcttctgttacgac
ccgccactagaggtcggcagggatggtcgtccacggaaacactacatcatcacacacggc
aaaaacttccagcagatgttcaagacattgttacaggaggttccaatccagccatcagaa
tggcacagaagtatggtgatcccgcaagcctggacgtcgtttgtagacagactttttacg
gctatggtagagggccgccgggcagaaattgagctccaactgaaacgagaccatgtgtct
gaagatgaagccagactgaaaaagcaggtggcctggttatgggtccgcgacaccttggtg
gatgtgatcaagatcagctccagaggaaatcccacaatgcaaagcaactctatatacgcc
ctagcgggattggctgtcaccgtgaatcgccatggcaatgggctagatactgaggctgcc
aaagcagctgaggacagcagtgaattcatgagtccccctcattggcttacggttgtcata
gatacgatcatatctctgatggatgtcactttcactccaaaaggaaagctgattggtctc
tgtcaacagttgtcggtggacaatcgtttgccagcaagcctacttgcacaggcatcagct
tccgtcgccctgagtcaagtcgtaccagcactcatcacgctggatgttgacagaatcttc
atgatcatcaacttcctgctttcgtggttgccaggacaaccaggtgtcccagaatcccct
gttctacagttccatggtggacttggattggggatgttcctgtcacgacttctagaggaa
cacttcgccgacatcagtggaacaaagggtatgttacagatttggaagagctttgataaa
ttggaagagtgttgccttgcacccaatgtaaaaaacagatcgggagctatcctcggcctg
ggtatggctgtctgtgcaatgtgtgaggaaggaaagacagaaagtcgagctcacgttgtg
tctatctacgacaaactgctgaccttgtgtgatgagcttgacccccttgacaacatattc
caggcggtcagtgtgtgcgtggcctgtattgcgggagcggcatttagttctaacattctc
ctggttaccagagtggacacagcagtggacaagctgatgaccactcactcaaaccatcca
caggtaactggagtatctctggccctgggcatgctctgttacagtctcagtagggccggt
caccccgggataggggatgtgagggtcaggctgtttggtacctggatgaaagctgtctca
tctgaggggaccgcacccatggagaaggtagccatattgaacggactgatggctttgatt
ggctcagagaggacacttataccggtccagagtggctcggtcagcagcagtgacctcaac
gctgatgatgtcatcaaggtcgcatctcagattgtcaccagtggaaacgaccttggcatt
cagaacaatgcggcgtggatgctgggtcatttgtatctgtcagcatgtgctgtagcagac
acaagagctagtgtaccctctacctacggttacctgcctgagaaaagtttcctaagagct
atcgtagactttgtgtctgaggctggtaaagcaggagcagaaactgtgccgaaagaacaa
gtagaggtggccttgacctcgctacaagaggaagtggaacaggcactgccccctgtcaac
tgggcaggggtgttaactcctatgatgaggatgggttttggtgataaggttagacgtctg
agtgtaaagttggcggtaaaacagagtggatcagcccccacagcggccatgttcctcacg
acctggatgaccttgcctttgctcagcacactagacgagggatgtcagattgtcctctat
gacgccttaccaaaactgatttgctcgatcgcaccaacagccatcggctcgctcctggga
gtaggatcaagtgagccatacattggccaggacggggacacaagtccagctctagtccac
gtcctagcaggactgaccaacgctctaaaggtcaacgacccaccagaggcagtgactgct
gtcctctacaaggctgtggcaacgttctactccaaactttcatcatgtacacaggtgcca
gtactgtgtctggtagccgattgccttggtaacctgcccgacgatctgtttgacaagata
actggcgaggatttcctttacgacgcgagtcattccaaaggctgtttggttcgctgttac
ctggtggttcaagggaagcaacccatcaccattctcaacagctgtattgatgctaccttc
aataacaagagatgcaaccattctttgatatctacatacctacagcactgcttctatcag
gtgacccagagtaggtcagagttcacaggggtcattccaaagttacattggctggtagaa
ctcttgggacatgtccgtaacatagcgacaggggccacaactctgtcagacgatattaca
gacaaaacacaggtgatggatttggctgttgatataattgctgcagtcctgtgtttgtgg
atgtccacttcctccgcgtgtgttttaagtgtcactacacaattactgacttgtccagat
atatcgtcctccaacacacaagatcctaagttaccatggaaaccaagtgtgtctccaagg
caggtgttacctgcctacatcactggcatccaatcagagccctgggatcaggttcttccg
aaggttgtggactgttggaccacactgttgtcaagacctgatgacatcatcagtaggaag
accaaatcatcactacaagattccctgcagattttgagacattctaccaccttcaggaag
cccaccgtctggaccgagatttatgatactgtgcaagtgaaataa

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