Mizuhopecten yessoensis (Yesso scallop): 110443655
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Entry
110443655 CDS
T05079
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110443655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myi03021
]
110443655
03036 Chromosome and associated proteins [BR:
myi03036
]
110443655
Transcription machinery [BR:
myi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110443655
Chromosome and associated proteins [BR:
myi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
110443655
Chromatin remodeling factors
BAF complex
110443655
PBAF complex
110443655
GBAF(ncBAF) complex
110443655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
BRK
HSA
Bromodomain
QLQ
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
110443655
NCBI-ProteinID:
XP_021343682
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MMATGEDKMMPGPPPPVPGYPQQNQVQDNMQMIQKAMNQMEEKGMQEDPRYATLMAMADR
ARSGMHPPGMPSSMPQGMPGGPQHHGMQGPRSQNQGQRMATSPSPGMGGHQGMPGSSHSM
PGGPPGMSGGPGMMPGGPQGMHSGQQGMPGPGGQNMGGGQPHRMGSMGPNQGMPNGSMGM
SGSSMPNPALGGPNMTAPPSGPPNMNLPQNMPNSSSSAGPNVSQPSGLHMSGGPNMGGYN
MANQGGQGMPSSTGGSPGMGAPDMNGPIPGNSTGMGNHGSSGGPMGHSMPMEDMRAMSHG
NGHSSQGPPNPRMDQDQNQQGQQNMPPNQSSGPSRYNFSTPQLTQLRGQIMAYKLLARNQ
SIPDNVRMAIDGKRQFGSGSRPMTDSNQQQRMPQQPPQPHMPPQNMHYQGGPPQGQPGQP
AQPASQPRPQSQQTPPSAVQSMLSMQQKQSRIAPVAKPQGLDPLEILNERENRISSRISS
RIKELEYLPGIMEEDMKIKAMIEFRALRLLNFQRQLRSEVVAYMRKDTTLETALNTKAYK
RSKRQSLREARVTEKLEKQQKLEHEKRRRQKHQEYLNAVLQHAKDFKEFHRNVTAKISKL
NKAVMVHHANTEREQKKEQERLEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLHQTDEY
ITNLMSLLSDHKEDIRKKKQARKKKKKKETSDNPDNADESSNMSEPRISVIETNTGKVLS
GEDAPMSSQLESWLEMHPGYEVAPREDGEEDDDEEDEEEPEEILPPPRPALNRPQIQSVD
DLAEHEATEIIKTAEQRLDDDEYHNQVEMRNYYNVAHSIHEDVMEQASIMINGTLKNYQV
KGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLITYLMESKKINGPFLIIVPLSTLSNWL
LEIEKWAPSVITVSYKGSPLTRKALSPQLKMGKFNVLLTTYEYIIKDKSVLAKIRWKYMI
IDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCTTF
EQWFNAPFAMTGEKVELNQEETLLIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYVIKCE
MSALQRVVYRHMASRGILLTDGSEKDKKGKGGAKTMMNTIMQLRKICNHPFMFPHLEEAF
AEQLGLSTNVVQGAELYRAAGKFELLDRMFPKLKASGHRVLLFCQMTSLMSIMEDYFVYK
GYRYLRLDGTTKADDRGQLLSVFNCPDSPYFVFLLSTRAGGLGLNLQAADTVIIYDSDWN
PHQDLQAQDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNVDEKVIQAGMFDNKST
GTERRQFLTTLLLQENDEAEEEDEVPDDETINQMLARTEDEFDQYQKMDIERRREEARNP
NRKPRLMEQDELPAWIVKDEAEVERLTFEDEEDKIFGRGERQRKEVDYTDSLTEKQWLKA
IEDGNLEEVEEQVKRVPPVPEKEKKKTKKRKMMVVEDDDDKKPKKKRGRPPVEKLPPNPP
KLTKMMKKLLDVIIHYKDNDGRVLSDAFFQLPSKKELPEYYEIIIKPVDFKKIKARIRDH
KYRSIDDLESEVLTLCENAQSYNIEGSLIYEDSIVLQSVFTNARERLEKDGFNVSSDESA
SSEADDDDDNGDDDDEEVVKVQKVKLKESRKEKSGSARKQRKSRGKSRPVISDDDDDAED
EDQSEEETAPSSRSSSRVSSPAPGRRQR
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgatggctacaggggaagacaagatgatgcctggccccccaccacctgtaccaggttac
ccacagcagaaccaggtccaggacaacatgcaaatgattcagaaggcaatgaatcagatg
gaagaaaaagggatgcaagaagatccaagatatgcaacgctgatggcgatggctgacagg
gccagatctgggatgcacccaccaggaatgcctagtagtatgccccagggaatgccaggc
gggccacaacaccatggtatgcagggccctcgatcacaaaaccagggtcagaggatggct
acctccccttcaccaggcatgggaggtcatcaaggaatgccaggctcctctcacagcatg
cctggtgggccaccaggaatgtctggtggcccaggcatgatgcctggcggtccacaaggc
atgcactctggtcagcaaggtatgccaggcccagggggtcagaatatgggcggaggccag
ccacataggatgggaagcatgggaccaaaccaaggtatgcccaatgggtctatgggaatg
tctggttctagtatgcctaaccctgcgctgggaggaccaaatatgacagcacctccaagt
ggtccaccaaacatgaatttacctcaaaacatgccaaatagctccagcagtgcaggacca
aatgtcagtcagccatccggtctacacatgtctggtgggcctaatatgggtggatacaac
atggcaaaccagggaggacaagggatgcccagtagcactgggggatctcctggtatgggt
gcaccagatatgaatggaccaataccaggaaatagtactgggatgggaaaccatggtagt
tctggaggaccaatgggtcattctatgccaatggaggacatgagggcaatgagtcatggt
aacggccattcatcacagggtccacctaatcccaggatggaccaagaccaaaatcagcaa
ggccagcagaacatgccaccaaaccagagcagtggtccatcccgatacaacttctcaacc
ccccagcttactcaactcaggggacagatcatggcctacaaactgcttgcacgaaaccag
agcattccagataatgtacgaatggctattgatggaaaacgtcagttcgggagcggatca
agaccaatgactgattctaaccaacaacaaagaatgcctcagcaacctccacagcctcac
atgcctccacagaatatgcattaccaaggtgggccaccccagggacaacctggtcagcct
gcccagccagcctcacagccccgccctcagtctcagcaaacaccaccttcagctgtccag
tcgatgctttccatgcagcagaagcagagtcggattgcgcctgttgcaaaaccccagggg
ctggaccctttggagattctcaatgaaagagaaaacagaatttcatccagaatatcatca
agaataaaagagcttgaatatctaccaggaataatggaggaagatatgaaaatcaaagcc
atgattgagtttagagctctgagattactcaatttccaacgacagttgaggtcagaggtt
gtagcctatatgagaaaagacacaacgttggagacagcactgaacacaaaagcctataag
aggagcaagaggcagtcactgagggaggcacgggttacagaaaagctggagaagcagcag
aaactggagcatgaaaaacgacgcaggcagaaacatcaggaatatctaaatgctgtgcta
cagcatgccaaagactttaaagaattccaccgcaatgtgactgccaagataagcaaactg
aacaaagcagtgatggtgcaccatgctaatacagaaagggaacagaagaaggaacaagag
cgactcgagaaagagcgaatgaggagactcatggctgaagatgaagaaggttacaggaaa
ctcattgatcaaaagaaagacaagcgtcttgcctacctccttcaccagactgacgaatac
atcacaaacctcatgtctttgttatcggatcataaagaggatataagaaaaaagaaacaa
gcaaggaagaagaaaaagaagaaggaaacaagtgataatcctgataatgctgatgagagt
tctaacatgagtgaaccaagaatatctgtgatagaaaccaatactggtaaagttctgagt
ggggaagatgctccaatgtccagtcagcttgaatcctggttagagatgcatcccggatat
gaggtagccccaagagaagatggggaagaagatgatgatgaagaggacgaagaagagccg
gaagaaatattaccacctcctcgaccagccctcaacagacctcagatacagtcagtggat
gacttggctgaacacgaagcaacagaaattatcaaaacggcagaacaacgtctggacgac
gacgaataccataaccaggtggagatgaggaattactataatgtagctcactcgatccat
gaggatgtgatggaacaagccagcatcatgataaatggaacactgaaaaattaccaggtc
aaaggattggagtggatggtgtctttatataacaacaacttgaatggtatcctggccgat
gaaatgggtctgggcaagaccatccaaaccattggcttgatcacctatcttatggagtcc
aagaagattaatgggccattcctgatcattgtgccactctcaacgctgtccaactggctt
ttggaaatagaaaaatgggctccctctgtcatcactgtatcatacaaaggttctccactc
actcgaaaagccctatcaccacaactcaagatgggcaagttcaacgtgctgctaaccaca
tacgaatacatcatcaaggacaagtctgtgttagcaaagatacgatggaagtacatgatc
attgatgaaggacatcgtatgaagaaccaccattgtaaactgacacaggtgctaaacacc
cactacattgctccccaccgtctcttattgactggcacacctctacagaacaaacttcca
gagttgtgggccctgcttaacttcctgttgccaagtatcttcaagtcctgcactacattt
gagcaatggtttaatgcaccttttgctatgactggagaaaaggttgagttaaaccaggaa
gaaaccctccttatcatccgacgtttacacaaagtgctgcgtccattcttgcttcgtcgt
ctgaagaaagaggttgaatctcagctacctgacaaggttgagtatgtgatcaaatgtgag
atgtcagcactccaacgtgttgtatacagacacatggcgtccagaggcattttgttgact
gatgggtcagaaaaggacaaaaagggcaaaggaggtgcaaagacaatgatgaatactatc
atgcagttgagaaagatctgcaatcatcccttcatgttcccacatttagaggaggctttt
gcagaacaactaggcctgtcaaccaatgttgtgcaaggggcagagttgtaccgagctgcc
gggaagtttgagctgctggacaggatgttcccaaaactgaaggcttcaggccatcgagtg
ctgctcttctgtcagatgacctctctcatgagcatcatggaggactactttgtctacaaa
ggttaccgataccttcgtctcgatggtacgactaaggcagacgacagaggccagctccta
agtgtgttcaattgtcccgactccccctactttgttttcttactgagtacaagggctgga
gggctgggcttgaacctccaggctgctgatactgttatcatatacgactctgactggaat
cctcatcaggacttgcaagctcaagacagagctcacagaatcggtcagcagaatgaagta
cgtgtgctgcgtcttatgaccgtgaacagtgtggaggagaggatcctggctgctgcacga
tataagttaaatgtggacgagaaggtcatccaggctggtatgtttgacaacaagtcaaca
ggaacagagagacgccaatttttaacaacactgctcttgcaagagaatgatgaagctgag
gaggaagatgaggtacctgatgatgaaacaatcaatcagatgttggcgagaactgaggat
gaatttgatcaatatcagaaaatggatatagagagaagacgagaggaagctagaaatccc
aatagaaaaccccgactcatggaacaggatgaactgccagcctggatagtcaaggatgaa
gctgaggttgagagactgacctttgaagatgaagaagacaagatatttgggcgcggagaa
agacaaaggaaggaagtggactacaccgactctctcacagagaaacaatggctcaaggct
atagaagatggtaacttagaggaggttgaggagcaggtgaagagagttccaccagtcccg
gagaaggagaagaagaaaactaagaaacgaaagatgatggtggtggaggacgatgatgac
aagaaaccgaagaaaaagagaggacgaccaccagttgaaaagctgcccccaaacccaccc
aaactcacaaagatgatgaagaaacttcttgatgtcatcattcattacaaagacaatgat
ggaagagtcttgagtgatgccttctttcagctgccatccaaaaaagaactaccagaatac
tacgagatcataatcaaaccagttgactttaaaaagataaaggcacgtatcagggaccac
aaatacaggagtattgatgaccttgaatctgaagttcttaccctgtgtgaaaatgcacag
tcctacaacattgagggatcactgatctatgaggattcaattgtgctccagtccgtgttt
accaatgcaagagagagactggaaaaggatggatttaatgtttcttctgatgaaagtgcc
agcagtgaggcagatgatgatgatgataatggagacgatgatgacgaagaagtggtaaaa
gttcagaaagtgaagttaaaggaatcaaggaaggagaagtcaggtagtgctaggaaacaa
cgcaaatctagaggaaagtcacggcccgtaatcagtgatgatgatgacgatgcagaggat
gaggaccaatcagaagaagagactgccccaagttcacgcagttcatcaagagtttcctca
cctgctcccggtcgcagacaacgctag
DBGET
integrated database retrieval system
