Mizuhopecten yessoensis (Yesso scallop): 110445472
Help
Entry
110445472 CDS
T05079
Name
(RefSeq) deubiquitinating protein VCIP135-like
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
myi01002
]
110445472
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
myi04121
]
110445472
Enzymes [BR:
myi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110445472
Peptidases and inhibitors [BR:
myi01002
]
Cysteine peptidases
Family C64
110445472
Ubiquitin system [BR:
myi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
110445472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VCIP135_N
OTU1_UBXL
OTU
ubiquitin
DUF5817
Motif
Other DBs
NCBI-GeneID:
110445472
NCBI-ProteinID:
XP_021345797
LinkDB
All DBs
Position
Unknown
AA seq
1302 aa
AA seq
DB search
MQGLSRQRSEDGKVLCGSCPDEQCQAKLFFPAYDKSVECTGCGKRHEQTSLQNIAEVTNP
SVALHNILKNILLGNVKPKKGTDDVKVLGLSNYVCKSISPILTRYGMDKRTGKAKLLKEL
SQQDIFNCGKILGDRAFLIEEENLEVIGYGRDRSGSVRYLADILKELKIYNDQEERLVPI
HADGDGHCLVHAVSRALVGRELFWHALRLNLADHFQTNLSRYKEHFREFIDTNEWDYIIG
ECDPDFIPRDGEPLGLRNIHVFGLANVLHRPVILLDSYLGMQSSGDYSGVFLPALVEPEA
CKSRDGTLNKPLCIAWSSAGHNHYIPLVGIKGKNLPNLPRSMIQRAWGVPSDLIDKYIEF
DQSDLCRVGGNKCLSDKYIRQLVSAMDEVFVQKNGVPPQLVADVHQFLYKSSGIVGVKLE
EVIETTKTAIEEHVLYRCLTCEALIRYHLPSEWFRRGGSLYDLAVKTHKDLLTDKKYVFP
YQGVTCMYNKEKDILVPDKDTSRLKTCSFCQGDSVRLVNTDGGVQYFNGDRTLARSTSGR
CACGFKHYWDGKEYDNIPEIFPVTLQWNGKVVEEKVAWFQYETDPTMNSNVFQVSQKLVQ
KHFPGEFGSERLVQQVVDTILRNTASQETSQLEEAEGSQDVDMADDPLWSSDIPSKIILT
GYKQKTLHKEELTMSETEKNVRKQVESQAPKHQQRKTKEIAALAAKSSPKKSKSDITAKK
TENVSPSHVPMETTQATKNRQKKVRLATSDGRQVMLTLEKDLTFDDLQQMIQSSVDVPPH
RQKIRVGFPPKELKPPAESDSDQIINLQHGDKIALEVLPDPVLPAGRSKSFSAVSASPAA
SKPRLSWSHFEQDTHQASADTLLQSLKNAQEANDTLDASIASLAIMATISGKDLWTQVQS
MPHLFSVGGLFYKQVERDLGLVDGKHCQLPSLEGKVFRYNAKEGRLELCMEPYGHFQVEP
GVDRKVAQLKEQEEKITFGSSGAVKHDTKRQAAFSGEGHSLQAMNIERMPSNIQDMTTHH
HHGNHHNTVRNMQTMCSPSKHETAIPEEMVTESSTKGNNSSEEGRKYQRLGPGYSVLDPN
LADNTSQNAQFFKEIADSMEKSMQEIDQEMERIDDDEQKKQFRGTAANVIAEARPEVNVQ
PRVQLENKDIVRSSTTEQSSADLTLPDALEIEKNQEEVQTSESLNVGISDGEKPDTESES
ESKSPINECIDISASGVSETCSSQTPSTVEIPGAGALPELEEKEPEKSQEIIYDRVGDFT
VTSADTLEKDKRADSETTQDSSSTKPENVEEETKMAKSHDIV
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtttgtctagacagaggagtgaggatggcaaggttctctgtggatcttgtcca
gatgagcagtgtcaagccaaattgttttttcctgcctatgacaagagtgtggaatgcaca
ggctgtggaaaacgacatgagcagacatcgctacaaaacatcgctgaagtcactaatcct
agcgtagcattacacaacatcttaaaaaacatcctcctgggaaatgtgaagcctaagaaa
ggaactgatgatgtcaaagttcttggcctgtcaaattatgtttgtaaatctatttctcca
attctgacacgatatggaatggacaagagaacagggaaggcaaaacttctcaaagaactt
tcacagcaagacattttcaattgtggaaagattctcggtgatcgtgctttcctcattgag
gaggagaacttggaggtgattgggtacggaagagatcgatctggaagtgtaagatactta
gcagacattctaaaagaactaaaaatctacaatgaccaggaagaacgtcttgtccctata
cacgccgatggagatggacattgccttgttcatgctgtttcccgagcgttggtcggcagg
gaattgttctggcatgctctacgactgaatttagctgaccatttccagacaaatttatcc
cggtacaaggaacattttagagaattcatagacaccaatgagtgggattatatcattgga
gaatgtgatccagactttattccccgtgacggagaaccattgggtcttagaaacattcat
gtgtttggtctggccaacgttctccataggcctgtcatactcttggattcctaccttggc
atgcagagctcaggagactattctggtgtttttttgcccgcccttgttgagccagaagcc
tgcaagagtcgagatggtacactcaacaaaccactgtgtattgcctggagcagtgctgga
cacaaccattacattcctctcgtaggaatcaaaggaaagaatctgccgaacttacctcga
tctatgatccaacgagcttggggagttccttccgatttgattgataagtacatagagttt
gaccaatcagacctttgcagagtaggagggaacaagtgtttgtcagacaagtacattcgt
cagctggtgtcggccatggacgaagtgtttgtacagaagaatggcgtgcctcctcagctt
gtggctgacgtacaccagttcctgtacaagtcttcaggtattgtcggggttaaactggaa
gaagtgatagaaacaacaaaaactgccatagaggagcatgttctgtaccgatgtctcacc
tgtgaggccctgatcaggtatcatcttccctcggagtggttccggcgcgggggcagtctg
tatgaccttgcagttaagacgcacaaggatctactaacggacaagaaatacgtcttccca
tatcaaggggtgacatgcatgtacaacaaagaaaaagacattctggtcccagataaagac
acttcaaggttgaagacatgctccttttgccaaggtgacagcgtgcgtctggtcaatacc
gatgggggtgtgcagtactttaacggcgaccgtacattggcccggtctacatctggcagg
tgtgcctgcggcttcaaacactactgggacggcaaggaatacgacaacattccagagata
ttccctgtgaccctacagtggaacggtaaagtggtcgaggagaaagtggcctggttccag
tatgagacagacccgaccatgaacagtaacgtgttccaagtatcacaaaaactagtccag
aaacattttccaggtgaatttggtagtgaacgacttgtccaacaggtagtcgacaccatc
ttacgcaacactgccagtcaggagaccagtcaactggaggaagccgagggatcacaggat
gttgacatggctgatgaccctctgtggtcatctgatataccctctaaaatcatactgacc
ggttataagcaaaaaaccctacacaaagaggagttgaccatgagtgagacggagaaaaat
gttcgtaagcaagtggagagtcaggctccgaaacatcaacagagaaagacaaaggagatt
gctgccctagccgccaagtccagtccaaaaaagtcaaaatctgatatcactgcgaagaaa
acagaaaatgtcagcccttctcatgttccgatggaaactacacaagcaacgaagaatagg
cagaaaaaggttcgcttggcaacttctgatggaagacaggtcatgttgaccctagagaag
gatttgacttttgatgaccttcaacaaatgattcaatcatctgttgatgtccctccccac
cgacagaaaatcagggttgggtttccaccgaaggagcttaagcctccggctgaatcagat
tcagatcaaattatcaaccttcaacacggagacaagattgctctagaggtgctgcctgac
cctgtgttacctgcgggaaggtcaaagtcgttcagtgctgtgtccgcctcgcctgcagca
agcaagccgcggttgagttggagccactttgaacaggacacccaccaagcctcggccgat
accctcctacagagtctaaagaatgcacaggaagctaatgacactttagatgccagtatt
gcgtcgctcgcgatcatggcaaccatttctggcaaggatctttggacccaggtacagagc
atgcctcatctgttctctgttgggggtctattctacaaacaggtagagcgtgatctcgga
ctggtggatggtaaacactgccagcttccgtctctcgaaggaaaggttttccgttataat
gccaaagaagggagacttgagctctgcatggaaccttatggccatttccaggtagaacct
ggcgttgatagaaaagtggcacagctgaaggaacaggaagagaagataacattcggaagc
agtggagctgttaaacatgacactaaaagacaggcggccttttctggtgagggacattcc
ttacaggccatgaatattgaacgaatgcctagcaacattcaagacatgactacccatcat
caccatggcaaccatcacaatactgtcagaaatatgcagacaatgtgtagtcctagcaaa
catgaaactgctatacctgaagaaatggttacggagagctctacgaaggggaataactct
agtgaagaagggaggaagtaccagagacttgggccaggctacagtgttctcgaccccaat
cttgctgacaacaccagtcagaatgcccagtttttcaaggaaattgcagatagtatggaa
aaatccatgcaggagattgatcaagagatggaacgtattgatgatgacgaacagaagaag
cagtttcgtggcacagctgcaaatgtgattgctgaagcacgacccgaagtcaacgtccag
cctcgtgtgcaacttgaaaataaggacatagttaggtcgtctacgacagaacagtcgtcg
gctgacttgacgcttcctgatgctttagagattgagaagaatcaagaagaagttcaaacg
tcagaaagtttaaatgttggaatttcagatggagaaaaaccagacactgaaagtgaaagt
gaaagtaaaagtcctattaacgaatgtattgatattagtgcttctggggtttcagaaact
tgttcttctcaaacaccttctaccgtggaaattcctggtgctggtgccttgccagaacta
gaggaaaaggaaccagagaaatcccaagagataatatatgacagagtcggggatttcaca
gtaacaagtgcggacaccctggaaaaagacaaaagagcggatagtgaaacgacacaggac
agctcttcaacaaaaccagaaaatgttgaagaggaaacaaaaatggccaagtctcatgac
attgtatag
DBGET
integrated database retrieval system
