Mizuhopecten yessoensis (Yesso scallop): 110446008
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Entry
110446008 CDS
T05079
Name
(RefSeq) zinc finger CCHC domain-containing protein 7-like
KO
K12597
protein AIR1/2
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110446008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110446008
03016 Transfer RNA biogenesis [BR:
myi03016
]
110446008
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
110446008
Transfer RNA biogenesis [BR:
myi03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
110446008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
110446008
NCBI-ProteinID:
XP_021346613
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MFCAADECRFYDGSDSSNDDDDGENSDTDREEIESALYAQIHFHHEEDGNLSYKGYSTSV
QTLGSESTQIIHDDSLNTPSTATPSGSATTSLLSPPSTNNCVVSLSSGEDSVYVVSDQDD
VDLTDSECMILDEPLSDTGDILVHVESYQQPILQAAQMTASKENDVCKISEMDQLVTTNN
PGLKRYYNPITVRCHNCKEMGHISNACPKPKKSEICHLCGMTDHFFRKCPKGICYNCEGP
GHNSRDCPEQRKPRRQTCFRCLMPGHSKNTCPDIWRQFHVTTSVGPVQKMEMKANPKRFC
CNCASRKHFGFECVEDRMEWHEHGNYPFISTYTYREQSLTRDKKPEKNHPQTEKKITNGS
RNWDNMATIGACKGTKRKYREEWDQHIETGQGKRRKKPNYCRDDDTQTQPKSQKKRKKQG
NRNSDNMGTRVRGEKEHYMQSGQGKHRPAQNKFSKGKECVVKTGWQAYNPPHKRDKTHNF
DRGFKTSYYQNKIPYQHNKKTRSSTA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgttctgtgcagcagatgagtgccgtttctatgacggcagtgatagtagcaatgatgat
gatgatggcgaaaactctgatacggacagagaagaaatagagtcagcattgtatgcacag
attcactttcaccatgaggaggatgggaacctgtcctataaaggttactccacatctgtt
caaactctgggcagtgagtcgactcaaattatacacgatgacagtctgaacacaccatct
acagccacaccctctggatcagctacaacatccctactgtcaccaccatcaaccaacaac
tgtgtagtgtctctttcctccggcgaggatagtgtgtatgtggtgtctgatcaagatgac
gttgacttgactgatagtgagtgtatgattttggacgaacctctgtccgacacaggagac
atactggtgcatgtagagagttaccaacaacccattctacaagcagcacagatgactgcc
agtaaagaaaatgatgtctgcaagatctcggaaatggaccagttggtaacaactaacaat
cctggtctgaagcgttactacaaccccataactgtacggtgtcacaactgtaaggagatg
ggacacatatcaaacgcttgtcccaaacctaagaaatcagagatttgtcacctgtgtgga
atgactgaccatttcttccgtaagtgtcctaaggggatatgttataactgtgagggcccg
gggcacaactcccgtgattgtcctgaacaacgtaagccacggaggcagacatgtttccgc
tgcctcatgcctggtcactcaaagaatacctgtccagacatttggagacagttccatgtg
acaaccagtgttggaccagtgcagaaaatggaaatgaaggcaaatcctaaaagattttgt
tgtaattgtgcctccaggaaacacttcggctttgaatgtgtagaagatcggatggaatgg
catgaacatggaaattatccatttatatctacttacacatacagggaacaaagtctcacc
agagataagaaaccagagaaaaatcatccacaaacagagaaaaaaattactaatggaagc
agaaattgggacaatatggcaaccataggggcatgtaaaggcacaaagcggaaataccgg
gaggagtgggatcaacacatagagacaggccaagggaagcgcaggaaaaaacccaactat
tgtagagatgatgatacacagacacaaccaaaatcacagaagaagaggaagaagcaggga
aatagaaattcagacaatatgggcaccagggttagaggggagaaggaacactacatgcag
tcaggccaagggaaacacagaccagcacaaaacaaatttagcaaagggaaggagtgtgtg
gtgaaaactggttggcaggcttacaaccctccacacaaaagggataaaacacacaacttt
gatagaggattcaaaacttcttactaccaaaacaagataccttatcaacataacaagaaa
acaagatcaagtaccgcttaa
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