Mizuhopecten yessoensis (Yesso scallop): 110446094
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Entry
110446094 CDS
T05079
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
myi03036
]
110446094
Enzymes [BR:
myi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110446094
Chromosome and associated proteins [BR:
myi03036
]
Eukaryotic type
Meiosis-specific proteins
Others
110446094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
HHH_5
Motif
Other DBs
NCBI-GeneID:
110446094
NCBI-ProteinID:
XP_021346732
LinkDB
All DBs
Position
Unknown
AA seq
1805 aa
AA seq
DB search
MDLSQLFYQPNYNLSQKRPQLSQAPSTRSQYIDIPEAPVASEAPLLPSVFQDSFDFQPSQ
LFQHSSKDIQKNKNQQNFHDDKSIGSKISKIFKTPSITRVDSFHSFASITPLKSSVRHDT
EVGSDEDLFDSRTDTLPVVSVKDKLFTPAPLILPAPSCDGFALKPVEELPVKYRTIFKAF
PYFNIVQSKVFDDVFYTDKPLVVCAPTGSGKTVIFELAVVRLIMKMESVVVRGFKIVYMA
PIKALCSERLQDWTDKFESFGLKCKELTGDTEIDNYYELQEVNVILTTPEKWDSMTRRWR
DNKCIVQSVCLFLIDEIHVLNDNVRGATIEAVISRMKTVQVSLSHSNTEQPLPKLRFIAV
SATIPNIEDIAEWMGENHQAATFYKMDESCRPVRLRKVVLGYPFDEQKGSGFHFDMSLSY
KLGGIINTYSDGKPALVFCSTRKGTQQAADILAKDSRSTFIKDVKNRQILLKYSNLVKDA
KLRDTLIKGIGVHHAGMDIQDRKYMEELFASSQLQVLVATSTLAMGVNLPAHLVILKATQ
HYNMGMLEEYSNTQVLQMIGRAGRPQFDTTATAVIMTKTQSKLKYESLLNGTQMIESSLH
KHLIEHLNAEIVLQTISDMAIAMEWIRHTYLYIRVMKNPKHYGMPVGLTRDQTETKLQEL
CMRNLNQLAGIQMIKMNGDTFDIQSTEAGRLMARYCIAFETMKKFCGVTGEESISDLLGI
VSGSEEFMEVQLRVNEKKTLNTLNKDKNRQTIRYQLQGKIKTKQMKVNCLIQAQLGCLLV
QDFALQQDITRIFRAAQRLSRCLMEVLWIRDDYKAFLSAAQLCKAIKAKLWENSKHVAKQ
LERIGPALSTALVNAGITSFQKIEETNPRDLELIVNRHPPFGNQVRDSVTYLPKYELTME
QVSRYNSGTAEILLHLNIANQTSLLNKKTASLFHTCILLVANSDNKIIFRRKLMDSYLQK
ESGFTKKLDVQRAATGSELYIHLISQDWVGLDVETTYSPYYLGATRISNVPSKVDGSNQQ
QSGGRYTGVQTTSDGLRPCNHRCYNKSLCGHKCCNSMTEAKPKLPATPRIPMLSKPKTGS
ICNYISGLKNKLTMLPDTPSAKRIKISSINNKSINMDQFAYTPKRPETMVMSDEGYSTHE
TIDQFNSDGSSDEICKSTSTTPGRPQTSKFYDRDCTVMSSEAGDCGQGKQQEGLTKPQYN
EWAQLDLYQKHREEYKEDAENSHQEDDYDFPELNVSNSYSPQVQTTNRSQYQMAEQYGNF
GISSSLFPSKIPSPHRMDYHPQTHTDGTLSYSCIDDWDDDNANFQNSGDGLSSAFDTHRA
SLSFSVDKPRTSVLHGTPSSSTKKRKYPQHCDDDDVIEISEGELSLQDKTNSSTPHRFGQ
VVAWSNSQRKANESCPVTPNQQKNWVMFNQQGNEASPNGSKSEEDHWSGSDNELLMLDAS
TNNDRIRKTTDGKKSNPGAVLTSPRSDLDSFPQLVRPKTFLNNKNRYTGTSNSKPRQGGQ
ANSYCSNFQSSCMQESVKNNNGKRDQSLLRKSQSNSGVQENSYSNNYRQKYIQSNGSSRG
NLLTNSSSSGNFQTNSLGQGNIQTNSSRQGNIQTNSSSGGIVQGNSSSGGIVQGNSSSGG
IVQGNSSSGGIVQGNSSSGGIVQGNSSSGGIVQGNSSSGGIVQGNSSSGGIVQGNSSSRG
NVKNNIPTHENIHCNEHNHEHEGFQKSHPYKSSVQRSRLQNNVLKPVWELSQSKTQQLEQ
KMADCQSFPVSDQSNLCAISSDCQGLTTKPVPPPAFKTASFFTIDDQSISDSPQETFSSI
FDGIF
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atggatcttagccagctgttctaccaaccaaactataatctgtcgcagaaaaggcctcag
ctctcacaagcaccatccactagatcccagtatattgatatccccgaggctcctgtagca
agtgaggctccattgttgccctctgtctttcaagattcatttgattttcagccctcgcaa
ctctttcagcattcatcgaaagatattcagaagaataaaaaccaacaaaacttccatgac
gataaaagcatcggatcaaagataagtaaaatcttcaagaccccatcaataaccagagtg
gacagctttcacagttttgccagcatcactccactgaagagcagtgtgaggcatgataca
gaagttgggagcgatgaggacttgtttgactccagaactgacactcttcctgtggtatca
gtaaaagacaaactatttacaccagctccactgatcttacccgctccaagctgtgatggt
ttcgcgctaaaaccagttgaagagctgcctgtcaaatacaggaccatattcaaggcattc
ccttatttcaacattgtacagtctaaagtgtttgatgatgttttctacactgacaagccc
cttgtggtgtgtgctcccacaggatctggtaagacagtcatatttgagctggccgttgtt
agacttatcatgaagatggagagtgttgtggtgagaggcttcaagattgtctatatggct
cccatcaaggccttatgcagtgagagattacaggactggacggacaagtttgagtcattt
ggcctgaagtgtaaagaactaactggtgatacagaaatagataattattatgagctgcag
gaagtgaatgtgatcctcacaacccctgagaaatgggacagcatgacacgacgctggcgg
gacaacaaatgtattgtccagtcagtgtgcctcttccttatagatgagatccatgttctg
aatgacaatgtgcggggagcgacaatagaggctgtgatcagcaggatgaagactgtacag
gtctccctatctcactctaacactgagcaacccctacccaaactccgtttcatagctgtg
tctgccaccatacccaatatcgaggatattgcagagtggatgggtgagaaccatcaagca
gcaacattttacaagatggatgagagttgtcggccagtgcgacttaggaaggtggtgctt
gggtacccgtttgatgaacagaaaggctctgggttccactttgacatgtcactcagttac
aagcttggtgggatcatcaacacttactcagatggaaaacctgcactggtgttctgttcc
acaaggaaaggtactcaacaggctgctgacattctggccaaagacagtagaagtaccttt
atcaaggatgttaaaaacagacagattttgctgaaatactccaatctggtaaaggatgct
aaactcagagacacattgataaagggtattggtgttcaccatgctgggatggatattcaa
gatagaaaatacatggaggagctgtttgcttcatctcaactacaagttttggttgctaca
agcactctggccatgggtgtgaacctccctgcccacctggtgatccttaaggccactcag
cactacaatatgggcatgctagaggaatactccaacactcaagttctacagatgattgga
cgagctggacgaccacagtttgatactactgcaactgctgttattatgacaaagacacaa
agcaagctgaagtatgaatctttgctgaatggaacacagatgattgagagcagcctacac
aagcacctgatagagcacctgaatgctgagattgtgctgcaaaccatcagtgacatggcc
atcgcgatggagtggatacgacacacctacctctacatcagggtgatgaagaaccccaaa
cactacggaatgccagttggcctcacaagagatcaaacagagacaaaacttcaagaactt
tgtatgaggaatctgaatcaattggctggtatccagatgataaaaatgaatggagacaca
tttgacattcagtctacagaggctgggagactgatggcaagatattgcatcgcctttgag
acaatgaagaagttctgtggtgttacaggagaggagagcatcagcgacctgttggggatt
gtatctgggagtgaggagttcatggaggtccaactgagagtgaatgaaaagaagacgctg
aacactcttaacaaagacaagaatagacaaaccatcaggtatcagttgcaaggaaagatc
aagacgaagcaaatgaaagtcaattgcctcatacaagcacagttgggctgccttctggtt
caagattttgctttacaacaggacatcaccaggatattcagagctgcacagagactttct
agatgtctgatggaggtgctgtggatacgggatgattataaggcattcctgagtgctgca
cagctgtgtaaagccatcaaagccaagctttgggagaactccaaacatgtagccaaacag
ctagagaggataggtccagcactatctacagctcttgtcaatgctgggatcaccagcttc
caaaagatcgaggaaaccaatccacgagatctagaactgattgtcaacagacatcctcct
tttggtaaccaggtacgagattcagtcacctatcttcctaaatatgaactgactatggag
caggtgtcacgatacaacagtggtactgcagagattctgctacacctcaacattgcaaac
cagacaagcctactaaataagaagaccgcctccctgttccatacctgtatacttctggtt
gctaacagtgacaacaagatcatcttcagacgcaaacttatggactcgtatttacagaag
gaatcaggcttcactaaaaagttggatgttcagagggctgctacagggtccgagttatac
atccacctcatcagtcaggactgggtcgggctggatgtggagaccacctattcaccttac
tatcttggggccacaaggatttccaatgtaccatcgaaggttgatggcagcaatcagcaa
cagtcaggtggcagatatacaggtgtgcaaacaacatctgatggtctccggccctgtaat
catcgctgctacaataagtctctgtgtgggcacaagtgttgtaactccatgaccgaggca
aagcctaagctccctgcgacccccaggatccctatgctatccaagcccaagactggaagc
atatgtaattacatatctggcctcaaaaataaactgaccatgctaccggatactcccagt
gccaaaaggataaagataagcagtataaacaacaagtctatcaacatggatcagtttgca
tacacaccaaagagaccggagactatggtaatgtcagatgaaggttacagcacccatgaa
acaattgaccagtttaacagcgacggttcatcagatgagatttgtaaatctactagtacc
acaccaggaaggccccagacctccaagttttatgacagagattgcacagttatgtcctct
gaggctggagattgtggacaaggcaagcagcaggaaggtctgaccaaaccccagtacaac
gaatgggcacagctagacctataccagaaacacagagaggaatacaaggaagatgctgag
aactcccatcaagaggatgactacgactttccggaattgaatgttagcaactcatactca
cctcaagtacaaaccaccaatcgatcacagtaccagatggcagaacagtatggaaatttc
ggtatcagttcaagtctgttcccatctaaaatcccaagtcctcacagaatggactaccac
cctcaaacacatacagatggaaccttgtcctacagttgtattgacgactgggacgatgat
aatgcaaactttcaaaactcgggagatggactctctagtgcctttgatacacacagagca
agtttgtccttcagtgttgataaaccaaggacttcagtcttgcatggcactcccagcagc
agtacgaaaaaaagaaaatatccacagcattgtgatgatgatgatgtgatagagatttca
gaaggagagttgtctcttcaagataaaaccaactcatcgacaccacacagatttggacaa
gtggtagcttggtcaaactcgcaaaggaaggccaatgagagctgtcctgtgacacccaac
caacagaaaaattgggttatgtttaaccaacaggggaatgaggcatcaccaaatggatca
aagagtgaggaggatcactggagtggtagtgacaacgaactcctgatgttagatgcctcc
accaacaatgacagaatcagaaagacaactgacggcaagaaaagtaatcctggagcagta
ttgacatctccaaggtctgacttagactcatttccacagctggtcagacctaagaccttt
ttaaacaacaaaaataggtacacagggacatccaactccaaacccagacaaggcggccaa
gctaacagctattgcagtaatttccaaagtagttgtatgcaagaaagtgttaaaaacaac
aatggaaaaagagaccaaagtttgctaagaaaatcccaaagcaacagtggcgtacaagaa
aatagctatagtaacaattacagacaaaaatacatccaaagcaatggttctagtaggggc
aacctcttaactaacagttctagtagtggcaacttccaaactaacagtttagggcaagga
aacatccaaaccaacagttctaggcagggaaacatccaaaccaacagttctagtggagga
atcgtccagggcaacagttctagtggaggaatcgtccagggcaacagttctagtggagga
atcgtccagggcaacagttctagtggaggaatcgtccagggcaacagttctagtggagga
atcgtccagggcaacagttctagtggaggaatcgtccagggcaacagttctagtggagga
atcgtccagggcaacagttctagtggaggaatcgtccagggcaacagttctagtcgaggg
aatgtcaaaaataacatacctacacatgaaaatatccattgcaatgaacataaccatgag
catgaaggttttcagaaaagccatccctataagagttcagtgcaaagaagtcggctccaa
aacaatgttttaaaacctgtttgggaactgtcccagagtaagacccaacaactggaacag
aagatggcagattgtcaatcattccccgtatcagatcagtcaaatctatgtgctataagc
tctgactgccaaggactgactactaagcctgtccctccacctgcattcaaaacagcctct
ttctttactatagatgatcagtcaatttctgattcaccacaggagacatttagcagtatc
tttgacggtattttctga
DBGET
integrated database retrieval system
