KEGG   Mizuhopecten yessoensis (Yesso scallop): 110446981
Entry
110446981         CDS       T05079                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:myi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110446981
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:myi03021]
    110446981
   03036 Chromosome and associated proteins [BR:myi03036]
    110446981
Transcription machinery [BR:myi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     110446981
   Coactivators
    SAGA/TFTC/STAGA complex
     110446981
Chromosome and associated proteins [BR:myi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     110446981
    STAGA complex
     110446981
    TFTC complex
     110446981
    SAGA complex
     110446981
    SLIK complex
     110446981
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd TFIID_NTD2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_SCAP NBCH_WD40 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_IP5PC_F WD40_like WDR54 WD_LRWD1 DUF7165 Mala_s_1-like
Other DBs
NCBI-GeneID: 110446981
NCBI-ProteinID: XP_021348014
LinkDB
Position
Unknown
AA seq 605 aa
MKRIRYEQIHSSVHQYLKRRQYSDHEVIEKKEHRWVHDVKDMALKSSASGETTTENILLY
SSISGDTTVCEQQFSRLKTYLNEAIDPYKDELTTIVYPLFVHIYLQLMYNGHKAPAHKFY
SRHVKLFENPDELVVMEALNKLYTRTEVISCKEAMEFREHKYKVCLSQEALDYLMKYLKV
DDNMMLLQIFNQHLKVEVLKEDQHVLDLKESASDKHESGASEKKRPTDIVRLLQQCIKQV
REGPPCMSSICFYTFLNAYQGLCTVDISPDRTLLSAGFEDSTVKLWSITPGLIQSTKTTT
DPSKLYLSADFWTSESSCEDEEDEEAETEQNKEEKKPLYREVATLRGHNGSVYKTSFCAN
SKALLSCSEDGSVRLWDMKTHTNKVCYRGHNYPVWDIDTSSTGNYFASASKDCTAKLWET
DRTFPLRSFIGHSYDVDCVKFHPNSNYLATGSSDRTVRLWSLQDGKSVRLMQGHRSSVLA
LAFSPNGQYLASAGDDRRIRVWDLTSGNMFKELKGHTDTIHCLTFNRDSTLLASGGLDCC
IKIWDIRKGVSMSSSNNNSNSNNNNNNPPDANISPEQLGSFPTKSAIVAYLKFAQHNLLY
AAGSI
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgaagcgcatacgttacgagcaaatacactcgtctgtacaccagtatcttaagaggaga
cagtattcggaccatgaagtgattgagaagaaggagcacagatgggtacatgatgtaaag
gacatggctctaaagagttcagcttcaggggagacaacaacggagaatatcttgttgtat
agcagcatatcaggggacacaactgtttgtgagcaacagttttcacgattgaagacatac
ctaaacgaggccattgacccttacaaggatgagctgacaacgatagtataccccctgttt
gtacatatttacctccagcttatgtacaatggacacaaggcaccagcacacaaattctac
agtcgccatgtgaagctgtttgaaaaccctgatgagctggtcgtgatggaggctctaaac
aaactgtacacgcgtacagaggtcatcagttgtaaggaggccatggagttcagagaacac
aagtataaagtatgtctgtcacaagaggctttggactacctgatgaaatatctcaaggtt
gatgataatatgatgctattacaaattttcaatcagcatttgaaagtggaagtattaaag
gaggaccaacatgttctcgacctgaaggagagcgcgagcgacaaacatgagtctggggca
agcgagaagaaacgccccacagatattgtcaggctgctacaacaatgtatcaaacaagta
cgcgaaggaccaccctgtatgtcttcaatatgtttctacaccttcctcaacgcctatcag
gggctatgtacggtggacatatcgccagacaggacacttctgagtgctgggtttgaggac
tccaccgtaaagctgtggagcatcactccaggtctgatacagtctaccaaaacaacgaca
gatccatccaagctctacctgtctgccgacttctggacctcagagtcctcgtgtgaggac
gaggaggatgaggaggctgagactgagcagaacaaggaagaaaagaagcccctgtaccgt
gaggtggcgacactgagaggtcacaacggttctgtttacaagacatccttctgtgctaac
tctaaagctttactctcgtgttcagaagatggatcagtacgtctttgggacatgaagact
cataccaacaaagtgtgctatagaggtcacaattaccctgtgtgggacatagacactagt
tcaactgggaattatttcgcctcggcatccaaggactgcacagcgaaattatgggagacg
gaccggacttttccattgaggtcattcattggtcactcatatgatgtggattgtgtcaag
tttcatcccaactctaactacctggcgacggggtccagtgaccggactgtccgactgtgg
agtctccaggatgggaagtccgtccgtctgatgcagggacaccggagctcggtccttgcc
ctagctttctcacccaatggacagtacctggcctccgctggtgatgatcgtaggattcgg
gtctgggatctcacctccggaaacatgttcaaggaactgaaaggccacacagataccata
cactgcctcaccttcaacagagacagcaccctgttagcatcaggtggccttgactgttgt
ataaagatctgggacatcagaaagggcgtcagtatgagcagcagcaacaacaacagcaac
agcaacaacaacaacaacaacccaccagatgcaaatatttcaccagaacagttaggatcg
tttccaacgaaatccgcaatagtggcatatttaaagtttgcccaacacaatctcctgtac
gctgcaggcagcatttga

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