Mizuhopecten yessoensis (Yesso scallop): 110447469
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Entry
110447469 CDS
T05079
Name
(RefSeq) exosome complex component RRP46-like isoform X1
KO
K12590
exosome complex component RRP46
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110447469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110447469
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110447469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
sCache_3_3
Motif
Other DBs
NCBI-GeneID:
110447469
NCBI-ProteinID:
XP_021348866
LinkDB
All DBs
Position
Unknown
AA seq
227 aa
AA seq
DB search
MCIKAVIIMEIPRSSGFQLRHMMCEFGQLSRPDGDVTVFQGDTSVTTAVYGPGEVRMNKE
ILNKATVETVFKPKSGLPGCAEKMFERTLRNTCETFLLAALHPRSSISIIVQEIQDSGSF
LSCCVNSCCLALLDASVAMKFLVAAVTCAIDSEECIILDPTVKQEKDSCAVLTFVFENKD
DSILAVYTTGSYTVQQFQQCSQTCGEASKAVFDFYRTSIEKKLSKAT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtgtataaaagctgtgatcatcatggagattccaagaagtagtggttttcagctacgc
cacatgatgtgcgagtttggacagctatcacgccctgatggtgatgtgactgtgtttcaa
ggggacacgtcggttacaactgctgtttatggaccaggagaggtgcgcatgaataaagaa
atcctcaataaggccacagtggagactgttttcaaacccaaatcaggactgcctggatgt
gcggagaagatgtttgaaaggactctcagaaacacatgtgaaactttccttttagcagca
ctacatcccagatcatccataagtatcattgttcaggaaattcaggactcaggttctttt
ctatcatgttgtgtaaactcatgttgtttagcactgttagacgcaagtgttgctatgaag
ttcctagttgcagccgtaacctgtgctatagacagtgaagaatgtattatcctggaccca
acagttaagcaagagaaagacagctgtgctgtcctcaccttcgtgtttgagaataaagac
gattccatactggcagtgtataccacaggtagctacacagtccaacagttccagcagtgt
tcacagacttgcggagaggccagcaaagcagtatttgacttctacagaacttccatagaa
aagaaactttccaaggctacctag
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