Mizuhopecten yessoensis (Yesso scallop): 110447540
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Entry
110447540 CDS
T05079
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi04382
Cornified envelope formation
myi04512
ECM-receptor interaction
myi04518
Integrin signaling
myi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110447540
04518 Integrin signaling
110447540
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110447540
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110447540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
myi04147
]
110447540
00536 Glycosaminoglycan binding proteins [BR:
myi00536
]
110447540
Exosome [BR:
myi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
110447540
Glycosaminoglycan binding proteins [BR:
myi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110447540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pentapeptide_2
Motif
Other DBs
NCBI-GeneID:
110447540
NCBI-ProteinID:
XP_021348986
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MMKSLYTLLPITILLFLQKAHGQGEFFGNIRPVSRFNGFFGQRFRAASNIPQNGQQQQQP
TTQPQQQQQQQQQQQQQQQPQSTNNAATSTTGASTASNNPQLPSNTQAIPRQVGTVTVPI
IGPFPSDSVQQTPTEMFGMGQQGPFNRMGQPMLPSQDMSPFGAPGGFNPMLARRQQQMQQ
MQQMQQMQMQQMQQQRQQQQQQSMLPFDQQQRMSSFPSQFGSSPQRGNQQVTIPEQTQNI
NFPRTLPPEVRREMQRAGIGRMTGVSPRFGEIKPLPEITEVIEANRPGQTTNAGTQPARP
TPQQLPPQQQQQPQRPQQPQQPQQQLPMQGSSTTFNAPGRQVTTSQQATRTQSPPMPSQV
PGSFGQGRMPPQMIPPMFRGNMQGPMAGPMRGPMGGPMGGPMGGPMGGPMGGPMGGPMGG
PMGMPTGGPMGSQMGRPMFPDATQAIPDSTGQQQPQPQQPQQQPQPQQPQQQPQPQQQQN
GQQTPPASTQWSQNQPQQLPTQPQTMQGMQQMGMPNMGGMFPMGMSNMPMMRMPNMGMPN
MGIPNMGMPNMGMQNMGMPQNGQTGIPQMRPQPGQQPSANRQRFGGFSAMSGLGNQGGNM
PTNSAPQPSGQPSGQSTNQITNPSMPQNSMPNGINSGISGRFPMPNMFQNNMVGRPGRMQ
GGMQGMQGGMQGRMQGMQGGMEGMQGGMQGMQGGMQGMQGGLQGMQGGMQGMPRILPGMS
GGMPGMSGGMSGMPNGISGRFQGMPRRMPGMQTGPPQQGAGSVQQPDPSIPSLPANMPVP
DLPGSNQSPLPTSLPSQSTPAPTASIPSLGDQSRPIPSFQGIQPLPGAFPGAFPGAFHLP
PVALPPITAVDPPAMPGPMEVPGPIELSGPMDLPGSFELPSPLDLSAPLELSGFPAPSSQ
GLPNPFSLPAGKPENKSTLPGADLSPEKVPPFPGLNLPGSSPSGPRGSAGIPISMRGRAG
FPIDATGPLPPPQDVNAGEPVSNITPPPPSSSDFSANALPGPDAMLGIGGAPPGFSPLDL
SGFPGLDTSAPFPSLDSTASFPSSDSLPIGGSVASPSSSSISNTDIFNASPVDPFPFNTA
GTVFSDTGSIGIIPTDTGSVPSEPIPDPAIATQVPVPQDVFQPGPTDVLQNPTEGIPIQD
APIPQLPPQVATDNNKVAETQDPFPGLNFPSGPSLLGNPSSKTDIVNPPDAMIPLTEIPR
PSDAIIQGLPVFSR
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatccctttatacactgctgcctatcacgatattactctttctacaaaaagca
catggccagggggagtttttcggaaacatcagacccgtaagtagatttaatggctttttt
ggacagagatttcgtgcagcatcaaatatcccacaaaatggacaacagcaacaacaaccc
acaactcaaccacaacaacaacaacaacaacaacaacaacaacagcaacaacaacaacca
cagtctacaaataatgcagcaacatcaacgaccggggcttcgacagcgtctaacaatccc
cagttaccatcaaatacccaggctatccccagacaagttgggacagtaacggtccccatc
ataggtccctttccatccgacagtgtgcagcagacaccaacagaaatgtttggcatggga
cagcaaggtcctttcaatcgcatgggacaacccatgttaccttcccaggatatgtcccct
ttcggagcgcctggtggcttcaatccaatgctcgcaagacgacaacagcagatgcagcag
atgcaacagatgcagcagatgcagatgcagcagatgcagcaacaaagacagcagcagcag
caacaatccatgttgccgttcgaccaacaacaacgcatgtcctcatttccatctcagttt
gggtcgtcccctcaaagaggaaatcagcaggtcacaattcccgagcaaacacaaaatatc
aactttcctcggacacttcctccagaggttaggagggagatgcagagggctggaattggg
agaatgacaggtgtgtctccgagatttggtgaaatcaaacccctacccgagattacagag
gttattgaagctaaccggcctggacagacaaccaatgccggaacacaaccagcgagaccc
acccctcaacaactaccaccccaacaacaacaacaacctcaacgaccacagcagcctcag
cagcctcagcagcagcttccaatgcaaggctcatcaaccacatttaatgcaccaggccgg
caggttacaacatcccagcaagccacacgcacccagagcccgccaatgccatcccaggtg
ccaggatcattcggacaaggaagaatgccaccacagatgatccctcctatgtttagaggc
aatatgcaaggtccaatggcagggccaatgagagggcctatgggagggcctatgggaggg
cctatgggaggacctatgggagggcctatgggaggacctatgggagggcctatgggagga
cctatgggaatgccaacaggaggtccaatgggaagtcaaatgggaagaccaatgtttcca
gatgcaactcaggccataccagattcaacagggcagcagcaacctcagccgcagcagccg
cagcagcaaccccagccgcagcagccgcagcagcaaccccagccgcagcaacaacaaaat
ggccagcaaactcctccagctagtacacaatggtctcaaaatcagccacagcagcttcca
acccaaccacaaacaatgcagggaatgcaacaaatgggaatgccaaatatgggcggtatg
tttccgatgggcatgtcaaatatgccaatgatgagaatgccaaatatgggaatgccgaat
atgggtataccaaatatgggaatgcctaacatgggtatgcaaaatatgggcatgccacaa
aatggacaaaccggtattccccagatgagaccacagccaggtcagcaaccatcagcaaac
agacaacgttttggaggattctctgccatgtcaggtctaggaaatcaaggcggcaacatg
ccaacaaacagcgcaccacaaccatcaggtcaaccaagtggccaatcgacaaatcaaatt
acaaaccctagcatgccacaaaacagtatgccaaatggaattaattctggtatatctgga
agatttcctatgcctaatatgttccaaaataacatggtcggaaggccgggaagaatgcaa
ggaggaatgcagggaatgcaaggaggaatgcaaggaagaatgcagggaatgcaaggagga
atggagggaatgcaaggaggaatgcagggaatgcaaggaggaatgcagggaatgcaagga
ggattgcagggaatgcaaggaggaatgcagggaatgccacgcattttgccgggtatgtcg
ggaggtatgcctggaatgtcaggaggtatgtcgggtatgccaaatggtatttcaggacgt
tttcagggtatgccaagaaggatgccaggaatgcagacaggaccaccacaacaaggagct
ggatccgtccaacagccagatccaagtattccatctttaccagccaatatgccagtccca
gatttacctggcagcaatcaatctcctttacctacatctctaccatcacaaagtactcct
gcaccaacggcttctataccttctctcggtgaccagtccagaccaataccatcctttcaa
gggatacagccgttacccggagcgttccccggagcgttccccggagcgttccacctgcca
cccgtagcgttaccaccaattacagctgttgatccacctgccatgcctggacccatggag
gtgcctggacccattgagctgtctggacccatggatttgccaggatccttcgaattgcca
agtcctcttgacctttcagctccccttgaactttcgggatttcccgcaccttcaagtcaa
ggtctaccaaacccgttttctttgcccgctggaaaaccagaaaataaatccaccttaccg
ggcgcagatctatcaccagagaaagttccgccattcccaggtttgaacctccccggatct
tcaccttctggtcctagaggaagtgctggaatccctatttccatgcgtggacgagctggt
ttcccaattgacgccactgggcctctcccacctccacaagatgttaatgctggcgagcca
gtgtcaaacataacaccaccacctccttcctcttctgacttctctgcaaacgcgctacct
ggacctgatgcgatgcttggcattggaggagcccctcctggattttcacctttggacctt
agtggttttcctggtctagacacttccgcaccatttccaagtttagattctactgcatca
tttccaagttcagactctttgcctattggcggtagcgtggcaagtccgtcatcttcatct
atttcaaacacagatatttttaatgcatcaccagtggatccgttcccttttaataccgcc
ggaactgtgttcagcgatacaggcagtataggaattataccaactgatacaggtagtgtt
ccatctgagcctatccccgaccccgccatagccacacaagttcctgtcccccaagacgtt
ttccaaccaggtcccactgatgtgcttcagaatcctacggagggaatccctatccaagac
gcgccgatcccacagcttcccccacaggttgctactgacaacaacaaagttgccgagaca
caggacccttttccgggactaaatttcccgtccggtccaagtcttctcggaaatccctcc
tccaagacagatattgttaatcctccagatgctatgataccgctgacagagatccctcgt
ccatctgatgccatcattcaaggtctaccagttttcagcagatga
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integrated database retrieval system