Mizuhopecten yessoensis (Yesso scallop): 110448719
Help
Entry
110448719 CDS
T05079
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110448719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myi03021
]
110448719
Enzymes [BR:
myi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110448719
Transcription machinery [BR:
myi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
110448719
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
110448719
NCBI-ProteinID:
XP_021350780
LinkDB
All DBs
Position
Unknown
AA seq
1706 aa
AA seq
DB search
MDTDIAEQRLESLDFRFYLQSEIRSLSVKEITNSQTFDSLAHPCSGGLYDSALGPTDRDD
VCGTCGQNFVHCPGHMGHIVLPLPVYNPVYFSTLYQVLRGSCFNCHRLTVSTLSTILFVK
KMDLLNHGLLAAAGDLEDFVANQTEQFGKNAAAEEVINSNIETKVEAWLAETGKLEEIAS
VKNVEAFKNSEITNFIRSKLMLTSIACPHCKTKKRPIKQENNVKFLLAGKKAAKQKIAVK
KKSMEDTESKKDDEDSLMEMPDMETTLPEEEAEEDQTTVTFDSAEQTYISPSQTHDHLQL
LWKKDGVILKYLFHSLAKVVDDSPDIFFLQVIPVPPSRFRPRVCCIRLLVAGCKMLSVTF
PGCVVSDCWWQDVKCCLLCFQGVLSQIYGTTLMEKLQSCWIQMQNHANSVLDCELDKLAK
EKCPGVKQLLEKKEGLFRKNMMGKRVNYAARSVISPDPCINTNEIGVPEVFAKKLTYAQP
VTPWNIQELRQMVINGPNVHPGACFVMNEDGFKTMLSANDKTQREAVAKQLLTPGANPLA
YRECKKVYRHLKNGDVMLLNRQPTLHRPSIQAHKARVLPGEKTLRLHYANCKAYNADFDG
DEMNAHFPQNELARAEAYTIASTDFQYLVPKDGTPLAGLIQDHMVSGVNLTLRGRFFTRQ
EYCQLVFSALVDKKGPVKVLPPSIIKPYKLWSGKQVLSTIILNSIPAGKEPLNLTGKSKI
TEKSWVTSDPMADLPKEVMEEMGESWVIIRGGELLCGVLDKGHYGPTCYGLIHCSYELYG
GEIAGRLLTYFGRLFTNFLQMIRGFTLGVEDILVTTPADKKRQQAIVESTQFGDDSAKEA
LTLDSETDAKAMLKALKKAHFSPDDVELQMLDQSTKTRTDNTQNAIVKACMPKGLEKLFP
QNNLQLMVQSGAKGSSVNCMQISCLLGQIELEGRRPRPMLSGKTLPSFMAYDTSPRAGGF
VSGRFLTGIRPQEYFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGVYVNYDLTVRDS
DGSVVQFYYGEDGLDILKTGFITPKMYPFLLENRSIVTAVSAPNNKDQTQVSDKGVRKWT
KKIMKWRKHAKKKRSTSQRGSGFLNFCKRSKFPGSEDNRIEKNGRTFGACLMCNEWRALD
DKAKKKYTKYTGGCPDPATAIYFPYEQGGVIPEKFESILKNFSSNELKKVVKDGSIGPAE
FNTMMKQKLMKSLAEPGESVGALCAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREI
LMVASANIKTPAMDIPVYPDPQARQTAKTIQTLFNKVTLAEVLEDISITEYTIVKGRTLA
QRKRVFEIRFKFLPYRLYRERLGVTPASILTFIENTYIKRIIALIKRKMNDGTKRSRVLT
SGRLLKKTVTEEDTSKVDDTGDQQADSDLEDMAGDSNAVADKEKKRHEEEKEYDEDVIEE
DAKDEELEEQVTMDEESDEETNFNIEDDMGSEEAAEGHQNKPKMTAAMRINTVLKSMNVA
EYKFDQKRQEWCQVKLQFGIQHSKVDVLSMLETDAKTAIVHQITGINKCFLTEQMGKEKR
ELHLKTEGINIQELYKYADILDMSQLYTNDIHAMAGTYGIEAASRVIVKEIQNVFGAYGI
EVDYRHLCLLADYMTFEGSYKPFNRKAMETSTSPLQKMSFETTMHFLVKASIHGTKDNLR
NPSSQLVAGRLVSCGTGIVDVLQPFS
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggacacagatatcgctgagcagaggctggagagcctggactttcgtttctatttacag
tccgagatccgtagtcttagtgtgaaggaaattactaattctcagacatttgattcactt
gcccatccatgttcgggtggactctacgattctgctctgggaccgacagatagagatgat
gtttgtggaacatgtggacagaattttgtccactgccctggacatatgggtcatatagta
ctgccccttcctgtttacaaccctgtctacttctccaccctctaccaggttctacgtggc
tcgtgcttcaactgtcatcgtctgactgtctctacgctgtccacaattttgtttgtgaag
aagatggacctcttgaaccacggccttctagcagctgctggagacctggaggattttgta
gccaaccaaacggaacaattcgggaaaaacgctgctgctgaggaagtgattaacagtaat
attgaaacgaaagtggaggcgtggctagcagaaactggaaaactggaagaaattgcttct
gttaaaaatgttgaagccttcaagaactcggaaatcactaattttattcgcagcaagttg
atgctgacttcaattgcttgccctcattgtaaaactaagaagagaccaatcaaacaggaa
aacaatgtcaagttcctgctagctgggaaaaaggctgcgaaacaaaagattgcagttaaa
aagaagtccatggaagatacggaatctaaaaaagatgacgaggatagcttgatggaaatg
ccagatatggagaccacactgccagaagaggaggcggaagaggaccagaccactgtcaca
tttgacagcgcagagcagacgtacatatcccctagccagacccacgatcatctgcaactg
ttgtggaaaaaggatggagtcatcctgaagtacctttttcactccttagccaaggttgtc
gatgactcgcctgacattttcttcctgcaggtcatccctgtacccccgtcaagatttagg
ccgagggtgtgttgtatcagattgttggtggcaggatgtaaaatgttgtctgttacgttt
ccagggtgtgttgtatcagattgttggtggcaggatgtaaaatgttgtctgttatgtttc
cagggtgtgttgtcacagatctatggcactacattgatggagaagctgcaaagctgctgg
atccagatgcagaaccatgcaaattcggtcctggactgtgaacttgacaaactggccaag
gaaaaatgtccaggtgtcaaacagttattagaaaaaaaagaaggcctgttcagaaaaaat
atgatgggaaagcgagtgaactatgctgccagatcagttatctcccctgacccctgtatc
aacacaaatgaaatcggtgttcctgaggtttttgctaagaagctgacctacgctcagcct
gttacgccatggaatatccaagagctgcgccagatggttatcaatggaccaaacgtccat
cctggggcttgttttgttatgaatgaagatggctttaaaaccatgcttagtgccaacgac
aaaacacagagagaagcggtagccaaacagcttctcaccccaggagcaaatcctctagcc
tacagggagtgtaaaaaggtgtatcgtcacttaaagaacggggatgttatgctgctgaac
cgacaacccacgcttcaccgacccagtattcaggctcacaaggcgcgagtcttacctgga
gagaaaaccctgcgactccactacgccaactgtaaggcctataatgctgactttgatggc
gatgaaatgaatgcacattttccacagaatgaactggcaagagcggaggcctatactata
gccagcacagatttccagtacctggtccctaaagatggcacacccttggctgggcttata
caggaccacatggtgtccggggtcaacctcactctccggggacgcttcttcaccagacaa
gagtactgccagctcgtgttctcggccttagtggacaagaaaggcccagtgaaggtgcta
cccccctcaatcatcaaaccctacaaactctggtcaggaaaacaggttctttccacgatt
attttgaactcaataccagctggtaaggaacctctcaacttaactgggaaatccaagatt
acggagaagagttgggtgacctctgaccctatggcggatctaccaaaggaggtcatggag
gagatgggggagagttgggtgataattcgtggtggagagctcctttgtggtgtactggac
aagggtcattacgggcccacctgttatggacttatacactgctcttatgagttgtacggt
ggggaaatagctggtaggttgttgacctatttcgggcgtttgttcaccaacttcctgcag
atgatccgaggtttcacacttggcgtggaggatatcctggtcacaacaccggcagacaag
aagaggcaacaagctattgtagagtctacacaatttggggatgactcggcgaaagaggct
ttgaccttggatagtgagactgatgcgaaagccatgttgaaggccttgaagaaggcccac
ttcagtccagatgatgtggagttgcagatgctggaccagagcaccaagaccaggactgat
aatactcagaatgccatcgtaaaggcctgtatgccaaaaggattagaaaaactgtttcct
cagaataatctacaactgatggttcagtcaggagctaaaggatcctctgtgaactgcatg
cagatatcctgtctgcttggtcagatagagttagaaggacgtcgccccagaccgatgctg
agtgggaaaacactgccctcattcatggcctatgacacatcgcctcgtgctggagggttc
gtgtcgggacgttttctcacagggatccgacctcaggagtacttcttccattgtatggct
ggacgagagggtctcatcgacacagctgtcaaaacaagtcgcagtggatacctacagaga
tgtctaattaaacacctggaaggggtgtacgttaactacgacctgacagtcagagacagt
gatggcagtgtggtccagttttactatggcgaggatggactggacatcttaaagaccggg
tttattactccaaagatgtatcctttcctcttggagaaccggtccatagtgaccgcagtg
tcggcacctaacaataaggaccagactcaagtcagtgataaaggggtacgcaagtggacc
aaaaagataatgaaatggaggaaacatgcaaaaaagaaaaggtccacaagccagagaggt
tctggttttctgaacttttgcaagaggtctaagtttccaggatcagaagacaatcgtata
gagaaaaacggacgcacttttggggcatgtcttatgtgtaatgagtggagggcacttgat
gacaaggcaaagaaaaaatacaccaagtacacaggaggatgtccagaccctgcaacagcc
atctatttcccctatgaacaaggtggtgtcatccctgagaagtttgagtctattttaaag
aacttctcaagcaatgaactcaaaaaggtagtgaaggatgggtcgatagggccggcagag
tttaacactatgatgaagcaaaagctgatgaagtcactggcagaacctggcgagtctgtc
ggggccttgtgtgcccagtcaattggggagccatccacacagatgacgttgaacactttt
cactttgctgggcgaggtgagatgaacgttactttgggaatcccacgtctacgggagatc
ctcatggtagccagtgccaatataaagacgcccgccatggacatcccagtgtatcctgac
cctcaggcacgacagactgctaaaaccattcagactctcttcaacaaggtcaccctagct
gaggtgcttgaagacatcagtatcaccgagtacacaatcgtcaaaggcagaaccctggcc
caaaggaagcgggtgtttgagatccgtttcaagttcctgccttaccggctgtacagggaa
cgcctaggagttactccagcctccatcctcaccttcatagagaacacctacatcaaacga
atcattgctctcatcaaaagaaaaatgaatgatggtacaaagagaagcagggtgttgaca
tctgggaggttactgaaaaaaacagttacggaggaggacacgtctaaagtggatgatacc
ggtgatcagcaggcggactccgatctagaggatatggctggagacagtaacgcagtggcc
gacaaggaaaagaagagacacgaggaagagaaagaatatgatgaagatgtaatcgaagaa
gatgcaaaagatgaagaactggaggaacaggttactatggacgaggagagcgatgaagag
acaaacttcaatattgaggatgacatgggctctgaggaagctgctgaaggtcaccaaaac
aaacccaagatgacggcagccatgagaataaatactgtcttaaaatcaatgaatgttgct
gaatataaatttgaccaaaaaagacaagaatggtgtcaggtgaaactccagtttggtata
cagcatagtaaggtggatgttttgtcgatgttggagactgatgccaagacggccatagtc
caccagatcacgggaatcaacaagtgtttcctcactgaacagatgggaaaagaaaagcgt
gagctccaccttaaaacggagggcataaatatacaggaactctacaagtatgctgacata
ctggacatgtcccagctctacaccaacgacatccacgccatggctgggacatatgggata
gaggctgcctccagggtcattgtcaaggaaatacagaatgtgtttggcgcctatggaata
gaggtggactatcgccacctgtgtctactggcagactacatgacctttgagggatcctac
aaaccatttaacaggaaagccatggagaccagcacatcacccttacagaagatgtccttt
gagaccaccatgcattttcttgtgaaggccagcatccatggcaccaaagacaatctacga
aacccatcgtctcagttggtagctgggagactcgtgtcctgtggcactggaatagttgat
gtcttgcaaccctttagctga
DBGET
integrated database retrieval system
