Mizuhopecten yessoensis (Yesso scallop): 110449374
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Entry
110449374 CDS
T05079
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110449374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
myi04131
]
110449374
Membrane trafficking [BR:
myi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110449374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
Clathrin
TPR_VPS8_2
WD40_CDC20-Fz
zf-RING_Vps41
zf_RING_Vps8_fungal
WD40_Prp19
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_HPS5
Prok-RING_1
Beta-prop_EML
Phage_tail_terminator_7
Beta-prop_RIG_2nd
WD40
Motif
Other DBs
NCBI-GeneID:
110449374
NCBI-ProteinID:
XP_021351893
LinkDB
All DBs
Position
Unknown
AA seq
1393 aa
AA seq
DB search
MAEATEGGEAGASSANLLDFDLQLDDAEFDLPSVENPTLESILNEPDDQESMLDEDELSM
PSSLQLFRESGDTSSLSSQDSMLSDRPRNREKKRKGIHYAIHGSVLKPSKLKSISAQLLS
AADRVDAGMPTAMAVSAQIAIGTSHGLVLIFDPKQVLKWCLGSTAVGSQYGSVSAISFNR
DCTRLLSGFAKGQITMWDLTNGKLLRTITEAHPPGTAVLHIKFTDSLVLAICSDSGGSVF
ELEFKRLIGVRTCESKCLFSGSRGEVCTIEPLHMNLTIKDHPMQDVMVIAMATMSKVLLV
TIRPQLKVFFTHQLKGDPGTLPLLAWQFVIIQVSESDRVIDPVLAFARDSTIHFYQVICN
NGQDIRCSGLQKITVQYKILGIHWLNTRTLVVMDTTEKMHVIDVRSEDEIEVLDVSEVQM
VYNTSFFKSLANGGNVSQALAFAGERACYQTLVSHGGQLFLLGTKTVHVYALRNWRDRID
VLVKQNRYQDALVLALSFYEGKAKGVVGLTGSHRKKQEMVSHLMLDLLFDFVDLSMTALC
PEQGKIEELEEHYQGIVPVCVDYCLHLDRTDILFGRIFERFSADMIAHGVFLECLEPYIL
VDKLTSIPPTVMKDFVDNYEGKGMLENVEACIVHLEITSLDIHQVVSLCWGHGLYDAIIY
VYNRGMNDYTTPLEDLISTLRAAVDTGKQLSDNQIRLGNKLLVYISCCLAGRAYPLGDIA
DDFVTEVKESVYQCVACLHTKQYSDDEPAYPHLRTLLQFDTREFLNVLALAFEESEFNSD
QGVQKRQRMVDVLLQVMVESVGFTPTQVGILFTFLARQMARHENTIVVNRVLFDQVLEFL
SNPSDESRHEERQQALMELLHAGGLQQIDEDRLLYLAENAKFYRVCELLYEKQHKFGKIL
SCYLRDYSRKYHSFSYINSIVNSERFTELEKEDVRQEAMAHLQELVAIDCKQAAQIVITA
LSGNLSAVVKELNNNPAVLFEFLQGVMSYRDSMGSAIHQERQVVVEPHIFELYIDLMAQH
RPNDVYSYIKLNEGYRLEQTLEICRKHKLSNATAYLLEKAGDIQGAFGIMLENLQTKLKN
VTDVLLGATVQKDAIMLFSEVQLEVVVIVQLCQRNSGKMDEAQRELLWFPLLETMMSPQR
KLKDVQNKELLEEFKEPTQHVLTSMSEYIQLPAILQKIMQDPAYSTGKFGEVKDLILGML
EKYNYEKTLRRTCKNLLNHDIHVHLRSLTSVAAKGFVTKGDNCDRCNKPFVSQQSDVDHV
IVFRCGHGYHLGCLRSVGSVHMLEGEELWACYLCSHSKRGQVHSSRFHRSLSTATQSAQH
TLKDKPKEMSLDPQHLQAIDFVRRSMRTPSRIAILTELSKPDQSSRASRAGSTIFNEENF
RLKLAPPPAMEVS
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcaacagagggaggggaagctggagcttcgtcggctaatttacttgatttc
gacctccagttggatgatgccgagtttgacttgccctcagttgaaaatcctacgcttgaa
agtatcttaaatgagcccgatgaccaggagtccatgttggatgaggacgagctgtccatg
ccgtcttctctccagctgtttcgggagtccggagatacctcttccctgtcaagtcaggac
agtatgctctctgacagaccaagaaatcgggaaaagaaacgtaagggaattcattatgca
atccatggatctgtcttgaagcccagcaaactgaagagtatctctgcccagttactgtct
gccgctgatcgtgtggatgctgggatgcctacagctatggctgtgtccgctcagatagcc
attggaacttcacatggactggtgcttatctttgaccccaaacaggttctcaagtggtgt
cttggcagcacagccgtcgggtcacagtacgggtctgtctccgccatcagcttcaacagg
gactgcacacgccttctcagtggctttgccaagggacagattacgatgtgggaccttacc
aacgggaaacttctacggacgataactgaggcccatcctcctggaacggcagtcctacac
atcaagttcacagatagtcttgttttggccatctgtagtgacagcggaggctccgtgttt
gagctggaattcaagcgtctgattggtgttcgcacgtgtgaatcaaagtgtctgttttct
ggaagtcgaggcgaggtatgcaccattgaaccgctccacatgaacctaaccatcaaagac
caccccatgcaggatgttatggttattgccatggcaacgatgtcaaaggtacttctagtg
acaatacgaccacagctgaaggttttcttcacccatcagttaaagggtgacccagggact
ctccccctcctggcctggcagtttgtcatcatccaggtgtcggagagtgaccgagtgatt
gatcccgttctggcctttgcccgcgactctaccatacatttctaccaggtgatatgtaac
aacggccaggatatccgctgttcagggctacagaagattacagtacagtacaagatcctt
ggtatacattggctgaatacacgaacacttgtcgtcatggatactacagaaaagatgcat
gtgatcgacgtgagatcagaagatgagatcgaggtactggatgtgtccgaggtacagatg
gtctacaatacgagcttcttcaagtccctagccaatggtggaaatgttagccaggctttg
gcctttgctggtgaacgggcgtgttaccagacattggtcagtcatggtggtcagctgttc
ttactcggaacaaagacggtccatgtatacgctctgcgtaactggagagatagaatagat
gtgttggtgaaacagaaccgataccaagacgccctagtgctcgccctgtccttctacgag
gggaaggccaaaggtgtggtcggactgaccgggtctcaccgcaaaaaacaggaaatggtg
tctcaccttatgctggacctgctgtttgattttgttgacctctccatgacagcgctgtgt
cccgaacaaggcaagattgaggaactggaggagcactaccaggggatagttccggtctgt
gtagattactgccttcacctcgacagaaccgatattctgtttggacggatttttgagagg
ttttcggcagacatgattgcccatggtgtcttcctcgagtgtttggagccgtacatcctg
gtggacaagctcacctcgatccctcccactgtgatgaaggactttgtggataactatgag
ggcaaaggcatgctggaaaatgttgaagcatgtatcgtccacctcgaaatcacaagtctg
gacatacaccaggtggtgagtctgtgttggggacacgggttgtatgacgccattatctac
gtgtacaaccgagggatgaatgactacactacaccgttagaggaccttatctccacactc
agggcggctgtcgacaccggcaaacagctgtcggacaatcagattaggcttgggaacaaa
ctgcttgtgtatatcagttgctgtttggcaggccgagcctatccactgggagatatagct
gatgacttcgtgacagaagttaaagaaagtgtttaccagtgtgtcgcctgtttacataca
aaacagtactcagatgatgagccagcctatcctcatctgaggacactgttacagtttgac
actcgagagttcctcaatgtcctggcactggcctttgaagaatcagaattcaacagcgac
caaggggtacagaagaggcagagaatggtggatgtcctgttacaggtcatggtggagagt
gtcggcttcacgcctacacaggtagggatcctgtttaccttcctggccagacagatggca
cgccatgaaaacaccatcgtcgtcaaccgtgtgctgtttgatcaggtgttagagttcctg
tcaaacccgtctgacgagtctcgccacgaggagagacaacaggcactaatggaactactg
catgctgggggactgcaacagattgacgaagaccggctcctgtatcttgccgaaaatgca
aaattttatcgagtctgtgagctcctttatgaaaaacaacacaagtttggtaaaatcctg
tcttgttacctaagggattattctagaaagtatcactcgttcagctatatcaacagtata
gtgaacagtgagagatttactgagctggagaaggaagatgtccgtcaggaggccatggct
catctacaggagttggtagctatcgactgtaaacaggcagctcaaattgtgataacggca
ctgtccggcaatctgtccgctgtggtcaaagaactaaacaacaatccagccgtcctgttt
gagttcctgcagggggtcatgtcttacagagattccatgggcagcgcaatccaccaggag
agacaagtagtggtagagcctcatatctttgagctgtacatcgacctgatggctcagcat
cgtcctaacgatgtctacagctacatcaaactcaacgagggctacagactggaacagaca
ctagagatatgcagaaagcacaagctgtcgaatgcaacagcctatttactggagaaggca
ggagacattcagggagcgtttggtattatgttggagaatctacagactaagctaaagaac
gtaaccgatgtattactaggagcaacagttcagaaagatgccataatgctgttctctgag
gtgcagcttgaggtagtggtcattgtccagctctgtcagaggaattctgggaaaatggac
gaggcccaaagggagttgctgtggtttcctctgttagaaaccatgatgtctccccaaaga
aaacttaaagatgtacaaaacaaggagctactagaagaattcaaagaacctacacaacat
gtgttgacaagtatgagtgaatacattcaactcccagcgattttacagaagattatgcag
gatcctgcctatagcacaggcaagtttggcgaggtcaaggatttgatactaggcatgctg
gaaaagtataactatgagaagacactaagaagaacatgtaagaatttattgaatcatgac
atccatgttcacctgcgaagtctgaccagcgtggcagccaagggtttcgtgacaaaggga
gataactgtgatcggtgcaataaacctttcgtgtcccagcagtcggatgtggatcacgtc
attgtgttcaggtgtggccacggttaccacctgggatgtctacggtcagtgggctctgtc
cacatgctggagggcgaggagttgtgggcatgttatctgtgtagtcactctaaacgaggg
caggtccacagcagtcgtttccaccgatcactctccactgctacacagtcggcacagcat
accctcaaggacaaaccaaaggagatgtccttggatcctcaacatctacaagccattgat
tttgtacgccggtccatgaggactccatcaaggattgccatattgacggagctgtcaaaa
cccgaccaatcatctcgggccagcagagctggatcaactatatttaacgaagagaatttc
cgactaaagttagccccgccacctgcaatggaagtttcctga
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