Mizuhopecten yessoensis (Yesso scallop): 110449530
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Entry
110449530 CDS
T05079
Name
(RefSeq) high mobility group-T protein-like
KO
K10802
high mobility group protein B1
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03410
Base excision repair
myi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110449530
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110449530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
myi03036
]
110449530
03400 DNA repair and recombination proteins [BR:
myi03400
]
110449530
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
myi04147
]
110449530
Chromosome and associated proteins [BR:
myi03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
110449530
DNA repair and recombination proteins [BR:
myi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
110449530
MMR (mismatch excision repair)
Other MMR factors
110449530
Exosome [BR:
myi04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
110449530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
Use1
Ccdc124
ANAPC15
YABBY
NOA36
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
110449530
NCBI-ProteinID:
XP_021352136
LinkDB
All DBs
Position
Unknown
AA seq
224 aa
AA seq
DB search
MVGRGGDPAKPKGRMSSYAFFVQTIREEHKKAHPGEKVVFAEFTKKCAEKWKTMSAQEKM
RFEDMAQKDKVRYDGQMRSYVPPKGEKKSRKRTKDPNAPKRSLSAFFFFCADERGNVKAK
NPNWTVADVAKDLGKQWEKCPNKPCYEQKAIADKKRYEIQNEQYKQCKSFKDVPLEQLMP
AKKPKAAPPQVAAVQEEEDDDDDEEEDDDEDEEDDDEEEEEDDE
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggttggaagaggtggtgatccggctaagcctaaagggcgcatgtcatcttatgcgttc
tttgtacaaacaatccgagaggaacacaagaaagctcaccctggggaaaaggttgtgttt
gcagaattcacaaagaagtgtgctgagaaatggaagacaatgtcggcccaggagaaaatg
cggtttgaagatatggctcagaaagataaagtgcgctatgatggccagatgcgatcatat
gtacctccaaagggcgagaagaagagcagaaaaaggacgaaggaccctaatgcacctaag
cggtcattgtctgcattcttcttcttctgtgctgatgagagaggaaatgtgaaggcaaag
aaccccaactggacggtagcagatgtggccaaggatctgggtaaacaatgggagaaatgt
cccaacaaaccctgttatgaacagaaggccattgcagacaagaaaagatatgaaatacaa
aatgagcagtacaaacaatgcaagtcctttaaagatgttccccttgagcaactgatgcca
gctaagaaacccaaggctgcacctcctcaagtggcagcagtccaagaggaggaggatgac
gatgatgatgaggaggaagatgatgatgaagatgaggaggatgacgatgaggaggaggaa
gaggatgacgaatag
DBGET
integrated database retrieval system
