Mizuhopecten yessoensis (Yesso scallop): 110449915
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Entry
110449915 CDS
T05079
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110449915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myi03021
]
110449915
03036 Chromosome and associated proteins [BR:
myi03036
]
110449915
Transcription machinery [BR:
myi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110449915
Coactivators
SAGA/TFTC/STAGA complex
110449915
Chromosome and associated proteins [BR:
myi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110449915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
110449915
NCBI-ProteinID:
XP_021352756
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MATANFIDDLITSEIDESAVSALVGALEGQLASPTHKDNSQSISESSINNNHITTASTPV
ACTASSFNIVQTNVTQGLKGLSLPNSVTVNSVTSPLVKLTQSDPQIIGINSIINSNNVAA
SNNNTQNNRESPASNSSRVVNNQHAVRIIPNTQPHVNSRSSPLPQAIVNSNSLVHTNHIP
SANSPLIDLNRTTHSPNVNTRIVISKPGETVVDQKSVIIPQVTSSAGGITIPQQYSSHQD
VVLKPGHIILKHDNVNSGNVNAVKQERVTALKQEGSMNTQQHSQFLIKNEQHTTRSPISN
VKHEGCPTIQTIQTVHGTQHIQTGSVPSAAGSQITQATNVHIVNAPIKGGVAGNPSVITV
RTPGQAQPGQVVMRQQTPHSSGVPMHVVSVSGSNVVPRFTNSKGAVARVATASPARQQQI
NIAPRPGTTAGTITLPQGMLPHGGMLMKNEQGQFVIVTANQGGVQQAVSTTMASSTTGHR
IQYVRPPTTVQAHARPPTTQIVTIQHPSGTPIAGQHQTVLRQTVPSSGAPALVSTASSQV
VQTVRATNPSMAPHTSTAPGTTQSSGQVQQQPLDNVKKCKNFLSTLLKLAAGQPKETVKN
VRELIQGLIDGKVEPEAFTERLQAELKSSPQPYLVPFLKKSLPLLRRSLIQNKMSIEGVR
APPVSVLQQNVMPTAATSVGQTQNQIPHLLHTAKSQQGMIQVQHIQKGVAHQRGSLPKTV
VTMAGRSQVAHHGVQGLPTVSTIQGQTKTHGSTAGHREKPKYDSLKDDDDINDVATMGGV
NLSEESKNILATNADFIGTQIRSCKDEAFLHHATLQSRISAIAKKHGVDEVSSDVINLVS
HAAQERMRDVLEKLATIAEHRIEIYKMNDRFELTKDGKSQLKFIEELDKLEKKRHEEQEW
EKIMKAAKSRSKHEDPEQQKIKQKAKELQQAEIERLRQEEANLTALAAIGPRKKRKTDFG
ESSQGSSGGSNLSNGLGSSSSRSTSRPRIKRVTLRDVLFFMEQERSMCKSKVLYKTFLK
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgccaattttatcgacgacttgattacctctgagatagatgaaagtgccgtt
agtgccttagttggtgcattagaaggacagttggcttcccctacacacaaggataactca
cagtcgatatcagaatcttctataaataataatcatatcactacagcaagcactccggta
gcttgcactgcttcatcattcaacattgtacagaccaatgtaacacagggactaaaaggt
ttgtctttaccaaatagtgtgactgtgaactctgtcacgagtccgttggtgaaactgacc
caatcagatccccagatcattggtataaattccataataaactcaaacaatgttgcagca
tccaataacaatactcaaaataacagggaatcacctgcatctaactcaagcagagttgta
aacaaccaacatgctgttagaataatacctaacactcagcctcatgtgaattcaagaagt
tccccattaccacaagcaattgtcaattctaatagtttggtgcatacaaaccatattccg
agtgcaaattcaccacttatagatctaaataggactactcattctcctaatgtaaataca
agaattgtcatttcaaaaccaggtgaaacagtagttgatcagaaatctgtgataatacca
caagttacatcaagtgctggagggatcactattccacaacaatattctagtcatcaggat
gtagtattaaaaccaggacatattattttgaaacatgacaatgtgaactctgggaatgta
aatgctgtaaagcaagaacgtgtaacagctctcaaacaggaaggctctatgaacactcaa
cagcatagccagtttttaattaaaaatgagcaacatacgacgagaagtccaatttcaaat
gtgaaacatgaaggctgtccgacaattcagactatacagactgttcatggaacgcagcac
attcaaaccggatctgtaccttcagctgctggaagtcaaatcacacaggcaactaatgtt
catatagttaatgcaccaattaaaggtggtgttgcagggaatccaagtgttattacagtg
aggactccaggacaagcgcagcctggtcaggttgtgatgcgtcaacaaacgccacattca
agtggtgtgcctatgcatgtggttagtgttagtggttccaatgtggtgccaagatttaca
aacagtaagggagcagtggcacgggtggcgactgcttctcctgcacgacaacagcaaatc
aacatagcacctcggccaggaaccacagcgggaactatcacgttgcctcaagggatgtta
ccacatggtgggatgttgatgaaaaatgagcaaggccagtttgttatcgtcactgctaac
caagggggagtgcagcaggcagtatctacgacaatggctagttctacaacagggcatcgc
attcagtatgtcaggccccctaccacagtccaggcacatgcacggcctcccaccactcag
atagtcaccatccaacacccgtctggtacccccatcgcaggccaacaccagacagttctc
cgtcagaccgtcccttcctcaggagcccctgccctcgtgtctacagcatcaagccaggtt
gtgcagacagttcgggcaaccaaccccagtatggcaccacacacctcaacagctcctggc
acaacccaaagttctggtcaggtccaacaacaaccactagataatgtaaaaaagtgtaaa
aacttcctctcaacattgctgaagcttgcagctggacaacccaaagaaacggtcaaaaat
gtcagagagctcatccagggtctcattgatgggaaagtagagcctgaagcgttcacagaa
agattacaggctgaactgaagtcatcaccacagccatacctagtccctttcttgaagaaa
agcctgcctctgttgcggaggtcgctgatacagaacaaaatgtctatagaaggagtaagg
gcacctcctgtgtctgtcctgcagcaaaatgtgatgcccacagcagcaacgtcggtgggc
caaacacaaaaccagatccctcatctcctacacacagccaaaagtcagcaggggatgata
caggtgcagcatatacagaagggtgtggctcaccagaggggcagcttaccaaagacagtg
gtgacaatggctgggcggagccaggtggctcaccacggggtgcaggggctccccacagtc
agcaccatacagggacaaacaaagacacatggcagcacagcgggtcaccgcgaaaaaccc
aaatacgactccctcaaagatgatgatgacatcaatgatgtggcaactatgggtggtgtg
aatctgtccgaagaatccaaaaatatccttgccaccaacgcagatttcatagggacacag
atacgctcctgtaaagatgaagcctttctccaccatgcaaccttacaaagtcggataagt
gctatagcaaagaaacatggtgtagatgaagtgtcgtcagatgtgatcaatcttgtatct
catgccgctcaggaacggatgcgagatgttttagaaaaattagcaacaatagcggaacat
agaatagaaatatataagatgaatgataggtttgaattgaccaaggatgggaagtctcaa
ttaaaatttatagaagagctggacaagttagaaaagaaaaggcacgaggaacaagaatgg
gaaaaaataatgaaggcagccaagagccgatcaaaacatgaagaccctgaacagcagaaa
attaaacaaaaggccaaagagttacaacaagctgagatagagcggctgagacaagaagaa
gcaaatcttacagcattagcagcaataggtcctcgaaagaaacgcaaaacagactttggg
gaatcaagtcagggaagctctggagggtcgaatctgtccaatggtcttggatcatcgtca
tctagatctacatccagaccaaggattaaaagagtaacattaagagatgtccttttcttc
atggaacaagaacgatctatgtgcaagtccaaggttctatacaagacatttttgaaatga
DBGET
integrated database retrieval system
