Mizuhopecten yessoensis (Yesso scallop): 110450130
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Entry
110450130 CDS
T05079
Name
(RefSeq) nuclear pore complex protein Nup50-like
KO
K14295
nuclear pore complex protein Nup50
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110450130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110450130
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110450130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
EVH1_PP4R3
UPF0508_C
Motif
Other DBs
NCBI-GeneID:
110450130
NCBI-ProteinID:
XP_021353084
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MAKRTATTELTDRNWDHEDEPEEAGQFVQASSNTIKQRQIIKAKRKSSTAEGGSRSFTGF
SGFSFKPTSTSTPFSFNVKSVTNGQSETKETAASVIPPVKGVPAPNPVKSTPASNGSAKT
ESGDSVTCNAYSENLKKLNESVLSWIQKHVEKNAYCILTPIFKDYEKHLDELEKEKSEKT
GKNNGMESKTATTFSTVTTGVEPALSSTKPAFSFGTSATATPSSGFSFGSTKAASAPSDG
TKGANGGSTFGATVTGFSGFNLQSNLGTKPSPFFAVGQSTGAMGSSQDAAEEEYEPPKPE
STEVKEEGALHTIKCKLFYQKDGAWKERGVGFLHLKKADDKIQLVVRADTSLGNILLNII
LSSSLPLSRQGKNNVSIMCVPNPPLDTKEDPKATPMLIRVKTPEDADTLLEKMKELRK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgaacagccacaacagaactgacagacaggaattgggaccatgaggatgag
ccagaggaggcaggacagtttgtacaggcctcatcgaacacaatcaaacagagacagatc
attaaagccaaaagaaaaagcagcactgcagagggaggaagcaggtcattcaccggattc
tcaggtttcagcttcaaacccacatcaacaagtaccccattcagcttcaacgtcaaatcg
gtgacaaatggccagtcagaaacaaaagaaacggcagccagtgtgattccccctgtcaag
ggggttccagcccccaacccagtcaagtccacaccagccagtaatggctcagctaagaca
gaaagtggagatagtgtcacctgcaatgcatattcagagaatctgaagaaacttaacgag
agtgtgttgtcatggatacagaaacatgtggaaaaaaatgcatactgtattttgactcca
atattcaaagactatgaaaaacatcttgatgaacttgaaaaggagaaatctgagaaaaca
ggcaagaataatgggatggaaagtaagacagccactactttttctactgtcactacagga
gttgagcctgctttgtcctccactaaacctgcattctcattcggaacgtctgcaacagca
acacccagcagtggattcagcttcgggtctacgaaggctgcctcagcaccatctgatggt
actaagggagctaatggaggctccacattcggcgctactgtcactggattttcgggattt
aatctacagtctaatcttggaactaaaccttcaccgttttttgctgttggtcaatctaca
ggtgctatgggttcctcacaagatgcagcagaggaagagtatgaacccccaaagccagaa
tcaacagaggtcaaagaggaaggagctttacacacaatcaaatgcaagctgttctaccag
aaggatggggcctggaaagaacgtggagtagggtttctacatctaaaaaaggctgacgac
aaaatacagcttgtagtacgagctgataccagcttagggaacatcttattgaatataatt
ctatctagctcactacccttgagtcgccagggcaagaacaatgtgagcataatgtgtgtt
cccaacccgccccttgacaccaaggaagatcccaaggccactcctatgcttatcagagtc
aagacccccgaagatgccgacacactccttgaaaaaatgaaggaactaaggaaatag
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